Poecilia mexicana (shortfin molly): 106924304
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Entry
106924304 CDS
T08022
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106924304 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmei03041
]
106924304 (prpf8)
Spliceosome [BR:
pmei03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106924304 (prpf8)
Complex C
U5 SnRNP specific factors
106924304 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
106924304
NCBI-ProteinID:
XP_014853420
Ensembl:
ENSPMEG00000004051
UniProt:
A0A3B3Y639
LinkDB
All DBs
Position
Unknown
AA seq
2358 aa
AA seq
DB search
MAAAFPYRGVPPGMPPGVPPGVPPVVPPGVPPGIPPVVPPPAPVPDYMSEEKLQEKARKW
QQLQAKRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPH
AVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRD
RRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQMELDPEEDSSVVDWFYEHQPLKDNP
KFVNGTTYRRWQFTLPMMSTLYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGP
KFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNV
VFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPEFVEPFLKETPLYTDN
TANGIALLWAPRPFNLRSGRTRRAIDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLN
ALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLH
LDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADG
LQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLVYYRFNTGPVGKGPGCGFWSAGWRVW
LFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMM
PEGIKQNKARTILQHLSESWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYN
RERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWL
ESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEA
LSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFP
PWIKPADTEPPPLLVYKWCQGINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLL
RLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHR
ASEMAGPPQMPNDFLSFQDTTTESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEH
PDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSV
YSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESM
QRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQT
RIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGM
SHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIP
RINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQA
LGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLW
WSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVF
DQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTT
QKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGN
WFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQII
WFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLA
KWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACL
KVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPD
KTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEIS
APSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRA
ISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNP
QVKEIRCIVMVPQWGTHQTVHLPNQLPSHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHA
KIMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYE
RVQMLLSDRFLGFFMVPGQVSWNYNFMGVRHDPNMKYDLQLSNPKEFYHEVHRPSHFLNF
ASLQEGEIYNADREDMFG
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcctttccctacagaggagtccctccagggatgccaccaggtgtgcctcca
ggtgtacctccggttgtcccccctggtgttccaccaggcattccccctgttgttccccct
ccagcgcctgttccagactacatgtctgaggaaaaactccaggaaaaagcaaggaaatgg
cagcagctgcaggccaaacgctatgcggagaaaaggaagtttggctttgtggatgcccag
aaggaagacatgcctcctgagcacgtccgcaagatcataagggaccatggagacatgacc
aatagaaagtttcgccacgacaaaagagtctacctaggcgctctgaagtacatgcctcac
gcagtgctgaagcttctggaaaacatgccgatgccctgggagcagatcagagacgtccct
gtgctctaccacatcaccggagccatttcctttgtgaatgaaatcccttgggtcatagag
cctgtctacattgcccagtggggcaccatgtggatcatgatgcgtcgtgagaagcgtgac
cgacgacacttcaagaggatgcgctttccgccgtttgatgacgaagagccgccgctggac
tacgccgacaacatcctggatgtggaacctctggaggccattcagatggagctcgatcct
gaggaagattcttcagtcgtggattggttctatgagcaccagcccctcaaggataatccc
aagtttgtgaacggcaccacctaccgtcgctggcagttcacgctccccatgatgtcgaca
ctgtatcgtctggccaatcagcttctaacagatttagtggactttaattacttttacctg
tttgacctgaaggccttcttcacttcaaaagccttgaacatggccatcccgggaggacca
aagtttgagccactggtcagagacattaaccttcaggatgaagactggaacgagttcaac
gacatcaacaaaatcatcatccggcagcccatcaggaccgagtacaagattgctttcccc
tacttgtacaataacctgccgcaccatgtgcatcttacctggtaccacacacccaatgtg
gtatttatcaagactgaggacccagatcttccagcattctactttgatccgctgatcaac
cccatttctcacagacattcagtcaagagccaggagcctctccctgatgatgatgaggag
tttgagcttccagagttcgtggagcctttccttaaagagacgccgctctacactgacaac
acagccaatggcatcgctctgctttgggctccaagacctttcaacctgcgttctggccgc
acaaggcgcgccatcgatatccccctggtcaaaaactggtaccgagagcattgccctgcg
ggacagccggtgaaagtacgcgtgtcgtaccagaaactgctgaagtactacgtactcaac
gctctcaaacacagaccccccaaggctcagaagaagaggtacctgttccgctcctttaag
gcaacaaagttcttccagtccaccaagctggactgggtggaggtggggctgcaggtctgc
aggcagggttacaacatgctcaatctgctcattcatcgcaagaacctcaactacctgcat
ctggactacaacttcaacctgaagccagtcaagacgctcaccacaaaggagagaaagaag
tccaggttcggcaacgccttccatctgtgcagggaggtgctacgtctgagcaagctggtg
gtggacagccatgtgcagtacagactgggaaatgttgatgcttttcagctggctgacggg
ctgcagtacatctttgcacacgtgggacagctgacgggcatgtaccgctacaagtacaag
ctgatgagacaaatccgtatgtgcaaagacctgaagcatctcgtctactaccgctttaac
actggtcctgtgggcaaagggccaggctgtggcttctggtctgctggctggagagtgtgg
ctcttcttcatgcgggggatcactccgctgctggagaggtggctcgggaacctgctggcc
aggcagtttgaaggacgtcattccaagggcgtggccaagactgtgaccaaacagcgcgtg
gagtcgcactttgacctggagctgcgtgctgcagtgatgcacgacatcctggatatgatg
cctgaaggcatcaagcagaacaaggccagaaccatcctgcaacacctcagtgagtcctgg
aggtgctggaaggccaacatcccatggaaggtgcctggtctcccgactcccattgagaac
atgatcctgcgatacgtgaaggccaaagctgactggtggactaacacggctcactacaac
agagagcgaattcgccgcggagccactgtggacaaaacggtgtgcaagaagaacctgggc
cggctgactcgtctgtacctgaaggctgagcaagagagacagcacaattatctgaaggac
ggaccttacatcactgcagaagaggctgtggccatttacacaaccactgtgcactggctg
gagagtcggcgcttctctcccatacctttccccccactgtcctacaaacacgacaccaag
ctgctgatcctggctctggagaggctcaaagaggcatacagtgtgaaatctcgtctgaat
cagagtcagagggaggagctgggcctgatagagcaggcctacgacaacccgcatgaagcg
ctttccaggatcaaacgtcacctgctcacacagagagctttcaaagaggttggtattgag
ttcatggacttgtacagccacctggtgcctgtgtacgatgtggagcccttggagaagatc
accgatgcgtacctggaccagtacctgtggtacgaggcagacaagaggcgacttttccct
ccctggattaaaccagctgacactgaacctccgccgcttctggtctacaagtggtgccaa
ggcatcaacaacttgcaggatgtgtgggaaacggctgagggcgagtgcaatgtgatgctg
gagtctcgctacgagaaaatgtacgagaagatcgatctgactttgctcaacaggctgctg
cgtctcatcgttgaccacaacattgctgattacatgacggccaagaacaacgtggtgata
aactacaaggacatgaaccacaccaactcttacggcatcatcaggggactccagttcgcc
tcgttcatcgttcagtactacggtcttgtgatggacctgctggtgctcggtttgcaccgt
gccagcgagatggccggcccaccccagatgcctaacgacttcctgagtttccaggacacc
accaccgaatcggcccatcccatccggctgtactgtcgttacatcgaccgcattcacatc
ttcttcagattttctgctgatgaggccagagacctgattcagcgttacctgacggagcac
ccggaccccaacaacgagaacatcgtgggatacaacaacaagaagtgctggcctcgtgac
gcccgcatgagactgatgaaacacgacgtcaacctcgggcgagcggtcttctgggacatc
aagaaccgcctgccgaggtctgtgaccacagtccagtgggagaacagcttcgtgtcggtc
tacagcaaagacaaccccaacctgctcttcaacatgtgtggcttcgagtgccgcatcctt
ccgaagtgccgcaccagctacgaggagttcactcacaaagatggcgtctggaacctgcag
aatgaggtcactaaagaaaggacggcccagtgtttcctgcgtgtggatgatgaatccatg
cagcgcttccacaacagagtgcgtcagattctcatggcttctggatccaccactttcacc
aagatcgtgaacaaatggaacacggctctgatcggcctgatgacctacttccgtgaggct
gtggtcaacacacaggagctgctggaccttctagtgaaatgcgagaacaagatccagacc
cgtatcaagatcgggctgaactccaaaatgcctagccgtttccctccggttgtcttctac
actcctaaagagctgggtggtcttggcatgttgtccatgggtcacgttctcatcccacag
tcagacctgcggtggtccaagcagacagacgtggggatcacccacttcaggtctggaatg
agtcatgaagaagatcagctcattcctaacttgtaccgctacattcagccatgggagagc
gagttcatcgactcccagagagtctgggccgagtacgccctcaagagacaggaggccatt
gcccagaacaggcgtctcactctggaggatttggaggactcgtgggacagaggaatacct
cggatcaacacacttttccagaaggacagacacactctggcctatgacaaaggctggaga
gtcagaacagacttcaaacagtatcaggtgctgaagcagaatcctttctggtggacccac
cagaggcacgacggtaagctgtggaacctgaacaactaccgcacagacatgatccaggct
ctaggtggcgtggagggcatcctggagcacacactcttcaaaggcacttacttccccacc
tgggagggtctcttctgggaaaaggccagcggctttgaagagtcgatgaaatggaagaag
ctgacgaacgcccagaggtctggtctgaaccaaatcccgaatcgtcgcttcactctgtgg
tggtcccccaccatcaacagagccaacgtgtacgtgggtttccaagtacagcttgacttg
acaggaatctttatgcacggcaagatcccaacgctgaagatctccctcattcagatcttc
agggctcacttgtggcagaagattcacgagagcatcgtcatggatctctgtcaggttttt
gatcaggagctcgatgctctggagatcgaaaccgtgcagaaggagaccatccatcccagg
aaatcctacaagatgaattcgtcctgtgcagacatcctcctgtttgcgtcttacaagtgg
aacgtgtctcgcccatctctactcgctgactcaaaggatgtgatggacagcaccaccaca
cagaagtactggatcgacattcagctcagatggggcgactacgactctcatgacattgag
cgctacgccagagccaagttcctggactacaccacagacaacatgagcatctacccctcc
cccactggagtgctcattgccattgacttggcttacaacctgcacagtgcctatggtaac
tggttccctgggagcaagcctctgatccagcaggccatggctaagatcatgaaggccaac
ccagctctgtatgtgctccgagagcgcatccgcaagggtctgcagctgtactcctcagag
cccactgagccgtacctgtcctctcagaactacggagaactcttctccaaccagatcatc
tggtttgtggacgacacaaacgtgtacagagtcaccatccacaagacttttgaaggaaac
ttgaccacaaagcccatcaatggagccattttcatcttcaaccccaggacaggccaattg
ttcctcaagatcatccacacatctgtgtgggctggacagaaacgtctgggacagctggcc
aaatggaaaacagctgaagaagttgctgccctgatccgctccctccctgtggaggagcag
ccgaaacagatcattgtgaccaggaagggcatgttggaccctctggaggtgcacttgctc
gacttccccaacatcgtgatcaagggctcggagttacagctgcccttccaggcttgtctg
aaggtggaaaagtttggagacctgatcctgaaggccacggagccacagatggtgctgttc
aacctctacgatgattggctgaagaccatctcgtcttacactgccttctcccgtctcatc
ctgatcctaagagcgctccatgtcaacaacgaccgcgccaaggtgatcctgaaacctgat
aaaaccacaatcactgaaccccatcacatctggcccacgctcacggatgaggagtggatc
aaagtggaagttcaacttaaggatctcattctggccgattatggcaaaaagaacaacgtg
aacgtcgcctccctgactcagtctgagatccgtgacatcatcctgggtatggagatctca
gccccatctcagcagcgtcagcagattgccgagatcgaaaaacagaccaaagagcagtca
cagctcaccgccacacagacccgcaccgtcaacaaacacggagatgagatcatcacctcc
accacctctaactacgagactcagaccttctcttccaagactgagtggagagtcagggcc
atatctgctgccaacctccatctccgaaccaaccacatctatgtgtcctctgacgacatc
aaggagacgggttacacctacattctgcccaagaacgttctcaagaagttcatttgcatt
tcagatctgcgggctcagattgcaggctacctgtatggcaccagcccaccagacaacccc
caggtgaaggagatccgctgtatcgtcatggtacctcagtgggggacacaccagactgtc
cacctccccaaccagctgccgtctcatgaataccttaaagaaatggagcctcttggctgg
atccacacacagccgaacgagtcccctcagctgtccccacaagacgttacaacccacgct
aagatcatggctgataatccgtcatgggatggagaaaagaccatcataatcacctgcagc
tttacgcctggttcgtgcacactcacagcctacaagctgacccccagcggctacgaatgg
ggtcgccaaaacaccgataaaggcaacaacccgaaaggctaccttccatcccactatgaa
agagtccaaatgctgctctctgatcgcttcctgggcttcttcatggttcccggccaagtc
tcctggaactacaacttcatgggtgtgcgccacgatcccaacatgaagtacgacctgcag
ttgtccaaccccaaagagttctaccatgaagtccaccggccttcacacttcttaaacttc
gcctcgctgcaggagggcgagatttacaacgctgacagagaggacatgttcggctga
DBGET
integrated database retrieval system
