Poecilia mexicana (shortfin molly): 106924470
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Entry
106924470 CDS
T08022
Symbol
clasp1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmei03036
]
106924470 (clasp1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmei04812
]
106924470 (clasp1)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
106924470 (clasp1)
Cytoskeleton proteins [BR:
pmei04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
106924470 (clasp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_2
Adaptin_N
Cnd1
Sec7-like_HUS
MOR2-PAG1_C
ParcG
HEAT_DAAF5
MMS19_N
MMS19_C
Motif
Other DBs
NCBI-GeneID:
106924470
NCBI-ProteinID:
XP_014853667
LinkDB
All DBs
Position
Unknown
AA seq
1596 aa
AA seq
DB search
MEEDEEEKMSSMEDLLDLVLQKDLGRRLQVGPEITELVLHPDRCPGLDQDQNLLDRMVDA
LASSWVNSSNYKVVLLGMEVLSALVDRLQERFRTQVGTVLPSLMDRLGDSKDQVREQDQA
LLLKVMDQSANPQYVWERMMGGFKHKNTRTREGLCLCLISTLNVFGSQSLTLNKIVPHIC
NLLGDPTSQVRDAAMSCLVEIYRHVGERVRIDLGKKGLPQSRLNMIFSKFDEVQRSGNMV
LSPLSDKTFEDDESVDGGRSTSKAASVSGRKAVSMGSFRRPSSASSSKSAGRDGSSAGAV
DEEDFIQAFEDVPTVQIYSNREVEEAMTKIRDVLSDDKKDWELRVAALKKLRSLLLAGAP
EFDCFLQQLRLLEASFKLSAKDLRSQVVREACITLGHLSAVLGSRFDHAAEAILPPLLNL
VPNSAKVMATSGVAAIRLILRHTHCPRLVPIISSSCSCKSVAVRRRCFEFVDLMLQEWQT
SSLDRHGALLMETIKKGIHDADAEARSVARKCYWSYQGHFSREAELLFQGLESAYQRALQ
AHLRSGDALVSLPASDRSSSSSQESLNRPLAMKSSAGSSSRGQNQAGAPRRPGAASSPGA
LQRSRSDVDVNASASARSRMPPVSTAAPPSPFSAAAALPPGSYASLGRVRTRRTSAGAGP
TATDGRSRGKVVSQSQPGSRSGSPGRLLSSTYGRIPRPAAGSNGAPCSVSDKTRPRGHRS
QGCSRETSPSRTAAARSRIPRPSMSQGCSRETSRESSRDTSPARGFSPLASRPHSRSTSA
LSSAEGCSDRLAHQARISASVNAMRVLNTGTEVEAAVADALLLGDSRSSKRRPVRRRFES
PGIYSDDDANSDASSACSERSYSSRNGGAGPHFLRQTEDVAEVLNHCASSNWSERKEGLL
GLQNLLKGQRMLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIVLHRDDLQDWLF
VLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPLELQFNILMRFIVDQTQTPNLKVKVA
ILRYIEALARQMDPADFVNSSETRLAVSRIITWTTEPKSADVRKTLHTWAGEDRSSTASL
PREGHLEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTKLLHSHLRSASAGIT
MAAPGDSAGRTPPRPPGSRNSPLTSPTNHGGLSPSRLWGWSADGLSKYPPLPPFPSPLPP
SASLKALRRAYSPSMLEYDSENLNTEDLYCSLRGVSEAIQNFSFRSQEELVEPLRRDGKR
DGTAGVVTASSDPERRFYGDVTEGGRTALDNKTSLLNTPSPRSFSGPRFREYNPYNYTDG
PPEKPGTEDGTEPQRDGRRQECGENKTQNTKSFPAGSAEQLELVGELLKELSQAGDQEDR
RGTLLELLKVAREDSLLVWDEHFKTMLLLLLETLGDKDHSVRALALRVLKEILRNQPARF
KNYAELTIMKTLEAHKDSHKEVVRAAEEAASALAGSIHPEQCIKVLCPIVQTTDYPVNLA
AIKMQTRAVERICREPLLQLLPDVIPGLLQGYDNTESSVRKASVFCLVAVYAVIGEELKP
YLSQLTGSKMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgaggaggagaagatgagcagcatggaggacctgctggacctggttctg
cagaaagacctgggccggcggctgcaggtggggccggagatcaccgagctggtactccac
ccggaccgctgtcccgggctggaccaggaccagaacctgctggacaggatggtggatgcc
ctggccagctcctgggtcaactccagcaactacaaggtggttctgctgggcatggaggtt
ctgtcggctctggtggaccggctgcaggagaggttcaggactcaggtgggaacagtcctg
cccagcctgatggaccggctgggcgactctaaggaccaggtgcgggagcaggaccaggcg
ctgctgctgaaggtcatggaccagtcggccaaccctcagtacgtctgggagcgcatgatg
ggaggattcaagcacaagaacacccggaccagagaggggctctgcctctgcctcatctcc
accctcaacgtgtttggctctcagagtttgacgctgaataaaatcgttcctcacatctgc
aacctgctgggagacccgaccagtcaggtccgtgatgcagccatgtcctgcctggtggag
atctaccgccatgtaggagagcgagtgagaattgacctggggaagaaagggctgcctcag
tcacggctcaacatgatcttcagtaagttcgatgaggtccagaggtcggggaacatggtg
ctgtctcctctgtcagataaaacctttgaggacgatgaatcggtggacggcggacgttcc
acgtccaaagcagcctctgtgtctgggaggaaggcggtgagcatgggctcgttccgacgg
ccgtcctcggcttccagcagcaagtctgcagggcgggacggatcgagtgcaggagctgtg
gatgaggaggatttcatccaggcctttgaggacgttcccacagttcagatctactccaac
cgggaggtggaggaggccatgaccaagatccgggacgtgctgtcggacgataagaaggac
tgggagctgagagtggccgctctgaagaagcttcgctcactgctgctggccggagcgccg
gagttcgactgcttcctgcagcagctgcggctcctggaggcttccttcaagctgtccgcc
aaagacctgcggtctcaggtggtcagggaggcctgcatcacgctgggccacctgtcggcg
gtgctgggcagccgcttcgaccacgccgccgaggccatcctgccacccctcctcaacctg
gtgcccaacagtgccaaagtcatggccacgtcgggcgtggctgccatccgcctcatcctc
agacacactcactgtcctcgcctcgtccccatcatcagcagcagctgctcctgcaagtct
gtggctgtcagaagacgctgctttgagtttgtggacctgatgctgcaggagtggcagacc
agcagcctggacagacatggagcgttgctaatggagacgataaagaaggggatccatgat
gctgatgctgaagctcgatctgtggccaggaagtgctactggagctaccagggtcacttc
agccgggaggcggagcttctgttccagggcctggagtcggcctatcagagagctctgcaa
gcccacctgcggagcggagacgccctggtgtcgctgccggcctccgaccgctcctcgtcc
tcatctcaggagagcctaaaccggccgctggcgatgaagagctcagcaggaagcagcagc
agaggtcagaaccaagccggcgccccccgcaggcctggagccgcctcgtctccaggcgct
ctgcagcgttcccgcagcgacgtcgacgtcaacgccagcgccagcgcccgcagcaggatg
ccccccgtcagcactgctgcgccgccgtctcccttcagcgccgccgccgctcttcctcca
ggatcctacgcttcgctcgggcgagtccggaccaggaggaccagcgccggagccggtccc
acggcgacggacggccggagccgagggaaggtcgtctctcagtcccagcctggcagccgc
tccggttctccaggtcgcctgctcagctccacgtacggccggatcccgaggcccgccgca
ggcagcaacggcgccccctgcagcgtgagcgacaagacgcgaccccgaggtcaccgcagc
cagggctgcagccgagagaccagtccgtccagaaccgcagccgcccggagtcggatccct
cgacccagcatgagtcagggctgcagccgggaaaccagtcgcgagagcagccgcgacacc
agccccgccaggggcttttccccgctggccagccggcctcattcccgttccaccagcgcc
ctgtcctctgcagagggctgctcagaccggctggcccatcaggcccggatctcggcctcc
gtcaacgccatgcgggtcctgaacacgggcaccgaggtggaggcggccgtggccgacgct
ctgctcttgggagactccaggagtagtaagcggcggcccgtccggcggcgcttcgagtcg
cctggtatctactcagacgatgacgccaacagcgacgcctccagcgcctgctccgagcgc
tcctacagctccaggaacggcggcgccgggccccacttcctgcggcagacggaggacgtg
gcggaggtcctgaaccactgcgccagctccaactggtcagagaggaaggagggcctgctg
ggcctgcagaacctgctgaagggccagaggatgctcagccgtgtggagctgaagcgactc
tgtgagatcttcacaagaatgtttgcagacccgcacagcaagagagtgttcagcatgttc
ctggagacgctggtggacttcatcgtcctgcaccgggacgacctgcaggactggctcttc
gtcctgctcactcagctgctgaagaagatgggcgccgacctgctgggctcggtccaggcc
aaggtccagaaggctctggacgtcaccagggagtcgttccctctggagctgcagttcaac
atcctgatgaggttcatcgtggatcagacccagacgcccaacctgaaggtgaaggtggcc
atcctgcgctacatcgaggctctggcccggcagatggacccggccgacttcgtcaactcc
agcgagacgcgcctcgccgtctcacgcatcatcacctggaccaccgagcccaagagcgcc
gacgtccgcaagacgctccacacctgggcaggtgaggatcgaagctccaccgcctctctg
ccccgggaggggcatctggaggagaggtgcaagcaggcggcccaggtggttctgatcgcc
ctgtttgagctcaacaccccagagttcaccatgctgctgggagcgctgcccaaaaccttc
caggacggaaccaccaagctgctgcacagccacctgaggagcgccagcgccggcatcacc
atggcggctccaggcgactcggccggccggacgcccccccgccctcccggcagccgcaac
agcccgctgacctcgcccaccaaccacggcggcctctctcccagtcggctgtggggctgg
agcgccgacggcctctccaaatacccccctcttcctcccttcccctcccctctccctccc
tctgcctccctcaaggccttacggcgagcgtactctcccagcatgctggagtacgacagt
gagaacctgaacactgaggatctgtactgctccctgcgcggcgtctctgaggccatccag
aacttcagcttccgcagccaggaggagctggtggagccgctgcggcgggacgggaagcgg
gatggaacggccggtgtggtgacggcgtcgtcagacccagagcgccggttctatggcgac
gtgacggagggcggccggacggctctggacaacaagacgtcgctgctgaacacgccttcg
cctcgctcgttttctgggccgcgcttcagggagtacaacccctacaactacacagacggc
ccgccggagaagcccggcacggaggacggcaccgagccgcagagagacggccgtcggcag
gagtgtggagaaaacaagacgcagaacactaaaagctttccagccgggtcggcggagcag
ctggagctggtgggggagctgctgaaggagctgtcccaggccggggaccaggaggacagg
cgggggacgctgctggagctgctgaaggtggcccgagaggacagcctgctggtgtgggac
gaacacttcaagaccatgctgctgctgctgctggagacgctgggggacaaagaccactcg
gtccgggcgctggctctccgggttctgaaggagatcctgcggaaccagccggcccggttc
aagaactacgcagagctgaccatcatgaagacgctggaggctcacaaggattctcacaaa
gaggtggtgcgtgcggccgaggaggcggcctccgccctggccggctccatccacccagag
cagtgcatcaaggtgctgtgccccatcgtccagaccaccgactaccccgtcaacctggcg
gccatcaagatgcagactcgcgcggtggagcgcatctgcagggagccgctgctgcagctg
ctgccggacgtcatccccggcctgctgcagggctacgacaacacggagagcagcgtccgc
aaggccagcgtcttctgcctggtggccgtctacgccgtcatcggagaggagctcaagccc
tacctgtcccagctgaccggcagcaaaatgaagctactgaacctctacatcaagagagct
cagacctccaccagcaacagcagcagctcctccgacatctcctcctactga
DBGET
integrated database retrieval system
