Poecilia mexicana (shortfin molly): 106924562
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Entry
106924562 CDS
T08022
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmei00535
]
106924562
00536 Glycosaminoglycan binding proteins [BR:
pmei00536
]
106924562
04091 Lectins [BR:
pmei04091
]
106924562
Proteoglycans [BR:
pmei00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
106924562
Glycosaminoglycan binding proteins [BR:
pmei00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
106924562
Lectins [BR:
pmei04091
]
C-Type lectins
Lecticans
106924562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
hEGF
EGF_3
I-set
Ig_3
Motif
Other DBs
NCBI-GeneID:
106924562
NCBI-ProteinID:
XP_014853807
Ensembl:
ENSPMEG00000021123
LinkDB
All DBs
Position
Unknown
AA seq
1481 aa
AA seq
DB search
MLKWTVLLSLCLSISSATFDYLYEQRSFMDPEDSLTVSIPLQGLQRPLLGETLLLPCYFQ
DHSVEDPGSPPVVPLSHRIKWSYITKEKATTILVALEGQVRISESYLDRVQLQSYPQTPT
DASIKISELCSSDTGVYRCEVQNGIEDAYDIVHVLVQGIVFHYRPFMGRYTLTFEKAKAA
CAQNSAVIASPEQLQAAFEDGFHQCDAGWLSDQTVRYPIHESRMNCYGDKEELPGVRTYG
VRDLNETYDVYCFADRMPGRVFHSTSAGKFTFSEAVLTCSYQGAQLATTGQLYLAWQGGM
DVCNAGWLRDGSVRYPINVRRPQCGGGLLGVRTVYLHTNQTGYPLPDSRYDAFCYTDSPD
DEGSGTDEGSGAVIVTTVTESPEVFFSKTTTESEAVGEVETQQPFDLSFTNSENPSKLPL
PQPTNFTDFTFDLTEAVTSQSAVQREPSKTSVISPAGVVFHYRSPTGRYALTFVEAQLAC
RGVRGSMATPQQLQQAYEDGYHQCDAGWLLDQTVRYSIVFPQEKCAGDLGDQPGVRTYGL
RPAEERYDVYCYTEGINGEVFHVGSAEGFTYDEAASACENHSAVLASTGELYAAWKLGLD
KCRAGWLLDRSVRYPVNSPRPGCGGEKSGVHTLYSSPNQTHYPEPDARFDAYCIRVGFLS
ESNETELNITDIQKALPNQTSDTDLLRPDGFFIVPPIPVEISSSGSGSGDFDSGPAGDNS
GVQVNSGDQVTSGDQSGSGDQSGSGDQSESGEQVTSGYQSGSGDQVTSGYQSGSGDQVTS
GYQSGSGDQVTSGYKSGSGDQVTSGDISGSGGKITFGDQDGYTETVLSSEGSGLASASGS
GSGLGVVFSGPCIAVEGSTSGEPQEAGKGSTDILIIPLSGADSGELSGSGDMSGSGSGFD
SIEKDAGHLTGTGLILDQELSGFSGFLSGSSSGSGRSGDISGSGDAPILIANDELIDAKK
KYNLDGGSLDFSGSGSLSGSGILSGSISGSDSESLTGVTFMGSGFTKLIGSPSGEREEAT
GGLFYSSGPESGGQISGFRISSCSFDTRAGVSGSAVSKSETSTTKGEEEGSAKFFTQGLM
TEIPGDYKVPLEPGENSVEYSGEAIGNNGFYSGDGNKDLSEDHTFMLGVSSSGDSSDPLV
VVLPAPSVGPALTEPTIRTEEDIHGTELTHNSRVYVSPGPAVVPAGLAAPSAEVKPAFVQ
TPVVLGASNPCEPNPCGNASCTVEEGVAFCFEAEVCHPNPCSNGATCVESADSFKCLCLP
SYGGERCEIEEQRCEDGWTKFQGNCYLHVSDRAEWLEAEQRCRHLNAHLVSIITPEEQQF
VSANAQDYQWIGLNDKTVQNDFQWTDGSPLQYENWKLNQPDNYLNSAEDCVVLIWHENGK
WNDVPCNYHLPFTCKKGPVFCEAPPVVKNTRMFGNRRSEYPVNSIIRYQCNPGFRQRHLP
VVRCQADGTWEKPKVECTDVKARNRIKRRSSRNSPVSRKNK
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagtggaccgtgctcctgtctttatgtttaagtatctcctctgcaacatttgac
tatctttatgagcagagatccttcatggatccagaggatagtctgactgtgagcattcct
ctgcagggcttacagcgccctctgctgggagaaactctgctactgccatgctactttcag
gaccactctgttgaagatcctggttctccccccgtcgtccccctttcccaccgtatcaaa
tggagctacatcacaaaggaaaaggcgactaccatccttgtggctttggagggacaggtc
cgcatcagtgaaagttatctggacagagttcagctgcagagctacccccagactccaaca
gacgccagcatcaaaatatcggagctatgttccagtgacacaggagtgtatcgctgtgaa
gttcagaatggcattgaggatgcttatgacattgtgcacgtccttgttcaaggtatcgtg
ttccactaccggccctttatgggtcgctacactttgacctttgagaaagcgaaggcagct
tgtgcccagaacagtgcagtcattgcttctccagagcagcttcaagcagcattcgaagat
ggtttccaccagtgcgacgctggctggttgtctgatcaaacagtgcggtacccaatccat
gagtctcgcatgaactgctatggcgacaaagaggaactccctggggtcaggacgtatggc
gtgagagatctcaatgagacatatgatgtttactgctttgcagataggatgccaggcagg
gttttccacagcacctctgcagggaagttcaccttctctgaggctgtgctgacgtgctcc
taccagggagctcagctagccaccacaggtcagctgtaccttgcatggcagggcggtatg
gacgtctgcaacgccggctggctgagagatgggagtgtccgctaccccatcaatgttcga
cggccacaatgtggagggggtctgctgggggtgcgaacagtttatctccacacaaaccaa
acaggatacccacttcctgactcccgctacgatgccttctgttacacagattcccctgac
gatgagggctcaggcacagatgaggggagtggtgctgtgattgttaccacggtgacggag
agtccagaggtgttctttagcaagacgaccacagagagcgaagcagttggagaggtggag
acccagcagccatttgatctgagcttcaccaacagtgagaaccccagcaagctgccactt
cctcagccaacaaacttcacagatttcacctttgaccttactgaagccgtcaccagccag
tcggctgtacaaagggagcccagcaaaacctctgtcatctctccagcaggcgtggtcttc
cattaccgctcacccactggccgttatgctctcacattcgttgaggctcagttggcctgc
cggggtgtaagaggctccatggccacaccgcagcagctgcagcaagcatacgaggatgga
tatcaccaatgtgatgcaggttggcttctggaccagactgtgaggtattctatcgtgttt
cctcaagaaaaatgtgctggagatcttggagatcaacctggagttcggacatatggcctc
agaccagcagaggagagatacgatgtttactgctacaccgaggggatcaatggagaggtt
tttcatgtgggatctgctgagggtttcacctacgacgaggctgcttctgcctgtgaaaac
cacagtgcggttctagcctccactggagagctctatgcagcctggaaactgggcttggac
aagtgccgagcaggctggctactggaccgcagcgttcgctaccccgtcaacagcccccgt
cctgggtgtggaggagaaaaatcaggggtccacactttgtactcttctccaaaccaaaca
cactaccctgaacctgatgccagatttgatgcatactgtataagagttggctttctgtct
gaatcaaatgaaactgaactgaacatcaccgacatccagaaggccctacctaaccagaca
tcggatactgacttattaaggcctgatggtttcttcatcgttcctcccattcctgtggag
atttcaagttctggatctggttcaggagactttgattcaggccctgcaggagataactct
ggagtacaagttaactctggagaccaggtgacctctggagatcagtctggatctggagat
cagtctggatctggagatcagtctgaatctggagagcaggttacctctggatatcagtct
ggatctggagaccaggttacctctggatatcagtctggatctggagaccaggttacctct
ggatatcagtctggatctggagaccaggttacttctggatataagtctggttctggagac
caggttacttctggagatatatctggttctggaggcaaaatcacctttggagaccaagac
gggtacacagagactgtgctttccagtgaaggatctggtttggccagtgcatctggttct
gggtcaggtctcggagttgttttctctggaccctgcattgcagtagagggctcaacgtca
ggagaacctcaagaggctggaaaaggaagcacagacattcttataatccctttgtctgga
gctgattctggggaactcagtggaagtggagatatgtccgggtctggatctggatttgac
tccattgaaaaggatgctggacatctcactggcacaggtcttatcttggaccaggagttg
tcaggttttagtggttttctatctggatcttcatctggaagtggacgatctggagacatt
tctggaagtggagatgctccgatcttgatagcaaatgacgaactgattgatgcaaagaag
aagtacaaccttgatggaggttcattagatttcagtggttctggaagcttatctggatct
gggattctcagtgggtcaatctctggaagtgactctgagtctcttactggtgtgactttt
atgggttcaggcttcactaagcttattgggtcaccttctggagaacgcgaggaggctact
gggggtttattctacagctctggaccagaaagtggggggcagatatctggatttagaatc
tcaagttgcagttttgatactagagctggagtatctggatccgctgtctctaaatccgaa
acatcaacaaccaaaggtgaggaagagggcagtgctaaatttttcactcagggtctaatg
acagaaatacctggagattataaggtccctctggagccgggagaaaactcagtggagtac
agtggagaagcaattggcaacaatggtttctactccggtgacggaaacaaggacttatct
gaggatcacaccttcatgttgggggtttcttcttctggagattcttctgatccactggtg
gttgtcctacccgctccatcagttggcccagcactaacagaacccaccataagaacagag
gaagatattcatggaactgaactgacacacaactccagagtttatgtttctccaggacca
gcagttgtccctgcaggattagcagctccttctgcagaagtcaaaccagcttttgtgcaa
acaccagttgtcctaggagcttccaacccatgtgaaccaaatccttgtggcaatgcttcg
tgcacagtagaggaaggagttgctttctgctttgaggcagaagtgtgccaccccaaccct
tgttccaatggagccacctgtgtggagagtgcagactctttcaaatgcttatgcctgccc
agctacggaggggaacgctgtgagatcgaggagcagcgatgtgaagacggctggacgaag
tttcagggaaactgctacctgcacgtctctgacagggcggagtggctggaggcggagcaa
cgctgccggcacctgaacgctcacctggtcagcatcatcactccagaggagcagcagttt
gtcagcgctaatgcgcaggactaccagtggattggcctgaacgacaaaacggtgcagaac
gatttccagtggacggacggctctcctctgcaatatgagaactggaagctgaaccagcca
gataattacctgaactcagcagaggactgcgtggttttgatctggcatgagaacggaaag
tggaacgacgttccctgcaactaccacctgccgttcacctgcaagaagggaccagtgttt
tgcgaagctccgcctgtggtgaaaaacacacgcatgtttggaaaccggaggtcggagtat
cccgtcaactccatcatccgttatcagtgcaacccaggatttagacagcgccatctacct
gtggtccggtgccaagctgacgggacctgggagaaacccaaagtggagtgcacagatgta
aaagccaggaacagaataaaacgcaggagcagcagaaattcaccagtgagcagaaaaaac
aaataa
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