Poecilia mexicana (shortfin molly): 106925261
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Entry
106925261 CDS
T08022
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmei03009
]
106925261 (ddx55)
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106925261 (ddx55)
Ribosome biogenesis [BR:
pmei03009
]
Eukaryotic type
Pre-60S particles
Helicases
106925261 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
SLFN-g3_helicase
Helicase_C_2
SBF_like
AAA_19
PRANC
YbjM
Motif
Other DBs
NCBI-GeneID:
106925261
NCBI-ProteinID:
XP_014854955
Ensembl:
ENSPMEG00000020635
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MESGTKTCESASVSPRRVNNYGTQRKKVHRAERPCANSVSVLLLRLLRLLSNMENITDGT
WDSLPVQLNEKILQTLEEMKFTYMTPVQSACIPLFMNNKDVAAEAVTGSGKTLAFVIPII
ELLLKREEKLKKKQVGALVITPTRELALQISEVMGMFIQKFPEFTQILLIGGSNPAEDVE
KFKEHGGNIVIATPGRLEDMFRRKSEGLELASAVRSLDVLVLDEADRLLDMGFEASLNSI
LSYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGQAASATQKTPARLSNYYTI
CRAEDKFNNLVAFLRQHKHEKQLVFFSTCACVEFFGRALESLVKKVTIHCIHGKMKNKRS
SIFSDFRALKSGILVCTDVMARGIDIPDVNWVLQYDPPSSARAFVHRCGRTARIGNHGNA
LVFLLPMEEPYVNFLSINQKCPLQKMSPIKDVVDVLPKVKAMALADRAMFDKGMRAFVSY
VQAYAKHECSLIFRVKDLNFVSLANGFALLRLPKMPELKGKTFPDFVETTVDTDSIRYKD
KNRQKQRQKMLAELKDKEKTELPKKNFVKNKAWSKQKTKKERRKKRAAKRKHDEDSDMDE
EYMKELLEDTRLLKKLKKGQISEEDFEQQLTNSKQEAGGP
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcggaaccaaaacatgcgagtcggcttcagtttccccccggcgtgtaaacaac
tacggaacgcagcggaagaaggtccatcgtgcagaaaggccatgtgctaacagcgttagc
gttctgctgctacgtcttcttcgtttactttccaacatggaaaacattacagacgggaca
tgggacagcttacctgttcaactaaacgagaagattttacaaacacttgaggaaatgaaa
tttacttacatgacacctgtacagtctgcttgtattccactgttcatgaacaataaagac
gtggctgctgaggcggtcaccggcagtgggaagactttggcttttgtcattcctattata
gagctgctgctgaagcgcgaggagaaactcaagaagaagcaggtcggtgctctggtgatc
actcccacacgagaactggccctgcagatcagtgaggtgatgggaatgtttattcaaaag
tttccagagttcacgcagattttgctgattggtggcagcaacccagcagaagacgtggag
aagtttaaagagcatggtggcaacattgtgattgcgacgcccggccgcctagaggacatg
ttcaggaggaaatcagaggggctggaactggccagcgcggtccggagcctggatgttctg
gttctggatgaggccgacaggctgcttgacatgggctttgaggccagcctgaacagcatc
ctgagctacctgcccaaacagagacggacgggcctgttctcagccacccagactcaggag
ctggaaaagctggtgagggccggcctcaggaaccccgtccgcatcaccgtcaaagagaag
ggtcaggctgcctcggccacccagaagaccccggcccgtctctccaactactacactatt
tgcagagcagaggacaagttcaacaacctggtggcgtttctaaggcaacacaagcatgag
aagcagctggtcttcttcagcacctgtgcctgtgtggagttcttcggccgagccctggag
tcgctggtcaagaaggtcacgattcactgcatccacggcaagatgaaaaataagcgcagc
agtattttttcagacttcagggccttaaagagcgggatcttggtctgcaccgacgtcatg
gccagaggcatcgacatccccgacgtgaactgggttctacagtacgatccccccagcagc
gccagagcttttgtgcatcgatgcgggagaacagcacgtattggtaaccacggcaacgcc
ctcgtcttcctgctgccaatggaggaaccgtatgtcaacttcttgtccatcaaccagaaa
tgcccgctgcagaagatgtctcctataaaggacgtggtggacgtgctgcccaaggtgaag
gccatggcgctggccgaccgcgccatgttcgacaaaggcatgagggcctttgtgtcgtac
gtccaggcttacgccaaacacgaatgcagcctcatcttcagagtaaaagatctgaatttc
gtgtccctggccaacggcttcgcgctgctccgcctgccgaagatgcccgagctgaagggg
aaaacgtttcccgacttcgtggagacgacggtggacacagacagcatccgctacaaggac
aaaaacagacagaagcagaggcagaagatgctggctgagctgaaagacaaggagaagacg
gagctccccaagaagaacttcgtcaagaacaaggcctggtccaaacagaagaccaagaag
gagcgccggaaaaaacgcgccgccaaaaggaaacacgatgaggactccgacatggacgaa
gaatacatgaaggagcttttagaagacactcgcctccttaagaaactaaaaaaaggccaa
atcagcgaggaagacttcgagcagcagctcacaaactcaaagcaggaagcaggtggaccg
taa
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