Poecilia mexicana (shortfin molly): 106925281
Help
Entry
106925281 CDS
T08022
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106925281 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106925281 (smarca5)
03036 Chromosome and associated proteins [BR:
pmei03036
]
106925281 (smarca5)
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
106925281 (smarca5)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
106925281 (smarca5)
RSF complex
106925281 (smarca5)
WICH complex
106925281 (smarca5)
B-WICH complex
106925281 (smarca5)
NORC complex
106925281 (smarca5)
BRF complex
106925281 (smarca5)
NuRF complex (fruit fly)
106925281 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
ERCC3_RAD25_C
AAA_14
Motif
Other DBs
NCBI-GeneID:
106925281
NCBI-ProteinID:
XP_014855020
Ensembl:
ENSPMEG00000019849
UniProt:
A0A3B3YXX2
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MSESENCVEQREEPTELEEAGGAEEKSDSSDAGKESSSEGGADAQDASSSSSSKTKDSTP
GYEEKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSA
GDNRHRRTEQEEDEELLNESTKTTNVCTRFDESPSYVKTGKMRDYQVRGLNWLISLYENG
INGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAV
CLIGDRDQRTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKS
KLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQ
KLVERLHTVLRPFLLRRIKADVEKTLLPKKEIKIYVGLSKMQREWYTKILMKDIDILNSA
GKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNGGKMVVLDKLLPKMKEQ
GSRVLIFSQMTRMLDILEDYCMWKNYEYCRLDGQTPHEERQVSINAYNEPNSTKFIFMLS
TRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVYRFITENTVEERIV
ERAEMKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKESEITDDDIDAIL
ERGERKTMEMKEKLSSLGESSLRNFTMDTENTSVYTFEGEDYREKKKVITNWIEPPKRER
KANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGY
KVPRNPDIPNSAQVQKEEQAKIDEAEALTEEELEEKENLLQQGFTIWSKRDFNQFIKANE
KWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIK
KALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIR
NSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKSGSAQKRKA
EGTPDGRGRRKKLKL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagcgaaaactgcgttgaacagcgggaagaaccaactgaacttgaagaagcc
ggaggagcggaggaaaaatcagactcttcagatgctggaaaagaatcctcatcagaaggt
ggtgctgatgcacaagatgcttcctcctcttcatcatctaagactaaagattccactcca
ggttatgaggagaaagtgcaaactgaccgaaccaacaggtttgaatatctgttaaagcaa
acggagctgtttgcacatttcatccaaccggctgcacagaagacccccacctccccgctg
aagatgaagccaggccgtcctcggatcaagaaagacgagaaacagaacctgctctctgct
ggagacaaccggcaccgccgcaccgagcaagaggaggatgaagagcttctcaacgagagc
acaaagaccaccaacgtgtgcactcgctttgatgagtctccctcctatgtgaaaacagga
aaaatgagggactaccaggtccgtggtctgaactggctcatttctctgtatgaaaatgga
atcaatggcatcctggcagatgagatgggactggggaagaccctccagaccatcgccctg
ctgggttacatgaaacactacagaaacatcccaggtcctcacatggtcctggtccccaag
tccactctgtacaactggatgaacgagttcaaacgatgggtcccctctctgcgcgccgtc
tgcctgatcggagatcgggatcagcgtaccgccctgatcagagacgtcctgctgccagga
gagtgggacgtctgcgtcacgtcttacgaaatgctcatcattgaaaaggccgtgtttaag
aagttcaactggaggtacctggtcatcgatgaagctcacaggatcaagaacgagaagtca
aagctgtcagaaattgtgcgtgaatttaaaaccaccaaccggctgctcctgactggaacg
ccgcttcagaacaacctgcatgagctctgggctctgctcaacttcctgctgcctgacgtc
ttcaactcatcggaggatttcgactcatggtttgacacaaacaactgcttgggtgaccag
aagctggttgaacgtcttcacactgtgctgcgtcctttcttgcttcgtcgtatcaaagca
gacgtcgagaaaactttgcttcccaaaaaagagatcaagatttacgtgggtctcagtaaa
atgcagcgcgagtggtacacaaagatcctcatgaaggacatcgacatcttaaactctgcg
ggcaaaatggacaaaatgcgtctgctgaacgtcctcatgcagctcaggaaatgctgcaac
catccgtacctttttgacggggcggagcccggcccgccctacaccaccgacctccacctg
gtggtgaacggcggcaaaatggtggtgctggacaagctgctgcccaaaatgaaggagcag
ggctcccgtgtgctcatcttcagtcagatgaccaggatgctggacatcttggaggactac
tgcatgtggaagaactatgagtattgccgtctggacggacaaacaccacacgaagaaaga
caggtctccatcaacgcctacaacgagccaaacagcacaaagttcatcttcatgttgagc
accagggccggcggtctgggcatcaacctggctacagccgacgtagtcattctctacgac
tcggactggaacccccaagtcgacctgcaggcgatggatcgagctcacagaatcggtcag
cagaagcaggtgcgtgtttaccgtttcatcacggaaaacaccgtggaggagaggattgtg
gagagggccgagatgaagctgcgtctggactctatcgtcatccagcagggaagacttgtg
gatccaagtgcgaacaagctgggtaaagacgagatgttgtccatcatccggcacggtgcc
acacacgtgtttgcttccaaagagagcgagatcacagacgatgacattgatgcgatcctg
gagcgcggagaaagaaagaccatggagatgaaagagaagctgtcatctctgggtgaaagc
tcactgaggaacttcaccatggacactgagaacaccagcgtgtacacgttcgaaggagag
gactacagagagaagaaaaaggttatcaccaactggattgagcctcccaaaagagaacgg
aaagccaattacgccgtagatgcgtacttcagggaagctctgcgagtcagtgagcccaaa
gcacccaaggctcctcgtccgccgaagcagccaaacgtccaggacttccagttcttccct
ccacgtctgtttgagcttctggagaaagagatcctgttctacagaaagaccatcggatac
aaggttccacgtaatcccgacatccccaactcggcccaggtccaaaaagaagagcaggcc
aagatcgacgaggccgaagctctgactgaggaggagctggaggagaaagagaatctactg
cagcagggattcacaatttggagtaaacgagacttcaaccagttcattaaagccaacgag
aaatggggaagagacgatatcgagaacatcgccagagaagtcgagggaaaaacacctgaa
gaagttatggaatattctgccgttttctgggagcgctgcaacgagttacaggatatcgaa
aagatcatggcccagatcgagagaggagaagccagaattcagagaagaatcagcatcaag
aaagctctggactcgaagattggacgctacaaggctcccttccatcagctccgcatctcc
tacggcaccaacaagggcaagaactacacggaggaggaagaccgcttcctcatctgcatg
ctgcacaagctgggcttcgacaaggagagcgtctacgacgagctccgccagtgcatccgt
aactcgcctcagttccgctttgactggttcctcaaatccaggacagccatggaactgcag
aggcgatgcaacactctgatcacgctgatagagagagagaacatggagctggaggagaga
gagaaggctgagaaaaagaagaggggaccaaagagcggctcagcgcagaaacgtaaagca
gagggaacccccgacggccgaggacgcaggaagaagctcaagttgtga
DBGET
integrated database retrieval system
