Poecilia mexicana (shortfin molly): 106925340
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Entry
106925340 CDS
T08022
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106925340 (taf1b)
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
106925340 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF5816
Motif
Other DBs
NCBI-GeneID:
106925340
NCBI-ProteinID:
XP_014855115
Ensembl:
ENSPMEG00000018370
UniProt:
A0A3B3XL95
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MDEEDTDGYKEPCNQCAAVDWGISDEGRFYCRSCHNVIERTREVVDMSFTSNSNRISRIG
NKSRIRKSERGYIWMLCEGFQFILQNQADALLRLGVAPQFKDDVLCQMWRLYLQKSQQGY
TRNPIRNLRFRGAALDSDTDMDSAAESVLSDNFTDSGSVLCSSAGSNAESSSDWLGSDYS
STGTSASWKRSRSLMTMKKTLALIHLALVWSREALTLSDLLRLVKEGHVPYVTAYEDLPE
EMKLCGPDALLFHVESIPSHRSVHKEAQVLVQFLQLPAFPPIIPEALLHPAPLSLRYLTD
ANLPDELHRWVCVLMDRAGMADQKRHTLDGGLRPILPRYDLQAAALIIVTIKVIFGLDDH
TEWDLSNKADSHDDKADMFSFRKWYKLVQAALVEAQQRRDQDTARKQWKGKKLFFVDKRD
RLIVTKRRRISENVQMCLKRLSSCPAAVHYVGPSSFQFCWGDENGSDGPSLHHTKLDGVI
SLSNGFMTPLNLNYWHPPLRPCNPRTCVSHYPSMEPTLPRSFVWLLQLFSFMLDVEAWYL
FDEVLEMERRVFGIKTPQIGQQVETRKWLRTEKTNATQTGDPVKKPRTPRKGRNGINI
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaggatacggacggatacaaagagccctgcaatcagtgtgcagccgtggac
tggggcatctcagacgagggtcgcttctactgcaggtcctgccacaatgtcatcgagaga
accagagaggtggtggacatgtcgttcacttccaactccaacagaatttcccggatcggc
aataaatccagaatcaggaagtcggagcgcggttacatctggatgctgtgcgaaggtttc
cagttcatcctgcagaaccaggccgacgctctcctcagactgggagtcgctcctcagttt
aaggacgacgttctgtgtcagatgtggagactttatctgcagaagagccagcagggatac
accagaaacccaatcaggaatttaaggttcagaggggcagcgttggactcggacacagac
atggacagcgccgcggaatcggttctgtctgataatttcaccgactccgggtcagttctg
tgcagctccgctggctctaatgcagagagctccagtgattggctgggatcggactacagc
agcacaggcacctcggcgtcgtggaaacggagccgcagcctgatgaccatgaagaagact
ctggctctgatccacctggctctggtctggagccgcgaagctctgacgcttagcgacctg
ctcaggctggtaaaagaaggtcacgtcccgtatgtgactgcatacgaggatcttccagaa
gagatgaagctgtgtggtccggatgctcttctttttcatgttgagagtatcccgtctcac
cgctcggtccacaaagaagcgcaggttctggtccagttcctgcagctccctgcttttcct
ccgatcatcccagaagcattgctccacccggcgccgctcagcctgcgctacctgactgac
gctaacctgcccgacgagctgcacaggtgggtctgcgtcctgatggaccgtgcaggtatg
gcggatcagaagcgccacacgttggacggcgggttgcgtcccatcctgccgcggtacgac
ctgcaggccgccgcgctcatcattgtcaccataaaggtgatatttggcctggacgatcac
actgagtgggatttatcgaacaaggctgattcccatgacgacaaagcagacatgttcagc
ttcaggaagtggtacaaactggttcaggctgctttggtggaggcccagcagaggagggac
caggacaccgccaggaaacagtggaaaggaaagaaactgttcttcgtggataagcgggac
agacttatagtgacaaaaaggagaagaatctcagagaacgtccagatgtgtttaaagagg
ctgtcttcttgtccggcggccgtccattatgtcggtccctccagcttccagttctgctgg
ggcgacgagaacggatcagacgggcccagtctgcaccacaccaagttggatggagtcatc
tccctgagtaacggattcatgactcccttgaacctcaactactggcatccgccgctgcga
ccctgcaacccccggacgtgcgtcagtcattaccccagcatggagcccacgctgccgcgc
tccttcgtctggctgctccagctcttctccttcatgctggacgtggaggcctggtatctg
ttcgacgaggtgctggagatggagaggcgcgtctttggcatcaaaacgccgcagatcgga
caacaagtcgagaccaggaagtggctcaggactgagaaaacaaacgcaactcaaactgga
gatccagtaaagaaacccagaaccccaagaaaaggaagaaatggaataaacatttga
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