Poecilia mexicana (shortfin molly): 106925344
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Entry
106925344 CDS
T08022
Symbol
cpsf3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106925344 (cpsf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106925344 (cpsf3)
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106925344 (cpsf3)
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106925344 (cpsf3)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106925344 (cpsf3)
U7-dependent histone pre-mRNA processing factors
106925344 (cpsf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
106925344
NCBI-ProteinID:
XP_014855124
Ensembl:
ENSPMEG00000018309
UniProt:
A0A3B3YW44
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MAAKRKADATVPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEDSMEKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPSVKPDILITESTYGTHIHEKREEREARFCNTVHDIVNRE
GRCLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLARKCMAVYQTYINAMNDKI
RKAINVNNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDRRNGVI
IAGYCVEGTLAKHIMTEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLTFRGEKLAKVMGALADK
KCAQGQRVSGILVKRNFNYHIMTPTDLSNYTDLSVGMVTQTQAIPFTGPISLLVSQLRNL
AGDVQQVEKAEKITVKIFESITLVHEAGMVLLEWVANPLNDMYADAVATVVLEVQSNPSA
QKFLDRKETFDMEVFVERLELMMHDMFGDDCVNFKDSRNLFVTVDGATATIDPETRAVTC
LDDEPLREMIEVAVHRLFEALTPVF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaaacgtaaagcggatgcgacggttcctgcggaggagagcgaccagctgctg
atccgcccgctaggagccggtcaggaagttggacgatcctgcataattctggagttcaaa
ggcagaaaaatcatgctggactgcgggatccatcctggtctggaggggatggacgctctg
ccctacatcgacctgatcgacccggctgagatcgacctgctgctcatcagccacttccac
ttggaccactgtggagcgcttccctggttcctgcagaagaccagctttaagggacgtact
ttcatgacacacgccaccaaggccatctaccgctggctgctgtccgactacgtcaaagtc
agtaacatctcggcagacgacatgctgtacaccgagacggacctggaggacagcatggag
aagattgaaactatcaacttccatgaggtgaaagaagtggcaggcatcaagttctggtgt
taccacgccggccacgttctgggcgccgccatgttcatgatcgagatcgccggcgtcaag
ctgctgtacaccggagacttctcccggcaggaggacagacacctgatggcggcggagatc
cccagcgtgaagccagatatcctcatcacagagtcgacgtacgggacccacatccatgag
aagcgggaggagagagaggcccggttctgcaacacggtgcacgacatcgtgaatcgcgag
ggccgctgcctgatccccgtgttcgccttgggacgagcccaggagctgctgctcatcctg
gacgagtactggcagaaccacccggagctccacgacattcccatctactacgcctcgtct
ctggccaggaagtgcatggccgtctaccagacctacatcaacgccatgaacgacaagatc
cgcaaggccatcaatgtcaacaaccccttcgtcttcaagcacatcagcaacctgaagagc
atggatcattttgacgacatcggccccagcgtggtgatggcgtcgcctggtatgatgcag
agcggactctccagagagctgtttgagagctggtgcaccgacaggaggaacggcgtcatc
atcgccgggtactgcgtggagggaacgctggccaagcacatcatgactgaacctgaggag
atcaccaccatgtcgggtcagaagcttcctctgaagatgtctgtggactacatctccttc
tcggctcacaccgactaccagcagaccagcgagttcatcagagctctcaaacctccccac
gtgattctggtccacggcgagcagaacgagatggcccgcctgaaggcggctctgatccgg
gagtacgaggacaatgacgaggtccacatcgaggtccacaacccgaggaacaccgaggcc
gtaacgctcaccttcagaggagagaagctggcgaaggtgatgggcgcgctcgcagacaag
aagtgcgctcagggccagagggtctccgggatcctggtcaagaggaactttaactaccac
atcatgaccccaactgacctctccaactacacggatctgtccgttggcatggtgacccaa
actcaggccatcccgttcaccggacccatctccctgctggtgagccagctgaggaacctg
gcaggtgatgtgcagcaggtggagaaggcggagaaaatcacagtgaagatctttgaaagc
atcacattggttcatgaagctggcatggtgctgctggagtgggtcgccaacccgctcaac
gacatgtacgcagacgccgtcgccactgtggttctggaggtccagtccaatcccagcgcc
cagaagttcctggacaggaaggagaccttcgacatggaggtgtttgtggagcgtctggag
ctcatgatgcatgacatgttcggggacgactgcgtaaatttcaaagacagcaggaatttg
tttgtgacggtggacggtgccacggcaacaatcgacccggagacgagagcggtgacgtgt
ctggacgacgagcctctgagagaaatgattgaagtcgccgtccatcgactctttgaggcc
ctcacgcccgtcttctga
DBGET
integrated database retrieval system
