Poecilia mexicana (shortfin molly): 106925539
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Entry
106925539 CDS
T08022
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106925539 (taf1c)
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
106925539 (taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Rrn6_K-rich
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
106925539
NCBI-ProteinID:
XP_014855440
Ensembl:
ENSPMEG00000012492
UniProt:
A0A3B3X661
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MDYQFPQQLFPSFYSSEPPNRVQRHSAGGWGCYDGVLAQGGTGSLSSWAFRSKRQVGGEV
WRQMEPVPVPLLSPRKAFQELVTPPDPLDFLKHMQNFFMDHGPDAFGCMSEMLGENFHFQ
KAKLKKKCRRDSINMWRTKSFVDQLKFNMCPMAYRSRSLDRYSSLLWDVVHDVPPDLLGS
LLFEELTEQRDRMQFSEAATGGALAFVPFSQSDGCLLYPGGLGMDRLNFHRVVLERDGSA
CMDTGQKPVSFQLRGPVRQISCSSRFGDSCVAVRSDHVCGVWGMGDQNEPRLLQVVGTEA
AASCVSTSPHILGEVLVASESGAASLWTVGRGLQKVRTEESNLYFNAKSSWRWCEFSAHP
RVMLYADRTGVELTDFRLKLESHPGLTLFRISSTSDCQRGERLLLVRFLGDVHPFHHLLT
TQHSAYIVDERFPCVPMLKWDHMMEAPPLFCHVAPGSASGTTKVLLGSQSSQEVTLLQYS
GGAVEACCSHGSPQVLLRPRDSLALLPVQLPHRQQTAAHRLASPAAGLTCLQRTSVSTAT
MIVLQLTAAGDVFYQILERDDGKPGTPEAGTPETGMPEAGALETEVRFPLLVAETSSDED
VVMPTQAPNALTFVPETPDRNQSSDRPPDRIPAFVAVGNGADWSAASALSSATRHAWRRW
LQKLMRQEGKPGAPPRLAVRTDGLLSVPELAAAGRHLQGALQQDLQRCMRTRSLLLNSDL
DPVPVPPAVDAEAWRDLLSNRLTTAWRGGQEAWLEWWQEERGANQAMKREALRRKRRREK
EAQRAAGRHLQLSGSFTSSVSYQTDLDDLSGWSSGTSGPLSDSQRSRPLGQLASFLEDQD
DSLPPDRLDPPCRTPEPQTANQRSRNLTDQSLSFMWETQDDPPLHPTPSSSSQLPSFPSL
TPSRASQSQRGALQGSQPKKKKSRMGF
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggactatcagtttcctcagcaacttttcccctcgttttacagcagcgaaccgccgaac
cgggtccagagacacagcgccggaggatggggctgctacgacggagtcttagcgcagggc
ggcaccggctctctctccagctgggcgttcaggtccaaacggcaggttggaggggaggtc
tggcgccagatggagccggttccggttcccctgctgtcccccaggaaagcgttccaggaa
ctcgtgacgcctcctgatccgctggacttcttaaaacatatgcagaacttcttcatggat
cacggcccggacgccttcgggtgcatgagtgagatgctgggggaaaacttccacttccag
aaagccaagttgaagaagaaatgtcgtcgggattcgatcaacatgtggaggacgaagagc
ttcgtcgaccagctgaagttcaacatgtgtcccatggcgtaccggtcccggtctctggac
cggtactccagcctgctgtgggacgtggtccacgacgttcctccggacctgctgggctcg
ctgctgttcgaggagctgaccgagcagagggaccgcatgcagttctcggaggcggccacc
gggggcgccctggccttcgtcccgttctcacagagcgatggctgcctgctctaccccggg
ggcctggggatggaccgcctcaacttccacagggtggtgctggagcgcgacggctccgcc
tgcatggatactggccagaagccggtcagcttccagctgaggggtccggtccgacagatc
agctgcagctcgcgcttcggcgacagctgcgtcgccgtgcgctccgaccacgtctgtggc
gtctggggcatgggggaccagaacgagccgcgcctgctgcaggtggtcggcaccgaagct
gctgccagctgcgtcagcaccagtccgcacattctgggcgaagttctggtggcgagtgag
agcggagcggcgagcctgtggacggtcggcagagggctgcagaaggtccgaacggaggag
agcaacttgtacttcaacgccaagtcgtcatggcgatggtgcgaattctccgcccaccca
cgagtgatgctgtacgccgaccggacgggggtggagctcacagacttcaggctgaagctg
gagtcgcacccgggtctcactctgttccggatcagcagcacctcagactgccaaagggga
gagcgcctcctgctggtcagattcctgggagacgttcacccctttcaccacctcctcacc
acgcagcactcggcctacatcgtggacgagcgcttcccctgcgtccccatgctgaagtgg
gaccacatgatggaggctccgcccctgttctgccacgtggctccgggctccgcgtcagga
accacgaaggttctgctcgggtcgcagtcgtcccaggaggtcactctgctgcagtactct
ggaggcgcagtggaggcgtgctgcagccacggttctcctcaggttctgctcagacccaga
gacagtctggctctgctcccggtccagttgccccaccggcagcagaccgccgcccacaga
ctggcttctcccgctgcaggcctgacgtgtctccagaggacgtccgtttccacggcgacc
atgattgtcctccagctgacggcggcgggggacgtcttctaccagatcctggagcgggat
gatggaaaacccggaacgccggaggccggaacgccagagactggaatgccggaggccgga
gcactagagactgaagttcgcttcccgttgttggttgcagaaacgtccagtgacgaggac
gtcgtcatgccaacgcaagctcccaacgctctcacgtttgtcccggaaacgcccgacagg
aaccagagttcggatcggcctccggatcggatcccggcgttcgtcgccgttggtaacgga
gcggattggtcggctgcctcggcgctgagcagcgccacgcgtcacgcctggaggcgctgg
ctgcagaagctgatgagacaggaggggaaacccggcgctccgccgcgcctcgcggtccga
accgatggtctgctgagcgtgccggagctggctgccgccggacgccacctgcagggggcg
ctgcagcaggacctgcagcgctgcatgcggacgcggtcgctgctgctgaacagcgacctg
gacccggttccggtgccgccggcggtggacgccgaggcgtggcgcgacctgctgagcaac
cggctgacgacggcgtggcgcggcggccaggaggcgtggctggagtggtggcaggaggag
cggggggcgaaccaggccatgaagagggaggcgctgcggaggaagaggaggagggagaag
gaggcgcagcgcgcggcagggcgccacctgcagctcagcggcagcttcacctcctccgtc
agctatcagacggacctggacgacttgtccggctggtcctcggggaccagcggcccgctg
tccgacagccagcggagcaggcctctgggccagctggcctccttcctggaggatcaggac
gactcgctgccgccggaccgtctggatccgccctgcagaactccagagccacaaacagcc
aatcagaggagcaggaacctgaccgaccaatcactgagcttcatgtgggaaacacaggac
gatcctcctcttcatcccaccccctcctcttcctctcagctgcccagctttccgtctctg
acgccctccagggcgtcgcagagccagcggggggcgctgcaggggtcccaacccaagaag
aagaagtcccggatgggattctga
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