KEGG   Poecilia mexicana (shortfin molly): 106925666
Entry
106925666         CDS       T08022                                 
Name
(RefSeq) collagen alpha-4(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei04510  Focal adhesion
pmei04512  ECM-receptor interaction
pmei04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106925666
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106925666
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106925666
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmei04147]
    106925666
   00536 Glycosaminoglycan binding proteins [BR:pmei00536]
    106925666
Exosome [BR:pmei04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   106925666
Glycosaminoglycan binding proteins [BR:pmei00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   106925666
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 106925666
NCBI-ProteinID: XP_014855588
LinkDB
Position
Unknown
AA seq 1673 aa
MAFKVTFMMFFTSWWFIFLVIHVQLLKSGKIEGPCQGRDCSQCVCHPAKGARGPPGKPGR
QGIQGPMGQRGRTGPQGEKGTVGAAGSHGLQGPKGDRGLTGVPGFTGHEGFPGHPGAGGE
PGLPGLDGCNGTRGHPGPDGLPGLDGLHGPPGPKGAKGSKGTPNYTGALPGPPGDKGRDG
DHGQTGSPGNIGPKGLRGLHGLRGPQGVEGPKGVKGSPGDPGRSPRGEIGEQGPPGLPGP
PGPEEQKGYPSEQFFQKGEKGNKGQHGPCGLKGRRGVGGDIYSPSQTGPKGEQGILGFPG
DRGSPGQSGGVGLTGQEGVPGDKGLPGLIGRKGEKGWPGDPGPPGFPQFHNGSTVRGPKG
DRGYPGAPGFPGETGYMGVPGPPGPPGLPEAHGRPGQPGDPGEKGQKGEPGTYDPNEILF
IQGPKGVKGHQGERGRDGCPGPQGCGNYYCEPGSLGEPGEDGPRGFSGNKGLKGVKGCPG
ECKCVHALGAVGPPGPPGYPGSPGFPGAPGPQGEPGLRGNDGPRGPDGAPGFTGLKGRKG
EKGDTYVRGTKGAKGDKGEPGYAGPPGGTGESGKDGFPGPVGEPGPPSSGYMGRPGPKGY
PGPPGPKGFPGPLGSPGPGFPGLKGEPGLQGNQGLPGLPGIPGRLGPPGETEPCCHEGQI
GPPGPKGEPGLPGVQGQPGRDGYPGNPGHQGPKGIKGDDGETLIGPPGSIGTNGDPGDPG
PAGISLDGPEGLPGLPGPHGRKGDPGHILSAWPGPVGPPGPRGAVGSYGIPGIPGHPGSP
GLQGPPGPQGRKGDPGDSGDLGDTGVPGPPCTVCELVGPPGPPGPSGRRGEQGVPGLPGQ
KGVKGDVGAPGRGQKGLKGNPGIPGAPGPAGSPGVVGPQGDPGIHGFPGQKGEKGLPGKP
GSRSMPGNPGPPGQPGEKGERGFPGRYGTTGDPGFPGNKGSPGPTGLPGLCSLVNVTKGP
SGFSGRRGPPGQTGFAGYKGSTGTPGDLGPDGWPGSQGLKGFAGIPGREGLSGLRGLHGI
KGFPGPRGYSGNTGDQGDPGPPGQIGIPGLPGFPGVKGNKGQSYGRPGPQGLKGLPGEIG
PSPHRGSPGHPGDPGCRGRQGQPGHPGATGETGRQGGPGSPGSRGLPGRQGIRGPPGDEG
IVGPPGPPGPWGNPGPPGTPGLDGLNGLRGPKGMKGADGQGTSGPRGQKGLPGAKGARGI
SGPAGATIPGVKGQTGAPGNTGFPGIPGTPGSSGKTCQNPLHGPQGDRGYEGLPGPSGPP
GPPGPPGGSISYKGDLGPDGHRGPPGHRGNKGVPGPPGPRGQSGSPGPKGEKGPDGPKGP
LGSRGQQGISGPQGCKGEIGPIGDPGVKGQPGDLITVDLRVPPPGAPGPKGVSGSEGSQG
YVGRPGPFGRTGQKGPKGFVGFPGTPGPPGLDGSSGDPGDVGERGYTGPQGAPGPPGDPG
EPGHRRQLRSGFLLVIHSQSVLVPQCPAGSNQLWVGYSLVYLEGQEKAHTQDLGQPGSCL
PVFSTMPFSYCDKDACYYSSRNDKSYWLSTTAPIPMMPLFGQEISLHISRCVVCETFSPA
VPFHSQDQAIPPCPDGWKSLWTGYSFLLHTGAGDEGGGQSLASSGSCLRDFRTHPFIECQ
GAQGSCHYFSNLYSFWLTTVRDREDFVPVKPGTIKAADQQRHKASRCNLCLRD
NT seq 5022 nt   +upstreamnt  +downstreamnt
atggcgttcaaagtaactttcatgatgttttttacctcctggtggttcattttcctggtc
atccatgtgcagctgctgaaatcaggtaaaattgaaggcccgtgtcaaggcagagactgc
tctcagtgtgtgtgtcatcctgctaaaggtgcaaggggacctccagggaaaccagggagg
caaggtattcaaggtccaatgggacaacgaggacgaactgggcctcaaggggagaaggga
acagtgggcgcagcaggatcacatggcctacaggggccaaaaggagaccgtggtttgact
ggtgttcctggtttcacgggtcatgaaggatttccaggccaccctggagcagggggtgag
cctggtttaccaggactggatggctgtaatggaacaagaggtcatccaggaccggatggt
ctgcctggactggatggcctccatgggccacctggaccaaagggtgctaagggaagcaaa
ggaacgcctaattacactggtgctcttccaggtcctcctggtgataaaggtagagatgga
gatcatggtcaaacaggaagcccagggaacattgggcctaagggtctccgtggccttcac
ggacttcgtgggcctcagggtgtagagggtcctaaaggtgtgaaaggatcacctggtgac
cctggaagatcgcctagaggtgaaattggtgaacaaggcccacctggactacctggccca
cctggaccagaagaacagaaaggatatccttcagaacaatttttccaaaagggtgagaag
gggaataaaggtcagcacggaccatgtggactaaaggggcgtcgaggtgttggaggagat
atctacagccctagtcaaacaggacctaaaggagagcagggaatcctgggatttccaggg
gacaggggtagtcctggacagtctggtggagtcggattaactggacaagagggtgtccct
ggagacaaaggacttccagggctcattggcagaaaaggagaaaagggttggccaggggat
ccaggtccccctggttttccacaatttcataatggaagtactgtgagaggtcctaaagga
gaccgtgggtatccaggtgcacccgggttccccggagagactggctatatgggtgtacca
ggccctccaggcccaccaggtttaccagaggcacatggccgacctggtcaaccaggtgac
cctggtgaaaagggtcagaagggagagccagggacatacgatccaaatgaaatacttttc
attcagggaccaaagggagtaaaagggcatcaaggagaaagaggccgcgatggatgccct
ggtccacaaggatgtggaaattattactgcgagcctggttctctaggggaacctggtgaa
gatggacccagaggattttctggaaacaaaggcctaaaaggagtaaaaggttgtccaggg
gaatgtaagtgtgtgcatgctcttggggctgttgggccacctggtccacctggttatcca
ggatctccaggatttccaggagctccgggacctcagggggagcctggactgagaggaaat
gatggcccaagaggaccagatggcgcacctggtttcacaggtctaaaaggaagaaagggt
gagaaaggtgacacgtatgtgaggggtactaaaggtgcaaaaggggacaaaggagaacca
ggatacgctggtcctccaggaggaacaggtgagtctggaaaagatggcttccctggtccg
gtgggagaacctggtccaccaagttctggctatatgggacgtcctggacccaaaggttat
ccgggccccccagggcccaaaggattccctggcccccttggttccccaggtcctggattt
ccaggtctaaagggagaacctggacttcaaggaaatcagggacttccagggcttcctgga
atcccaggacgactaggtccaccaggtgaaacagaaccatgctgtcatgaaggccaaatt
ggaccaccagggcctaagggtgagccagggttaccaggtgttcaaggtcaacctggaaga
gatggatatccaggaaatccaggacatcaaggacctaaaggtataaagggagatgatgga
gaaactctgatcggaccaccaggatctattggtacaaatggagatccaggtgaccctggt
cccgctggcattagcctggatggccctgaaggtctccctgggttaccaggaccccatggc
agaaaaggagacccaggacacatcctttcagcttggccaggtccagttggtcctcctgga
ccacgaggagctgtggggtcatacggaattcctggaatccctggacatccaggatcacca
ggattacaaggcccaccaggaccccaaggtcgcaagggagatcctggggacagtggagac
cttggagatactggtgtcccaggtccaccgtgtactgtttgtgaactggtaggtccccct
ggacctccaggaccttcagggcgccgtggtgaacaaggagtgccaggcctccctggtcag
aaaggtgtgaagggagatgttggtgcacctggtcgaggacagaagggtttaaaaggtaat
cctggtattcctggggctcctggcccagctggatcaccaggggttgttggtcctcaagga
gaccctggtattcatggcttcccaggacagaaaggtgagaagggcttgcctgggaagcct
gggtctagaagtatgcctggcaatcctgggcctccagggcaaccaggtgaaaagggagaa
agaggttttcctggtcgttatggaactacaggtgatccaggatttcctggtaacaaaggc
tcacctggacccactggactcccaggattatgttcgcttgtcaacgtgacaaaaggtcct
tctggattttccggaagaagggggcctcctggtcagacagggtttgcaggatacaaaggc
agcactggcacgcctggtgatttgggtcctgatggatggccaggatcacaaggattaaaa
ggatttgctggtattccaggtagagaaggattatcaggactccgtggacttcatgggatt
aaagggttcccaggtccaagggggtattctgggaatactggagatcagggagatccaggg
ccaccaggacaaattggtatccctggcctccccggatttcctggtgtaaaaggtaataaa
gggcagtcctatgggagacctggcccacaaggactcaaaggattacctggggagattggg
cccagtccacatagaggaagtccagggcatccaggtgacccaggatgcaggggaaggcaa
gggcaacctggacatccaggggcgactggggaaactggaagacaaggagggccaggctct
cctgggtcccgaggtctaccagggcgtcaaggcattagaggtcctccaggtgacgaagga
attgtgggaccacccggcccccccggcccatggggcaatccaggtccccctggaactcca
ggtctggatggattgaatgggctaagaggtccgaaagggatgaagggagcagacggccaa
ggcacttcaggacctcgtggacaaaagggtttacctggagccaaaggcgcccggggcatc
tcggggccagcgggggcaactattccaggggtgaaaggccaaactggggcacctgggaac
acaggttttccaggaataccaggaacacctggtagctctggcaaaacctgccaaaacccc
cttcatggacctcaaggcgatagaggctatgaagggctcccaggaccctcaggtcctcct
ggtccacctggtccacctggtggcagcatttcatacaaaggagaccttggaccagatggc
catcgtggaccaccaggtcataggggaaataaaggcgttccaggacctccaggacctcgt
ggccaaagtggctctccaggaccaaagggtgagaaaggtcctgatgggccaaagggccct
ctgggatccagaggtcaacagggcatctctggacctcaaggttgtaagggagaaattggc
ccaattggagatccaggtgtcaaaggtcaacctggtgatttaatcactgtagatttaagg
gttcctccccctggagccccaggaccaaaaggcgtttcaggaagtgaaggaagtcaaggg
tatgtgggtcgtcctggtccttttggtcgaacaggacaaaagggtcctaaagggtttgtg
ggctttcccggtacaccagggccacccgggttagatggttccagtggagacccaggcgat
gttggtgagcgaggatacactgggcctcaaggtgcccctggtcctcctggtgatccaggc
gagcctggccatagaaggcaacttagatcaggctttcttttggttatccacagccagtca
gttttggtaccacagtgtcctgcaggtagcaaccagctgtgggtgggatacagtctcgtc
tacctggaaggacaagagaaggctcacacacaagatctgggtcagcctggctcttgtctc
cccgttttctccaccatgcctttctcctactgcgacaaagacgcatgctactactccagt
cgcaatgacaaatcctactggctttccactactgctcctataccaatgatgccactcttt
ggccaggagataagcctccacatcagccgctgtgttgtgtgtgagaccttttcaccagca
gtgccatttcacagtcaagaccaagcaattcctccctgcccagatggctggaagagttta
tggacaggatactccttccttctgcacacgggagcaggtgatgagggtggtggacaatcg
ttggcttcttctggtagctgcctcagggattttcgaactcatcccttcattgagtgtcaa
ggtgcgcagggttcctgtcactacttttccaatctttacagtttttggctaactactgta
agagatagagaggatttcgtccctgtaaagcctggtaccatcaaagcagctgatcagcag
cggcacaaggccagtcggtgtaatctttgccttcgggattaa

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