Poecilia mexicana (shortfin molly): 106925666
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Entry
106925666 CDS
T08022
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04510
Focal adhesion
pmei04512
ECM-receptor interaction
pmei04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106925666
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106925666
09142 Cell motility
04820 Cytoskeleton in muscle cells
106925666
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmei04147
]
106925666
00536 Glycosaminoglycan binding proteins [BR:
pmei00536
]
106925666
Exosome [BR:
pmei04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106925666
Glycosaminoglycan binding proteins [BR:
pmei00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106925666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106925666
NCBI-ProteinID:
XP_014855588
LinkDB
All DBs
Position
Unknown
AA seq
1673 aa
AA seq
DB search
MAFKVTFMMFFTSWWFIFLVIHVQLLKSGKIEGPCQGRDCSQCVCHPAKGARGPPGKPGR
QGIQGPMGQRGRTGPQGEKGTVGAAGSHGLQGPKGDRGLTGVPGFTGHEGFPGHPGAGGE
PGLPGLDGCNGTRGHPGPDGLPGLDGLHGPPGPKGAKGSKGTPNYTGALPGPPGDKGRDG
DHGQTGSPGNIGPKGLRGLHGLRGPQGVEGPKGVKGSPGDPGRSPRGEIGEQGPPGLPGP
PGPEEQKGYPSEQFFQKGEKGNKGQHGPCGLKGRRGVGGDIYSPSQTGPKGEQGILGFPG
DRGSPGQSGGVGLTGQEGVPGDKGLPGLIGRKGEKGWPGDPGPPGFPQFHNGSTVRGPKG
DRGYPGAPGFPGETGYMGVPGPPGPPGLPEAHGRPGQPGDPGEKGQKGEPGTYDPNEILF
IQGPKGVKGHQGERGRDGCPGPQGCGNYYCEPGSLGEPGEDGPRGFSGNKGLKGVKGCPG
ECKCVHALGAVGPPGPPGYPGSPGFPGAPGPQGEPGLRGNDGPRGPDGAPGFTGLKGRKG
EKGDTYVRGTKGAKGDKGEPGYAGPPGGTGESGKDGFPGPVGEPGPPSSGYMGRPGPKGY
PGPPGPKGFPGPLGSPGPGFPGLKGEPGLQGNQGLPGLPGIPGRLGPPGETEPCCHEGQI
GPPGPKGEPGLPGVQGQPGRDGYPGNPGHQGPKGIKGDDGETLIGPPGSIGTNGDPGDPG
PAGISLDGPEGLPGLPGPHGRKGDPGHILSAWPGPVGPPGPRGAVGSYGIPGIPGHPGSP
GLQGPPGPQGRKGDPGDSGDLGDTGVPGPPCTVCELVGPPGPPGPSGRRGEQGVPGLPGQ
KGVKGDVGAPGRGQKGLKGNPGIPGAPGPAGSPGVVGPQGDPGIHGFPGQKGEKGLPGKP
GSRSMPGNPGPPGQPGEKGERGFPGRYGTTGDPGFPGNKGSPGPTGLPGLCSLVNVTKGP
SGFSGRRGPPGQTGFAGYKGSTGTPGDLGPDGWPGSQGLKGFAGIPGREGLSGLRGLHGI
KGFPGPRGYSGNTGDQGDPGPPGQIGIPGLPGFPGVKGNKGQSYGRPGPQGLKGLPGEIG
PSPHRGSPGHPGDPGCRGRQGQPGHPGATGETGRQGGPGSPGSRGLPGRQGIRGPPGDEG
IVGPPGPPGPWGNPGPPGTPGLDGLNGLRGPKGMKGADGQGTSGPRGQKGLPGAKGARGI
SGPAGATIPGVKGQTGAPGNTGFPGIPGTPGSSGKTCQNPLHGPQGDRGYEGLPGPSGPP
GPPGPPGGSISYKGDLGPDGHRGPPGHRGNKGVPGPPGPRGQSGSPGPKGEKGPDGPKGP
LGSRGQQGISGPQGCKGEIGPIGDPGVKGQPGDLITVDLRVPPPGAPGPKGVSGSEGSQG
YVGRPGPFGRTGQKGPKGFVGFPGTPGPPGLDGSSGDPGDVGERGYTGPQGAPGPPGDPG
EPGHRRQLRSGFLLVIHSQSVLVPQCPAGSNQLWVGYSLVYLEGQEKAHTQDLGQPGSCL
PVFSTMPFSYCDKDACYYSSRNDKSYWLSTTAPIPMMPLFGQEISLHISRCVVCETFSPA
VPFHSQDQAIPPCPDGWKSLWTGYSFLLHTGAGDEGGGQSLASSGSCLRDFRTHPFIECQ
GAQGSCHYFSNLYSFWLTTVRDREDFVPVKPGTIKAADQQRHKASRCNLCLRD
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaaagtaactttcatgatgttttttacctcctggtggttcattttcctggtc
atccatgtgcagctgctgaaatcaggtaaaattgaaggcccgtgtcaaggcagagactgc
tctcagtgtgtgtgtcatcctgctaaaggtgcaaggggacctccagggaaaccagggagg
caaggtattcaaggtccaatgggacaacgaggacgaactgggcctcaaggggagaaggga
acagtgggcgcagcaggatcacatggcctacaggggccaaaaggagaccgtggtttgact
ggtgttcctggtttcacgggtcatgaaggatttccaggccaccctggagcagggggtgag
cctggtttaccaggactggatggctgtaatggaacaagaggtcatccaggaccggatggt
ctgcctggactggatggcctccatgggccacctggaccaaagggtgctaagggaagcaaa
ggaacgcctaattacactggtgctcttccaggtcctcctggtgataaaggtagagatgga
gatcatggtcaaacaggaagcccagggaacattgggcctaagggtctccgtggccttcac
ggacttcgtgggcctcagggtgtagagggtcctaaaggtgtgaaaggatcacctggtgac
cctggaagatcgcctagaggtgaaattggtgaacaaggcccacctggactacctggccca
cctggaccagaagaacagaaaggatatccttcagaacaatttttccaaaagggtgagaag
gggaataaaggtcagcacggaccatgtggactaaaggggcgtcgaggtgttggaggagat
atctacagccctagtcaaacaggacctaaaggagagcagggaatcctgggatttccaggg
gacaggggtagtcctggacagtctggtggagtcggattaactggacaagagggtgtccct
ggagacaaaggacttccagggctcattggcagaaaaggagaaaagggttggccaggggat
ccaggtccccctggttttccacaatttcataatggaagtactgtgagaggtcctaaagga
gaccgtgggtatccaggtgcacccgggttccccggagagactggctatatgggtgtacca
ggccctccaggcccaccaggtttaccagaggcacatggccgacctggtcaaccaggtgac
cctggtgaaaagggtcagaagggagagccagggacatacgatccaaatgaaatacttttc
attcagggaccaaagggagtaaaagggcatcaaggagaaagaggccgcgatggatgccct
ggtccacaaggatgtggaaattattactgcgagcctggttctctaggggaacctggtgaa
gatggacccagaggattttctggaaacaaaggcctaaaaggagtaaaaggttgtccaggg
gaatgtaagtgtgtgcatgctcttggggctgttgggccacctggtccacctggttatcca
ggatctccaggatttccaggagctccgggacctcagggggagcctggactgagaggaaat
gatggcccaagaggaccagatggcgcacctggtttcacaggtctaaaaggaagaaagggt
gagaaaggtgacacgtatgtgaggggtactaaaggtgcaaaaggggacaaaggagaacca
ggatacgctggtcctccaggaggaacaggtgagtctggaaaagatggcttccctggtccg
gtgggagaacctggtccaccaagttctggctatatgggacgtcctggacccaaaggttat
ccgggccccccagggcccaaaggattccctggcccccttggttccccaggtcctggattt
ccaggtctaaagggagaacctggacttcaaggaaatcagggacttccagggcttcctgga
atcccaggacgactaggtccaccaggtgaaacagaaccatgctgtcatgaaggccaaatt
ggaccaccagggcctaagggtgagccagggttaccaggtgttcaaggtcaacctggaaga
gatggatatccaggaaatccaggacatcaaggacctaaaggtataaagggagatgatgga
gaaactctgatcggaccaccaggatctattggtacaaatggagatccaggtgaccctggt
cccgctggcattagcctggatggccctgaaggtctccctgggttaccaggaccccatggc
agaaaaggagacccaggacacatcctttcagcttggccaggtccagttggtcctcctgga
ccacgaggagctgtggggtcatacggaattcctggaatccctggacatccaggatcacca
ggattacaaggcccaccaggaccccaaggtcgcaagggagatcctggggacagtggagac
cttggagatactggtgtcccaggtccaccgtgtactgtttgtgaactggtaggtccccct
ggacctccaggaccttcagggcgccgtggtgaacaaggagtgccaggcctccctggtcag
aaaggtgtgaagggagatgttggtgcacctggtcgaggacagaagggtttaaaaggtaat
cctggtattcctggggctcctggcccagctggatcaccaggggttgttggtcctcaagga
gaccctggtattcatggcttcccaggacagaaaggtgagaagggcttgcctgggaagcct
gggtctagaagtatgcctggcaatcctgggcctccagggcaaccaggtgaaaagggagaa
agaggttttcctggtcgttatggaactacaggtgatccaggatttcctggtaacaaaggc
tcacctggacccactggactcccaggattatgttcgcttgtcaacgtgacaaaaggtcct
tctggattttccggaagaagggggcctcctggtcagacagggtttgcaggatacaaaggc
agcactggcacgcctggtgatttgggtcctgatggatggccaggatcacaaggattaaaa
ggatttgctggtattccaggtagagaaggattatcaggactccgtggacttcatgggatt
aaagggttcccaggtccaagggggtattctgggaatactggagatcagggagatccaggg
ccaccaggacaaattggtatccctggcctccccggatttcctggtgtaaaaggtaataaa
gggcagtcctatgggagacctggcccacaaggactcaaaggattacctggggagattggg
cccagtccacatagaggaagtccagggcatccaggtgacccaggatgcaggggaaggcaa
gggcaacctggacatccaggggcgactggggaaactggaagacaaggagggccaggctct
cctgggtcccgaggtctaccagggcgtcaaggcattagaggtcctccaggtgacgaagga
attgtgggaccacccggcccccccggcccatggggcaatccaggtccccctggaactcca
ggtctggatggattgaatgggctaagaggtccgaaagggatgaagggagcagacggccaa
ggcacttcaggacctcgtggacaaaagggtttacctggagccaaaggcgcccggggcatc
tcggggccagcgggggcaactattccaggggtgaaaggccaaactggggcacctgggaac
acaggttttccaggaataccaggaacacctggtagctctggcaaaacctgccaaaacccc
cttcatggacctcaaggcgatagaggctatgaagggctcccaggaccctcaggtcctcct
ggtccacctggtccacctggtggcagcatttcatacaaaggagaccttggaccagatggc
catcgtggaccaccaggtcataggggaaataaaggcgttccaggacctccaggacctcgt
ggccaaagtggctctccaggaccaaagggtgagaaaggtcctgatgggccaaagggccct
ctgggatccagaggtcaacagggcatctctggacctcaaggttgtaagggagaaattggc
ccaattggagatccaggtgtcaaaggtcaacctggtgatttaatcactgtagatttaagg
gttcctccccctggagccccaggaccaaaaggcgtttcaggaagtgaaggaagtcaaggg
tatgtgggtcgtcctggtccttttggtcgaacaggacaaaagggtcctaaagggtttgtg
ggctttcccggtacaccagggccacccgggttagatggttccagtggagacccaggcgat
gttggtgagcgaggatacactgggcctcaaggtgcccctggtcctcctggtgatccaggc
gagcctggccatagaaggcaacttagatcaggctttcttttggttatccacagccagtca
gttttggtaccacagtgtcctgcaggtagcaaccagctgtgggtgggatacagtctcgtc
tacctggaaggacaagagaaggctcacacacaagatctgggtcagcctggctcttgtctc
cccgttttctccaccatgcctttctcctactgcgacaaagacgcatgctactactccagt
cgcaatgacaaatcctactggctttccactactgctcctataccaatgatgccactcttt
ggccaggagataagcctccacatcagccgctgtgttgtgtgtgagaccttttcaccagca
gtgccatttcacagtcaagaccaagcaattcctccctgcccagatggctggaagagttta
tggacaggatactccttccttctgcacacgggagcaggtgatgagggtggtggacaatcg
ttggcttcttctggtagctgcctcagggattttcgaactcatcccttcattgagtgtcaa
ggtgcgcagggttcctgtcactacttttccaatctttacagtttttggctaactactgta
agagatagagaggatttcgtccctgtaaagcctggtaccatcaaagcagctgatcagcag
cggcacaaggccagtcggtgtaatctttgccttcgggattaa
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integrated database retrieval system