Poecilia mexicana (shortfin molly): 106925670
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Entry
106925670 CDS
T08022
Symbol
rc3h1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmei03000
]
106925670 (rc3h1)
04121 Ubiquitin system [BR:
pmei04121
]
106925670 (rc3h1)
Transcription factors [BR:
pmei03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
106925670 (rc3h1)
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106925670 (rc3h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-CCCH
zf-C3HC4_2
Prok-RING_4
zf-CCCH_4
zf-CCCH_UNK
FYVE
zf_CCCH_4
NS3_helicase_C
Baculo_IE-1
RING_XB3-XBAT31
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
106925670
NCBI-ProteinID:
XP_014855592
Ensembl:
ENSPMEG00000008688
UniProt:
A0A3B3WWD0
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAISTD
IEQLPVNTALLQLVGGQVPKAQPVALITSPEDTQNYEVARHCVEELALYLKPLSNTRGVG
LSSTAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR
DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRMAGRSGVVFPDDGLTPDVTVTRKHSPVT
NGSVAPNLPQLVARGTDTVPYELLSKPAKLDGGSPSIPGSPPDVLDPMSKSSIPLPPHAM
AHPRIPADHLTGVKHIPGVARGSPVYPQPQPRDVYDIRPPPASQYEPPQYPGGYPYQQPT
QYVREYIRNPPPPSESGPPYHDPYSGYSAPDRPYPSQHSGPPFPYSHPSHYDRGHHSTYN
VPPPPPQPYPSQRDPLDVPPPSAGQANSLYHQEASSRDRYAPDGYYPPGSQPPPMRTYVR
GSQYSGSQPSLDYLHRRRQELLSQLAERKVISPPPFAASPTLSHPFPSDYPPEYGDESSK
TMKCREPDYAGQYSPWSCETIGSYINSKDAKPKNLMAPGTMEMMNVDDKGQREPSLEAPR
RGTEVKDDDPIIPFGPQPTVSRFGAISRTSKTGYQTTGPVQAMASTLQNPNSKHMTMPDY
SYGSHGAWAGASYPSHHTASSSQGHFERLPMTTPDREQLKIELQQVNQQITQQTQMHNIE
AASNSLLLQREASALVIQPVQPSQGPAAVVPQQPQPKWPVGGAGVPAVSNEQLSLELHQV
EREIGKRTREMALQENQVAHDVQQYKMQPAENGQPEHENQLEEMSLALGEVSNGSSSLQE
NAVGGSMLSLTNKTAGLSMCSDPVVAGSEMQKNGVVHSCS
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaagcgccacaatggacagagtttctgctgtgcccaatctgcacacagacc
tttgaagagactgttcgccggcccatcagcttgggttgtggacatactgtgtgcaagatg
tgcctgaacaagttgcaccgcaaggcctgtccctttgaccagacggccatcagcacagac
atcgaacagttacctgtgaacacagccctgttgcagctggtgggaggccaggttcccaag
gctcagccggttgccttgatcacaagtccagaggacactcagaactatgaggtggctaga
cactgtgtggaggagctggccctctacctcaaacccctcagcaacacccgaggtgtgggt
ctgagcagcacagcccaaagcatgctgagtcgacccatgcagaggaaattggtaactctg
gtccactgccagctggtggaggaggagggacgggtcagagccatgagagcggcgcgctct
cttggcgagcgaactgtcactgaactcatcttgcagcaccagaatccccagcagctgtcc
tctaatctgtgggccgctgttcgtgcacggggctgtcagtttctaggcccagcaatgcag
gaggaagccctgaagttggttctcctcgctttggaagatggttcggctttgtccagaaaa
gtcttggttctttttgtagtccaaaggcttgaaccacgctttcctcaggcctcgaaaacc
agcataggccatgtggtacagctgctttacagagcttcctgcttcaaggttaccaaacgg
gatgaagactcatctctcatgcagctgaaagaggagtttcgtacgtacgaggctctgcgg
cgggagcatgactctcagattgttcagatcgccatggagggggggttgcgcatcgcgcct
gaccagtggtcttctctgttgtatggagatcagtcacacaagtcacatatgcagtctatc
atagataagctgcagaccccggcatcttttgctcaaagtgtgcaggagctgacaattgca
ctgcaaaggactggggacccagccaacctcaacagactacgaccccacttagagctgctg
gcaaacatcgatcccagtcccgatgctcctccaccaacatgggagcagcttgagaagggg
ttggtagcagtgaaaacagtggtccatggcctggttgatttcattcaaaaccacagcaaa
aaaggagctgatcctcaacagcctcctcagcacagcaaatataaaacatacatgtgtcgt
gacatgaagcagaaaggcggctgtcctcgtggcgccagctgtacctttgcccactctcag
gaagaactagagaagtatcgtaagatgaataagcgcatggcgggtcgctcaggagtggtg
tttccagacgacggccttactcctgatgtaactgtgacccgaaagcattcgccagtcacc
aatggcagcgtcgcgccgaacttgccccaattagtcgcccgcggcaccgacacagtccca
tatgagttgctgtctaaacctgccaagctggacggaggaagtccaagtattcctggatcg
ccaccagatgtcctggaccccatgtctaaaagcagtataccactgccacctcatgcaatg
gctcaccccaggataccagcagatcacctcacaggggtcaagcatatccccggggtcgcc
aggggctctccagtttatcctcaaccacaaccccgtgacgtatatgacattcgtccccca
cctgcctctcagtatgagccgccacagtacccaggaggttatccctaccaacagccaaca
cagtatgtccgggaatacatccgtaacccccctccgccgagtgagtcaggacccccttac
catgacccttacagcggctacagcgctccggaccgcccctacccctcccagcactctggc
ccaccttttccctactcccacccatctcactatgacagaggtcaccacagtacctacaac
gtccctcccccgccccctcagccttatccgtctcagagggatcccctcgatgtcccgccc
ccctcagcggggcaggccaactctctctaccaccaagaagcgagttcccgggacagatac
gccccagacggctactatcctccgggttcccagcctccacctatgaggacctacgtcagg
gggtcacaatacagcggttcacagcccagcctggactatctccaccgacgacggcaggaa
ctgttatctcagctggcagaaaggaaggtgatctctcctccaccatttgctgcctccccc
actctttcacatcccttccccagcgactacccccctgagtatggcgacgagagctccaaa
acgatgaaatgcagagagcccgactacgcggggcagtactcgccctggtcctgcgaaacc
attggctcttatattaactcaaaggatgccaaacctaagaaccttatggctcctggtacc
atggagatgatgaatgtggacgataaaggtcagagggagccatcattggaggcccctcgc
aggggaacagaagtgaaagatgatgaccctattataccttttggcccccagcccactgtg
tcacgctttggcgccatctcccgcacttcaaagactggctatcagaccactggcccagtg
caagctatggcttccactcttcagaaccccaactctaaacacatgaccatgcctgattac
tcatatggaagtcatggagcatgggctggagcttcatacccctcccaccacactgcctcc
tcctctcagggacactttgagcgccttcccatgacaaccccagatagagaacagttaaag
attgagctgcagcaggtcaatcagcagatcactcaacagactcagatgcacaacatagag
gccgccagtaactctttgctcctgcagagggaggccagcgcattggtcatccagcctgtg
caacccagccagggcccagcggcagtggttccacagcaaccgcagcctaaatggccagta
gggggtgccggtgtgccagctgtctccaatgagcagttaagcttggagctccaccaggtg
gagagagaaattggcaagaggacccgagagatggctttgcaggaaaaccaagtagctcat
gatgttcaacagtacaaaatgcagcctgcagagaatggacaaccagagcacgagaaccag
ctggaagaaatgtctctggctctcggcgaagtgtccaacggctccagcagtctgcaagaa
aatgcagtgggtgggtccatgctgtcgctgaccaataagacggctggattgagcatgtgt
tctgatccagttgttgctggttcagagatgcagaagaatggcgttgtccactcctgctca
tag
DBGET
integrated database retrieval system
