Poecilia mexicana (shortfin molly): 106926137
Help
Entry
106926137 CDS
T08022
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmei04040
]
106926137 (trpc1)
Ion channels [BR:
pmei04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106926137 (trpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
106926137
NCBI-ProteinID:
XP_014856303
Ensembl:
ENSPMEG00000014721
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MHISAWPYSLSVVMAALYQGTDTSSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNVNCVDVLGRDAVTITIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAVSPPLLQKLMQRIQNPEYSTTMDVAPVILAAHRNNYEIL
TMLLKQDISLPRPHAVGCECMLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPIL
RAFELSADLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSDDHV
DKRGLLEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKMGTVL
SLALLWPLLSICYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGKKNM
MGPPLEMIDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFTLRIV
AHSKFKNCKNDTDTSTPERKDWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQ
ISMGQMLQEFGKFLGLFLLVLFSFTIGLTQLYGKDHAKDTKDQINHTKDCEGIFCEQQSN
DAFHTFMGTCYALFWYIFSLAHVALFVTRISYTEELRSFVGALIIGTYNIVVVIVLTKLL
VAMLHKSFRQIANHEDKEWKFARAKLWLSYFDDKCTLPPPLNVLTSPKTVCYLVTSLRKW
ICSHTTKGKVKRQNSLKEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSMDQATVENL
NDLRQDLSKFRNEMRDLLGFRTSKYAMFYPRS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgcttggccgtactcgctctccgtcgtaatggcagctctttaccagggc
acggacacctcctcccccgacaaattcctggccttgaaagacgtgagagaagtaaaagag
gagacgacgctggacgagaagctcttcctgctggcatgcgagaaaggtgactattacatg
gtgaagaagctgctggaggagaaccgccatggggagctcaacgtcaactgtgtggatgtg
ctgggccgggacgcggtgaccatcaccatcgagaacgaaaacctggacatcctgcagctt
ctgctcgagcacggctgccaggccacagatgccctgctggtggccatagactcggaggtt
gtgggtgccgtggacatcctcctcaaccacagaccaagacgctcctccaagccctctatc
gctgtaagtcccccgttattgcagaaactgatgcagcggatccagaacccagagtactcc
accaccatggatgtggctcctgttatcctggcagcacacagaaataattatgagatcctc
accatgctgctaaaacaggacatctccctccctcggcctcacgctgtcggctgcgagtgc
atgctgtgcaatgctaaaaacaagaaggacagcttaaggcactccaggttccgactcgac
atctaccgctgcctggcgagcccctcccttatcatgctgaccgaggaggaccccatactg
cgagcatttgagctgagcgcagacttgaaggagctcagccttgtcgaggtcgaattcagg
aatgactacgaagagctggcgaaacagtgcaagatgtttgccaaggatcttctggctcag
gctcgaaactctcgagagctggaagtgattctcaatcacacctccagcgacgatcatgtc
gacaagaggggcctgctggaggagcgcatgaaccttagccggcttaagctggccatcaag
tacaaccaaaaagagttcgtggctcagtccaactgtcagcagttcctcaacaccgtctgg
ttcggagagatggccagctaccgacggaagcacacctgtttgaagatgggcacggttctg
agcctggcgctgctctggccgctcctctccatctgctacctgctggtgccccgctcccga
gtcggccaaataatccacacgccgttcgtgaagttcatcatccacagcgcctcttatttc
accttcctgctgctgctcaacctgtattctctggtctacaatgagggcaagaagaacatg
atgggccccccactcgagatgattgattacctgctgatcctctggatcataggaatggtg
tggtcggacgtgaaacgtttgtggtacgaagggctggaagactttctggaagagtccagg
aaccagctgagttttgtgatgaattctctctacctggcaaccttcactcttagaatagtt
gctcatagcaagttcaaaaattgcaaaaatgatacagacacatccacaccagagaggaag
gactgggacgccttccatcccatcctggttgccgagggcctcttcgcctttgccaacgtt
ctgagttacctgagactcttcttcatgtacaccaccagctccattctggggccactgcag
atctccatgggtcagatgctgcaggagtttgggaagtttctgggcctcttcctgcttgtg
ttattctccttcaccattgggctgacccagctctatggaaaagaccacgctaaagacaca
aaggaccagatcaatcacaccaaggactgtgagggcatcttctgcgagcaacagagcaac
gatgcatttcacacgtttatggggacctgctatgctctgttctggtacattttctccttg
gcgcacgttgcgctcttcgtcacccgcatcagctacacagaggagctgcgctcctttgtt
ggtgccctgatcataggcacctacaacatcgtggtggttatcgtgctgaccaagctgctc
gtggccatgctccataaaagcttcagacaaattgctaatcatgaggataaggagtggaag
tttgcacgggccaaactgtggctcagctactttgacgacaagtgcaccctgccccctcct
ctcaatgtcctaacctcgccaaaaaccgtctgctacctggtgaccagcctgaggaagtgg
atctgctctcacaccacaaagggcaaagtgaagagacagaacagtctcaaggagtggaaa
aacctgaaacagaagcgtgacgagaactaccagaagatcatgtgctgtctggtacaccgc
tacctgacctccacgcggcagaagatgcagagcatggatcaagccacggtggaaaatctg
aacgacctacgccaagacctgtccaagtttcgcaacgagatgagggacctgctgggcttc
cggacatccaaatacgccatgttttacccaaggagttaa
DBGET
integrated database retrieval system
