Poecilia mexicana (shortfin molly): 106926552
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Entry
106926552 CDS
T08022
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04136
Autophagy - other
pmei04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106926552 (atg13)
04136 Autophagy - other
106926552 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106926552 (atg13)
03029 Mitochondrial biogenesis [BR:
pmei03029
]
106926552 (atg13)
Membrane trafficking [BR:
pmei04131
]
Autophagy
Autophagosome formation proteins
ULK complex
106926552 (atg13)
Atg1 complex
106926552 (atg13)
Mitochondrial biogenesis [BR:
pmei03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106926552 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
106926552
NCBI-ProteinID:
XP_014857028
Ensembl:
ENSPMEG00000022121
UniProt:
A0A3B3XVN9
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MDGDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLGGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSSRQFERSAPIMGIIVDHFVDAPCGNQRPITMGQPCNYRAPDED
DGGAFAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPLAPGLVTHNL
YASRLSYQPAPTGGAAEFNTNQVKEGGNVLVPAQPPHGADVHLTVENAPNTPSSSGDEDG
LLQSGEGRRDDGRRSVSPSDPVETLNAFTRKVGAFVNKPNTQITAASLDLPFAAFAPRGL
DSEENDPMVRPPDSPPSQSPLQASLHSQGSDGSGPQDDFVMVDFRPAFSKDDLLPMDLGT
FYREFQNPPQLASLSLHTSSQSMADDLDSLPEKLRVYEKNIDEFDAFVDMLQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgacctgagtccacaggataagaaagacttggacaagttcatcaagtttttt
gccttaaagactgttcaggtgatcgttcaggctcgcctgggggagaagatctgcactcgc
tcgtcttcgtcgcccactggctcagattggttcaacttggccatcaaagacatcccagag
gtcactcatgaggccaagaaggcgctggccggccagcttccaggcatcggccgatccatg
tgtgtggagatctccctaaagacctcagagggagactccatggagttagagacttggtgc
ctggagatgaacgagaagtgcgataaggacattaaagtgtcgtacactgtctataaccgg
ctgtctgtcctcctaaaatctctgctggccatcaccagagtgactccagcctataagctg
tccagaaagcagggccacgactacgtcatattgtacaggatctactttggggaagttcag
ctgggtggattaggagaaggtttccaaacggtgcgcgtcggtgttgtcggcaccccggtt
ggcacggtaacgctgtcatgtgcctaccgcaccaacctggcgttcatgtccagcaggcag
tttgaacggtcggctcccatcatgggaatcatcgtggatcactttgtggacgcgccctgc
ggcaatcagcgtccaatcacaatggggcagccctgcaactacagagccccggatgaggac
gacggcggagcgtttgctggagttcaggactctcaggaggtctgcaccacctccttctcc
acctcccctccctctcagtgtgtctgcactctgagtccgtccccttccaaactgtccaag
cccctcccgctggacagtctccagctcccattggctccaggacttgtcactcacaatctc
tatgcttccaggttgtcctaccagcctgcacctacaggaggagctgctgagttcaacaca
aaccaggtgaaagaaggcgggaacgttctggttccggctcagcctcctcatggagcggat
gtccatctgaccgtagaaaacgctccaaacacaccgagcagcagtggcgatgaagacggc
ctgctgcagagtggtgagggaagacgggacgatgggaggaggagcgtctctccctctgac
ccggtggagaccctcaacgcgttcaccaggaaggtcggggcttttgtgaataaacccaac
actcagatcacagctgccagtctggatctcccattcgctgcgtttgctcctcgtggcctg
gactctgaggagaacgatcccatggtgcgtcctcctgactctcctccttcccagtcgccc
ctgcaggccagccttcactctcagggctcggacggatcgggaccgcaggacgacttcgtc
atggtcgactttcgtccagctttctctaaagacgaccttttgccgatggatctgggcact
ttctaccgagagtttcagaaccctccgcagctggccagcctctcgctgcacaccagctcc
cagtcgatggctgacgacctggactctctgccggagaaactgcgcgtgtatgagaagaac
atcgacgaatttgacgcgtttgtggacatgcttcagtag
DBGET
integrated database retrieval system
