Poecilia mexicana (shortfin molly): 106926606
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Entry
106926606 CDS
T08022
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04142
Lysosome
pmei04144
Endocytosis
pmei05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106926606
04142 Lysosome
106926606
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
106926606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106926606
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmei04147
]
106926606
Membrane trafficking [BR:
pmei04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
106926606
Exosome [BR:
pmei04147
]
Exosomal proteins
Proteins found in most exosomes
106926606
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
RMC1_N
RtcR
Motif
Other DBs
NCBI-GeneID:
106926606
NCBI-ProteinID:
XP_014857122
Ensembl:
ENSPMEG00000020785
LinkDB
All DBs
Position
Unknown
AA seq
1663 aa
AA seq
DB search
MESDKFICIREKVGEQNQVVIVDMSDPNNPIRRPISADSAIMNPTSKVIALKDAAKTLQI
FNIEMKSKMKAHTTTEEVMFWKWISVNTVALVTDTAVYHWSMEGDSQPTKVFDRHASLAG
CQIINYRTDEQQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFGEFKVEGNA
KPSTLFCFAVRSQAGGKLHIIEVGQPAAGNQPFAKKAVDVFFPPEAQTDFPVAMQIGNKH
GVIYLITKYGYIHLYDLESGVCIYMNRISAETIFVTAPHEATSGIIGVNKKGQVLSVCVE
EENIVNYATNVLQNPDLALRMAVRSNLVGAEELFARKFNTLFAQGSYSEAAKVAASAPKG
ILRTAETIRKFQSVPAQPGQASPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEK
WLKEDKLECSEELGDLVKASDPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVGY
TPDWVFLLRNVMRVNPDQGLQFAQMLVQDEEPLANINQIVDVFMEGSLIQQCTSFLLDAL
KNNRPAEGHLQTRLLEMNLIHAPQVADAILGNQMFTHYDRAHVAQLCEKAGLLQRALEHY
TDLYDIKRAVVHTHLLNPEWLVNFFGSLSVDDSLECLRAMLSANIRQNLQLCVQVASKYH
EQLGTQSLVELFESFKSYEGLFYFLGSIVNFSQEPDVHFKYIQAACKTGQIKEVERICRE
SNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPS
RLPVVIGGLLDVDCSEDVIKNLIMVVRGQFSTDELVDEVEKRNRLKLLLPWLESRIHEGC
EEPATHNALAKIYIDSNNTPERFLKENPFYDSAVVGRYCEKRDPHLACVAYERGQCDLDL
IKVCNENSLFKSEARYLVRRKDPELWAKVLEEDNPFRRQLIDQVVQTALSETQDPEEVSV
TVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNY
DAPDIANIAISNELFEEAFAIFKKFDVNTSAIQVLIEHIGNLDRAYEFAERCNEPAVWSQ
LARAQLHRDLVKEAIDSYIKAVDPSAYMEVVNAASKNDNWEDLVKFLQMARKKARESYVE
TELIFALAKTNRLAELEEFVSGPNNAHIQQVGDRCYEEGMYEAAKLLFNNVSNFARLAST
LVHLGEYQAAVDSARKANSTRTWKEVCFACVDGEEFRLAQICGLHIVIHADELEDLISYY
QDRGYFEELIALLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLR
AAEQSHLWAELVFLYDKYEEYDNAVITMMNHATDAWKEGLFKDIIAKVANVELYYKSLSF
YLEYKPLLINDLLTILSPRLDHNRAVSFFSKMNQLKLVKPYLRSVQNHNNKAVNEALNNL
LTEEEDYQSLRASIDAYDNFDTIDLAQRLEKHELIEFRRIAAYLYKRNNRWRQSVELCKK
DKLYKDAMLFAAESKDAELAETLLQWFLQEDRKECFAACLFASYDLLHPDVVLELAWRHN
IMDFAMPYFIQVMREYLTKVDEFAAKVDKLEEAESQRKTEDDVKEPQPMVFGQQLMLTAA
ASPVAAQPPYPTYGYPPAAAAAAAAAPPAAAGYPAQPAYGFNM
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagacaagttcatctgcatccgggagaaagtgggcgagcagaaccaggtggtg
atcgttgacatgtccgaccccaacaacccaatcaggaggcccatctccgctgacagcgcc
attatgaaccccacaagcaaggttatcgcgctgaaagacgctgccaaaaccctgcagatt
ttcaacatcgagatgaagagtaagatgaaggctcacaccaccacggaggaggtcatgttc
tggaagtggatatctgtgaacaccgtcgccttggtgacggacacggcggtctaccactgg
agcatggagggggattcccaacccaccaaagtgttcgatcggcacgccagcctggcggga
tgtcagatcatcaactacagaaccgacgagcaacagaagtggttactgctgatcgggatt
tctgcacagcaaaatcgcgtagtcggggcgatgcagctgtactcggttgacaggaaagtc
tcccagcccatcgagggccacgccgctgccttcggggagttcaaagtggagggaaatgcc
aaaccttccacgttgttctgctttgctgtgcgctcacaggcgggaggaaagttgcacatc
attgaagttggtcagcccgctgcaggaaaccagccatttgctaagaaagcagtggatgtg
tttttccctccagaggcccagacagacttccctgtagctatgcagattgggaacaagcat
ggtgtgatatatttgatcacaaaatatggttacattcacctgtacgacctggaatctgga
gtgtgtatatacatgaaccgcatcagtgcagagactatctttgttacggcccctcatgag
gccacctcagggatcatcggtgttaataagaagggacaggtcttgtcagtgtgtgttgaa
gaagaaaacatagtcaactatgccacaaacgttctgcagaaccctgatctcgccctgagg
atggccgtgaggtctaatcttgttggggctgaggagctttttgccagaaagtttaatact
ctgtttgcccagggaagttactcagaggctgcaaaggttgctgcatctgcacccaagggt
atcctccgaacggcagaaaccattcgcaagttccagagtgtcccagcccagccgggtcag
gcctcacccctgctccagtacttcgggattcttttggaccagggccagctcaacaagttt
gagtctctggagctgtgcaggcccgtcctgcagcagggccgcaagcagctcctggagaaa
tggctgaaggaggacaagctggagtgttcagaggaactgggcgatctggtaaaggcctcg
gacccaacactagctcttagtgtttatctcagagcaaatgtccccaacaaagtcattcag
tgctttgcagaaacaggacagttccagaagatagtgctgtatgccaaaaaggtgggctac
accccagactgggtgtttttgctgaggaacgtaatgcgagtcaacccagaccaaggactg
cagtttgcccaaatgcttgtccaagacgaggagccgctggccaacatcaaccagattgtt
gatgttttcatggagggcagcctgattcagcagtgtacttccttcctgttggatgctctg
aagaacaaccgtccagctgaaggacacttacagacacgtctgcttgagatgaacctgata
cacgctccccaggtagcagatgccatcctggggaaccagatgttcacacactatgaccgg
gcccacgtcgctcagctgtgtgagaaggcagggctgctgcagagagcactcgaacactac
accgacctgtacgacatcaaacgagccgtggtgcacacacatctgctcaaccctgagtgg
ctggtgaactttttcggctccttgtcagtcgacgactctttggagtgtttgagggccatg
ttgtcggccaacatcaggcagaacctgcagctgtgtgtgcaggtagcatcaaagtatcat
gagcagctgggaactcagtcgctagtggagctcttcgagtccttcaagagttatgaaggt
ctgttttacttccttggctccatcgtgaatttcagccaggaacccgacgttcactttaaa
tacatccaggctgcttgtaagacgggtcagatcaaagaagtggagagaatatgtagagag
agcaactgctacgacccagagagggttaaaaacttcctaaaggaggcgaagttaacagac
cagcttcccctcatcatcgtgtgcgatcgctttgacttcgtccatgatctggtgctctac
ctgtaccgcaacaatctgcagaaatacattgaaatctatgttcagaaagtgaatcccagt
cggttacctgtggtgatcggtgggttgttggatgtggactgttcagaggatgtcatcaag
aacctgatcatggtggtcagaggacagttttccaccgatgagctggtggacgaggtggaa
aagaggaacaggttgaagcttctgttgccatggctggagtcgcgtattcacgagggatgt
gaggaaccagctacccacaatgcactggccaagatctacattgacagcaacaacacgccg
gagcgcttcctgaaggagaacccgttctacgacagcgccgtggtcggccgctactgcgag
aagagagacccccacctggcctgcgtggcgtatgagaggggccagtgcgacctggacctc
atcaaagtttgcaatgaaaattcattatttaagagtgaagctcggtatcttgtacgacga
aaagatccggagctctgggccaaagtgttggaggaagacaacccgttcagaagacaactc
atcgatcaggtggtgcagacggctctgtcggagacccaggacccagaggaggtgtcggtc
acagtcaaggcctttatgactgcagacctaccaaacgagctgattgagttgctggagaag
atcgttctcgataactctgtcttcagtgaacacagaaacctccagaatctgctgatttta
acggccatcaaggccgaccgcactcgtgtgatggagtacatcaacaggctagataactat
gacgctcctgacatcgccaacattgctattagcaatgagctctttgaagaggcgtttgcc
attttcaagaagtttgatgtcaacacctcagccattcaggttttgattgagcacataggg
aacttggaccgggcctatgagtttgcggagcgctgtaacgagcctgcagtgtggagtcag
ttagccagagctcagctgcacagggacctggtcaaggaggccatcgactcctacatcaaa
gccgtggatccatcagcgtacatggaggtggtcaatgcagccagcaagaacgacaactgg
gaggatttggtgaagttcctgcagatggctcgtaagaaggccagagagtcgtatgtagag
acggagctgatttttgctctggctaaaacgaaccgcctggctgagctggaagaatttgtc
agtgggcccaataatgctcacattcagcaggtgggagacagatgttacgaggagggaatg
tacgaagcggccaaacttttgttcaacaacgtgtccaactttgcccgacttgcgtctaca
ttagtccaccttggggagtaccaggcagccgtggacagcgccaggaaagcaaacagcact
cggacgtggaaggaggtttgctttgcgtgcgtcgacggcgaggagttccggttggcgcag
atctgtggccttcacattgtgatccacgccgacgagctggaggacctgatcagctactac
caggaccgcgggtactttgaggagctcatcgctctgctggaggccgcgctgggcctggag
cgcgcccacatggggatgttcacggagctcgccatcctctactccaaattcaaacctcag
aaaatgagggaacatctggagctcttctggtcacgagtcaacatcccaaaggttcttcgt
gcagctgagcaatctcatttatgggcagagctggttttcctttacgataaatacgaggag
tacgacaacgctgtcatcactatgatgaaccatgcaacagatgcatggaaagaaggcctg
ttcaaagacataattgccaaggtcgccaacgtggagttatactacaaatctctttctttc
tacctggaatacaaacctctgctcattaatgacctcctgactattttgtctccccggttg
gatcacaacagagccgtcagctttttctctaagatgaatcagctgaagttggtcaagccg
tacttgaggtcggtccagaatcacaacaataaggccgtcaatgaagcgctcaacaacttg
ctaacggaggaagaagactaccagagcctgagagcctccatcgatgcttacgataacttt
gacaccatcgacttggctcagaggttagagaaacatgaactgatcgagttcaggcgtatc
gctgcttatctgtacaaaagaaacaaccgctggaggcagagtgtggagctctgcaagaag
gacaagctatacaaggatgccatgctcttcgctgcagagtcaaaggatgccgagctggca
gagactctgctgcagtggttcctgcaggaagaccggaaggagtgctttgccgcctgcctg
ttcgcctcctacgacctcctccaccctgacgtggtgctggaactggcctggagacacaac
ataatggactttgccatgccctacttcatccaagtcatgagagagtacctcactaaggtt
gatgaatttgcagcaaaggtggacaaactagaggaggcagaaagccagaggaaaactgag
gacgacgtgaaagagcctcagccgatggtgtttggccagcagctgatgctgactgctgct
gcctctcctgtggcggctcagccaccgtacccaacttacggctatccccccgccgccgct
gccgccgccgccgccgctcctcccgctgccgcaggttaccccgcccagccagcctacggc
ttcaacatgtaa
DBGET
integrated database retrieval system
