Poecilia mexicana (shortfin molly): 106926920
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Entry
106926920 CDS
T08022
Symbol
trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106926920 (trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pmei04031
]
106926920 (trim23)
Enzymes [BR:
pmei01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106926920 (trim23)
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106926920 (trim23)
GTP-binding proteins [BR:
pmei04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
106926920 (trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
zf-RING_2
MMR_HSR1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
106926920
NCBI-ProteinID:
XP_014857597
Ensembl:
ENSPMEG00000008957
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MAAAAAGINKQGAVATMEPCLRHGRGANGSTVKVLECGVCEDVFSLQGDKVPRLLLCGHT
VCHDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGASNQSGMAE
DALKGMGECIIRCDEDESHTASMYCTVCATHLCAECSQLTHSTRTLAKHRRVPLADKPHE
KMLCPQHQVHAIEFVCLEEACQSGPLMCCVCKEYGKHQGHKHALLETEANQIRASILDMA
HCIRTFTDEVSEYSRKLVGIVQQIEGGEQIVEDGIGMAHTEHVPGTAESARSCVRAYFAD
LHETLCRQEEMALSVVDAHVRERLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVV
LAKQEINCLLETLQKQQHQFTELADHVQLDAGIPVTFTKDNRVHIGPKMEIRVVTLGLDG
AGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQA
VVYVIDSCHRDRLMEAHSELAKLLTEKELRDALLLIFANKQDVPGAVSVEEMTELLSLHK
LCCGRSWHIQGCDARSGMGLHEGLDWLSRQLVAAGVLDVA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctgcagcagggataaacaagcagggcgctgtagcgacgatggagccctgt
ctccggcacgggaggggagcgaatggaagcaccgtcaaggtgttggagtgtggtgtgtgt
gaggacgtcttctccctccaaggagacaaggtccctcgcctgctgctctgcggtcacacg
gtgtgccatgactgtctcacccggttgcccctgcatggcagagcggtccgctgccccttc
gacagacaggtcacagagctgggggactctggagtttggggtctaaagaagaactttgct
ctgctcgaactcttggagcgcctccagaatggagcaagcaaccagtccggaatggccgag
gacgccctgaaaggcatgggagaatgtataatccgttgcgatgaggacgagagccacacg
gcgtccatgtactgcacggtatgcgccacgcacctgtgcgccgagtgctcccagctcact
cactccacccgcacgctggccaaacatcgccgggtgccgctggccgacaagccccacgag
aagatgctgtgtccacagcaccaagtccacgccatcgagttcgtctgcctggaggaggcc
tgccagtcggggcctctcatgtgctgcgtttgcaaagaatacggcaagcaccaaggacac
aagcacgcgcttctggaaacggaagccaaccagatccgtgcgtccatcctggacatggcc
cactgcatccgaacgttcacagacgaggtgtccgagtattctaggaagctggtgggcatc
gtgcagcagatcgagggaggagagcagatagtagaggacggcatcggcatggcgcacacg
gaacacgtccctggaacggcggagagcgcgcgctcctgcgtccgtgcgtacttcgccgac
ctccatgagacgctgtgccgtcaggaggagatggccctgagcgtggtggacgctcatgtc
agggagaggctcatctggctgaggcagcagcaggaggacatgaccatcctgctgtctcag
gtctccaccgcctgcctgcactgcgagaaaaccctccagcaggacgactgccgagtggtg
ctggcgaagcaggagatcaactgtctgctggagactcttcagaagcagcagcaccagttc
acagagctggccgatcacgttcagctggacgccggcatccccgtcaccttcactaaggac
aacagagtccacatcggtccaaagatggagatccgagtcgtgactctgggactcgacgga
gcgggaaagaccaccatcctttttaagctgaagcaggatgagttcatgcagcccatcccg
accatcggtttcaacgtggagacggtggaatataaaaacttgaaatttacaatctgggac
gtgggaggaaagcataaactgagacctctctggaaacactattatctgaacactcaagcg
gtggtgtacgtgatcgacagctgccaccgagaccgactgatggaggcgcacagcgagctg
gccaagctactgacagagaaggagctgcgggacgccttgttgctcatcttcgcaaacaaa
caggacgttccgggcgccgtgtcggtggaggagatgacggagctgctgagtctgcacaag
ctgtgctgtgggagaagctggcacatccagggctgcgacgcccgcagcgggatgggcctc
cacgaggggctggactggctctccaggcagctggtggctgctggagtcctggatgtagct
taa
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integrated database retrieval system
