KEGG   Poecilia mexicana (shortfin molly): 106926950
Entry
106926950         CDS       T08022                                 
Symbol
wdr48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    106926950 (wdr48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmei03400]
    106926950 (wdr48)
DNA repair and recombination proteins [BR:pmei03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     106926950 (wdr48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_DCAF4 WD_LRWD1 Beta-prop_Vps41 Beta-prop_IP5PC_F WD40_RFWD3 WDR54 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 RAWUL WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 106926950
NCBI-ProteinID: XP_014857659
Ensembl: ENSPMEG00000007385
LinkDB
Position
Unknown
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QQKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHEEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCTTPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKGEDLGKVEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRTRIN
PMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSANDKPGEQEKEEDMAMLAEEKIELMCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggccacgcatcacaggcaaaatgctgctgggcggaggaaagtacaggtttcctacgtg
attagagacgaggtggagaagtacaatcgcaatggagtgaatgcactccagttagaccct
gctctgaaccggctcttcaccgcagggagagactccatcatccggatatggagcgtctac
caacaaaaacaggacccatacattgcatctatggagcaccacactgactgggttaatgat
atagttctttgctgcaatggaaaaacattgatatcagcttcatcagatactaccgtgaaa
gtatggaatgctcataaaggattttgtatgtcgacattacggacgcacaaggactatgta
aaagctttagcgtacgctaaggacaaggagttagtggcgtcggccggtctggaccggcag
atcttcctttgggatgtgaacacactgactgcactcaccgcttccaacaacacggtcacc
acttcgtcgctgagtgggaacaaggactccatctatagtctggccatgaaccagatggga
acagttatagtctccggatctactgaaaaggttttgagagtgtgggaccctcgaacgtgt
gcaaagctcatgaagctaaaaggtcacacagacaacgtcaagtcgttgctcctgaatcgc
gacggcactcagtgcctgtcggggagctcggacgggaccatccgcttgtggtcgctcggc
cagcagaggtgcatcgccacgtacagggtccatgaagaaggcgtctgggctctgcaggtc
aacgaggccttcacacacgtgtactctgggggcagggacaagaagatttactgcacggac
ctgagaaacccggacatccgtgtgctcatctgcgaggagaaggccccggtgctcaaaatg
gagctagacagatctgctgacccacctccagcgatctgggtttccaccaccaagtcatct
gtgaataaatggtcactaaagggaatgcacaacttcagatcatcaggggagtacgacaac
gactgcaccacccctctgactccactgtgtactcagccagaacaagttattaagggaggt
gccagtattatacagtgccacattctgaatgacaagagacacatactcaccaaagacacc
aacaacaatgtggcatactgggacgtgctcaaggcttgcaaaggagaagacttgggcaaa
gtggaatttgatgaggagattaaaaagcggttcaagatggtttacgtgccaaactggttc
tctgtcgatctgaaaaccggaatgctcacaattactctggatgagagtgattgctttgct
gcttgggtgtctgcaaaggatgctggattttcaagttctgacggatctgatccaaagttg
aacttgggtggcttgttgctccaagctctgctggagttctggcccagaacgcgcatcaac
cccatggacgaggaagaaaacgaggtgaaccacgtgaacggtgagcaggagaacagggtg
cagaaaggaaacggatatttccaggtcccacctcacacgcccgtcatctttggagaagca
ggaggaagaactctctttaggctgctatgtagagattcaggcggcgagactgaatccatg
ctgctgaatgagacagtcccacagtgggtcattgatataactgtagataaaaatatgccc
aaattcaacaaaatcccattctacctccagccccattcttcttctggtgcaaaaactcta
aaaaaggaccgtctctcggccagtgatatgctccaggtgaggaaggtgatggagcacgtt
tacgagaagatcataaacctggacaacgagtcgcagaccaccagctcctcggccaacgac
aaacccggagagcaggagaaggaagaagacatggcgatgctcgccgaggagaagattgag
ctaatgtgtcaagaccaggttctagaccccaacatggacctgcggacagttaaacatttt
atctggaagagtggaggggacttgacacttcactataggcagaagtcgacatga

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