Poecilia mexicana (shortfin molly): 106927027
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Entry
106927027 CDS
T08022
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmei03000
]
106927027
Transcription factors [BR:
pmei03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
106927027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_9
PAS_2
HLH
Motif
Other DBs
NCBI-GeneID:
106927027
NCBI-ProteinID:
XP_014857799
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MALWCDACKSPVSSPCTSHHPPGDQRRSACRRFRSTKGASKARRDHINHEIRNMRSLLPI
SQEDQERLSYLHSMAAICTYIRKSVLFQGLPAGERSRSALQYEAFLDALHGFILVTTAQG
RLVYVSENVAEYLGLSMVDVLQGDTIYDLVERSDVDVIRSNLDTESSLFSERSFVCCMLA
SKAFKLQFGSCCSMLVRGNFRFFPQPSSAAAPTIQPLFVALCTPTVNRLTGADSHFCHSF
SSTHRLDMGFTQLSDSVLYYLGYSREEMINRSWYSLLHPEDLPLAATSHKSLMQAEEGFQ
VEMILRLQSTDLSWTWIYIRANKDPECQSISCTNYIISETEAKFLQKKISSAAFKPPSVP
NYLYFAPEVPQSRSVSAKCFKRRRMCGSQSEELGTRTRRESEEDIYCAFCPSSQGNGSPV
SLGESPALFTPPYSPASSSSTLQPEELSSDLLMDVHACEDQLPTSPDASPSYYSYQDTRL
ACHHSPADSLLTAADQVFEHRDFDLFTGSSLHSSSSSSSSPNYDFQACPADARLVPDCFF
VSERCESQGESASLHPDDFNLLDDPQGGSLVQLHQVPQQELLMHSSILTPTQSPVEAETN
LYDEREQAAISILAQQISSLASSFNLHRGLNPLQNTALAANADWLQGSPLPSAPLPKQEQ
VYDDCTLDSILKDLNVVSRTSSPSSPDVVSCSYQQGLVSGEPVSTGSFTLYPFNVQLGNQ
GRNTGLHQLNHYMQRSLQQDGLAEENLY
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggctctttggtgcgacgcctgcaaaagtcccgtcagctctccgtgcacatcccaccat
ccgcccggagaccagcgccgctccgcctgcaggaggttcaggtccaccaaaggagcctcc
aaagcccggagagaccacatcaaccatgaaattaggaatatgcgctctctgctccccatc
agccaggaggaccaggagcgcctgtcgtaccttcactccatggccgccatctgcacctac
atccgcaaatctgtcctcttccaggggctcccggctggggaacggtcccggagcgctctg
cagtacgaggccttcctggacgctctgcacggattcatcctcgtcaccacggctcaaggc
agactggtttacgtgtcggaaaatgtggctgaatacctcggtctgtccatggtagatgtt
ctacaaggagacacaatctatgacttagtggaacgatctgatgtggatgttattcgctcc
aacctcgacacggaaagcagcttattttcagagaggagcttcgtgtgttgcatgctggcc
tccaaggcctttaagctccagtttggaagctgctgctccatgctggtcagaggaaacttc
cggttcttccctcagccctcgtctgcagccgcccccaccatccagcctttgtttgtggcc
ctctgcaccccaacggtgaatcgcctgaccggcgccgactctcacttctgccacagcttc
agcagcactcacaggctggacatgggcttcactcagctctcagacagtgttttatactat
ttggggtattcaagggaggaaatgatcaaccgatcatggtacagcctcttgcatcctgaa
gatctgccactggctgcaacttctcataaaagtttaatgcaggcagaagagggcttccag
gtggagatgatcctgaggctccagagcacagatctgtcatggacctggatctatatccga
gctaacaaggacccagagtgccagagcatcagctgcactaactacatcatcagcgaaacc
gaggccaagtttttgcagaagaaaatcagcagtgccgccttcaagccgccgtctgtgcca
aattacctctactttgctccggaggtgcctcagagtcggagcgtcagcgctaaatgtttt
aaaaggcggaggatgtgtggcagccagagtgaggagcttggaaccagaacaagaagggaa
tctgaggaagacatttactgtgcgttttgcccgtcctcccagggtaacggctctcctgtt
tccctgggtgagagccccgccctgttcacccctccctacagcccggcctcatccagctcc
actctgcagccggaggagctgagctctgacctcctgatggatgttcatgcatgtgaagat
cagctgccaacctctcctgacgcctctccctcttactactcctaccaggacacgagactc
gcctgtcaccattcacctgctgactctttactcacagccgctgaccaagtctttgaacac
agagactttgacctgttcaccggcagctccctgcactcctcctcgtcctcatcttcatct
ccaaactatgatttccaggcttgtccggctgacgctcgattggttccagactgtttcttt
gtgtcagaaagatgcgagagccaaggggagagcgcgtccctgcatccggacgacttcaac
cttctggacgatccacaagggggcagtctggttcagcttcatcaggtgccccaacaagaa
cttctcatgcattccagcattctgactcccacccagtctccggtagaggcagagacgaac
ctctatgacgagagggagcaggcggccatcagcatcctggcccagcagatctcctctctt
gccagcagcttcaacctacaccgcggcctgaatcctctacaaaacacggcgctggcagcc
aacgctgactggctccaaggctcccctcttccttcagcccctctcccaaagcaggagcag
gtctatgatgactgcacgctggacagcatcctcaaagacctgaacgtggtctcgaggaca
agtagtccgtccagtcctgacgttgtttcctgcagctaccagcagggcctcgtttcaggg
gagccggtcagcacaggcagcttcaccttatatcccttcaatgtgcagctgggaaaccaa
ggcagaaacactgggttgcatcaactcaaccactacatgcagaggagcctccagcaagat
ggacttgctgaggagaacttgtactaa
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integrated database retrieval system
