Poecilia mexicana (shortfin molly): 106927497 Help Entry 106927497         CDS       T08022                                  Symbol col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism pmei  Poecilia mexicana (shortfin molly) Pathway pmei04382   Cornified envelope formation pmei04510   Focal adhesion pmei04512   ECM-receptor interaction pmei04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pmei00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     106927497 (col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     106927497 (col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     106927497 (col4a1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     106927497 (col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pmei04147]     106927497 (col4a1)    00536 Glycosaminoglycan binding proteins [BR:pmei00536]     106927497 (col4a1) Exosome [BR:pmei04147]  Exosomal proteins   Exosomal proteins of other cancer cells    106927497 (col4a1) Glycosaminoglycan binding proteins [BR:pmei00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    106927497 (col4a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  106927497 NCBI-ProteinID:  XP_014858612 LinkDB All DBs Position Unknown AA seq 1639 aa AA seqDB search MLSPLLLLLAALYCSLDLTRAEGCGASCGKCDCSGVKGAKGERGFPGLQGNMGFPGMQGH EGPPGPMGPKGDLGAPGAPGLKGVRGPPGLPGFPGNPGLPGLNGNDGPPGAPGIPGCNGT KGERGMDGLNGFPGLQGPPGLPGMEGMKGDPGGVIGIIPLKGDSGVPGSPGRPGPPGIFG PIGPPGPRGYPGFKGDTGPPGPPGEKGDRLAFVSEKGDKGERGLRGPPGPPGPSEEATGQ TTILVPGPQGEKGPKGDRGEKGFCLPHQKGIKGEQGPPGPRGKPGKDGEFGIKGEKGSSG VPGVPGLLGEKGEKGPPGYAEGPPGPPGPRGLPGLTGEKGFPGPQGEAGPPGRPGKERRG EPGMQGERGEKGDRGRDGESLSGPPGRPGPVGPPGPPGLAPDPEECNMERGDPGPPGPPG LSGEDGQKGDKGDACVRCDGTGQRGLPGPAGVKGEQGPPGAVGGKGEKGRSGPAGEPGTP GSPGSPGLMGAPGAVGEPGDIFIAPGYKGEKGFPGRPGLQGQPGREGLPGRDGLPGQPGL KGEPAKEGIKGERGPGGDPGHMGPPGERGPPGLPGFGRPGDPGEKGSQGQPGRPGAPGRH GLKGEPGQSISTPGPPGQPGPRGASGMPGLQGDRGETGSQGLPGFPGEKGEQGPPGIGFP GPAGAKGISGIPGAPGLPGEPGRPGQDGSTGKAGPPGQKGEPGRGLPGPKGAQGFQGVTG FPGDKGGRGFPGIPGSEGQTGPPGPQGVKGDVGPPGPPGLVGHPGAPGKGLPGPQGPQGP RGETGPHGREGIKGEKGYPGPPGLDMPGPQGDKGAPGFPGDPGTKGLPGLPGLPGRDGSI GYQGPKGEMGVMGIPGTPGFPGPPGQPGSPGLRGDPGVTGPRGESGKEGEKGERGEEGPP GPPGNLTQTDMEHMKGEKGDIGDPGERGSSGERGHPGVQGEQGMAGKDGEPGSPGQPGQK GDPGSPGDPGTMGPPGPKGGLGEMGIPGPVGPKGSKGDIGTPGHPGFRGTDGEKGDPGLP GEPGIGVPGFPGEKGRTGEPGFPGSRGDKGEKGHEGMPGIPGQEGPKGDKGSVGYPGQSG RPGEKGSPGLPGSAGEPGREGRPGEGGQQGPPGPRGDKGEAGQDGIPGSSGERGDPGLPG VGVPGPPGALGERGEKGDPGLPGMPGQSGAPGIKGEKGLPGSQGPQGEPGERGFPGISLE GPKGDQGATGHVGATGTPGAPGPAGVPGREGQKGEKGDAGRPGYQGESGQKGDSGSPGYP GPPGLPGINGQKGERGLPGVAGFPGTKGTLGDIGFKGEVGDRGFPGEKGNEGPPGPPGPK IFIKGDTGVPGDQGFPGPQGPPGLPGQKGEQGVIGIQGPKGETGIHGYDGQPGAKGEPGV PGPQGPRGYPGPPGPDGVQGQVGPPGPSSMDHGFLVTRHSQSVEVPLCPGGTTQIYDGYS LLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPMPMS MAPITGDSIKPFISRCVVCEAPAMVIAVHSQTIRIPPCPQGWNSLWIGYSFVMHTSAGAE GSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIETEDMFTKPVPTTLKA GSLRTHISRCQVCMKRTFT NT seq 4920 nt NT seq  +upstreamnt  +downstreamnt atgctgtcaccgctgctgctgctgctggcggctctctactgcagcttagacctgacgcgg gctgagggttgtggagcttcatgtggaaaatgtgactgcagtggagtgaagggagccaag ggtgagcgtggatttcctggccttcagggtaacatgggattcccaggaatgcaggggcac gagggccctcctggcccaatgggccccaagggagatctaggagcacctggagctccagga ctaaaaggagtgcgaggtccccctggtctgccagggtttccagggaacccaggactacca ggcctcaatggaaacgacggtccgccaggcgcacctggaatcccaggatgcaatgggacc aaaggcgaaagaggaatggacggccttaatggttttccaggacttcaagggccgcccggc ctcccaggtatggaaggaatgaaaggagatcctggtggtgtgatcgggattatccccctg aaaggagacagcggggtacctggctcacctggacgacctggaccacctggaatatttgga ccaattggacctccaggacccagaggatacccaggatttaaaggtgatactggacctccc ggccctccaggagagaaaggtgacaggttggcctttgtgagtgaaaaaggagataagggt gaacgaggactcagaggcccacctgggccccctggaccatctgaagaagcgacaggacag accacaattcttgtaccgggaccacagggggagaaaggaccgaagggtgacagaggcgag aaaggcttttgtctccctcatcagaaaggaatcaaaggtgaacaaggccctcctggacca agaggtaaacctggtaaagatggagagtttggaataaagggagaaaaaggttcctcagga gttcctggagtccctggcttgttgggcgaaaaaggagaaaaaggaccaccgggttatgct gaaggtccacctggccctcctggcccacggggtctcccagggttaacgggagaaaagggt tttcctggccctcagggagaggccggcccaccaggccgccccggcaaggaacgtcgtgga gaacctgggatgcaaggagaaaggggcgagaaaggggacagaggcagagatggagaatct ctttctggaccaccgggaagaccagggcccgtcggaccgccgggaccaccaggattagca cctgaccctgaagagtgtaatatggagagaggagaccctggtccacctggacctcctgga ttatcaggggaggatggacaaaaaggcgataaaggagacgcttgtgttagatgtgacggc accggtcaacgtggattacctggccctgcaggcgttaaaggagagcaaggaccaccaggc gcagtgggaggcaaaggagaaaagggtcgctctggtccagctggagagcctggaacacct ggttctccaggatctcctggactgatgggggctcctggtgctgtaggggaacccggagac attttcatagcacctggttacaaaggggagaaaggttttcccggacgtcctggattacag ggacaacctggcagggaaggactgccagggcgagacggactcccgggtcaaccgggcctc aaaggagaacctgccaaagaaggcattaaaggtgaacgtggcccaggcggtgaccccggc cacatggggcctcctggagaaaggggtccccctggtcttccaggatttggccggccgggt gatccaggagagaaaggcagtcagggacagccgggccgtccaggagctccaggaagacat ggtctgaaaggagagccaggtcaaagtattagcactccgggacctccagggcagcctgga ccgaggggagctagtggcatgccgggacttcaaggtgacagaggtgaaacaggttcccaa ggtctgccaggctttcctggagaaaagggggaacaaggaccgcctggaatcggctttccc ggcccagcgggtgccaaaggtatcagtggaatccctggagccccaggactccctggagag ccaggcagaccaggacaggacggctcaactggaaaagctggtccgcctggacaaaaaggt gagcctggacggggtcttccaggaccgaaaggtgcacagggcttccaaggagtcaccggt tttcctggagataagggtggcaggggattcccaggtattcccggctcagaaggacagacg ggacctccaggacctcagggagttaaaggtgacgtcggacctccgggtccacccggtctg gttggccacccgggggctccggggaaaggcttgcctggaccacaaggacctcaaggacca cgtggagaaacaggacctcacgggagagaaggtataaaaggagaaaagggctaccctggc cctccaggcctcgatatgccgggacctcagggagacaaaggagcccctggcttcccagga gaccctggtaccaaaggactaccgggtctgccgggcttacccggccgagacgggtcaatc gggtaccaaggtcccaaaggtgaaatgggggttatgggaattccaggaacgccaggattc ccaggaccgcccgggcaacctgggtcacctggtctgagaggggatcctggtgtcactgga ccgagaggagagtccgggaaagaaggagagaaaggtgaacggggagaggagggtccgcca ggtcctccaggaaacctcactcaaactgacatggagcacatgaaaggggaaaagggagac attggagacccaggtgaacgtggttcttccggagagaggggccaccctggcgttcaagga gaacagggaatggctggcaaagacggtgaacctggatcgcctggccagccaggtcagaaa ggagatcccggctctcccggagatcctggtaccatggggcctccggggccaaaaggcggc ctgggggagatgggaataccaggtccagttggtcctaaaggttccaaaggagacatcggt acaccgggtcatcctgggttcagaggcacagatggtgaaaaaggagacccgggactacct ggcgagccaggaattggtgtccctggatttccaggagagaagggcaggacaggtgagcca ggattcccaggatcccgtggagacaagggtgagaagggtcatgagggaatgcctggcata cccggccaggagggaccaaagggagacaaaggaagcgttgggtacccaggtcagtcaggc aggccgggcgagaagggcagtcctggacttcccggatctgctggagagcccggtcgtgaa ggtcgtcctggcgaaggtggccagcagggacctccgggtcctcgcggcgataagggcgag gctggacaggacggcatccctggatcctctggggaaagaggagacccaggtttaccaggt gttggtgtgcctggacctcctggagctctcggtgaaagaggtgaaaaaggtgatccgggt cttcccggcatgcctggtcaatcgggtgctcctggtattaaaggagaaaagggacttcca ggatctcagggaccacagggggagccaggagagcgaggttttcccggcatctcgctggaa ggccccaaaggagatcagggagcaacaggacacgtcggagcaacaggaacaccaggtgca ccaggacctgctggagtgccaggcagagagggccaaaagggcgagaaaggtgatgcaggt cggcctggttatcagggagagtcgggacaaaagggcgactctggatctcctggatatcct gggccacccggcctcccgggtatcaacgggcagaagggcgagcgaggattaccgggagtc gcaggcttcccaggcacaaaaggtactttgggtgacattggatttaaaggagaagtgggt gacagaggattccctggagaaaaaggtaatgaaggcccccctggtccacccggccccaag atcttcatcaaaggagacactggagtcccaggagatcagggtttccctggacctcagggg ccaccgggacttcctgggcagaaaggagagcaaggtgtgataggtattcagggtccaaaa ggtgaaaccggtatccatggatacgatggtcagccaggcgccaaaggagaacccggtgtg ccggggccacaaggacccagaggatatccaggtccaccgggaccggacggcgttcaaggt caagtgggtccgcctggcccgtcgtccatggaccacggtttcctagtaacacgccacagc caaagtgtggaggtgccactgtgccctggaggaaccactcaaatatatgacggctactcg ttgctctatgtgcaaggcaacgagcgctcccatggacaagacttaggtacggcaggcagt tgcctccgaaagttcagccccatgccgttcttgttctgcaacatcaacaacgtttgcaac ttcgcgtctcgtaacgattactcctactggctcacctcaccggagccgatgcccatgagc atggcccccatcaccggggacagcatcaaacccttcatcagcaggtgtgtcgtatgtgaa gctccggccatggtgatcgcagtccacagccagacaatcaggatcccgccttgccctcaa ggctggaactctctgtggatcggctactcctttgtcatgcacaccagcgcaggtgctgag ggttcaggtcaggctttggcctctcctggctcctgtctggaggagtttcgcagcgccccg ttcatcgaatgtcacggccgaggaacctgcaactactacgccaactcctacagcttctgg ctcgccaccatcgagacagaggacatgtttacgaaacccgttccgacaacgctcaaagca ggcagcctccgaactcacataagccgctgtcaagtgtgcatgaagaggacattcacttaa

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