Poecilia mexicana (shortfin molly): 106927739
Help
Entry
106927739 CDS
T08022
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106927739 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106927739 (nup98)
03036 Chromosome and associated proteins [BR:
pmei03036
]
106927739 (nup98)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106927739 (nup98)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106927739 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
106927739
NCBI-ProteinID:
XP_014858981
Ensembl:
ENSPMEG00000002420
UniProt:
A0A3B3Y425
LinkDB
All DBs
Position
Unknown
AA seq
1818 aa
AA seq
DB search
MFNNSFGTPFGGGTGGFGSSSAFGQQNTGFGAAGGFGTSAFGATTNTGGLFGSTQNKPGG
LFGSSTFSQPATSSTSTGFGFGAATGTSTSLFGNTGTGTSGGLFSQQSNAFGANKPTSFS
SFGTSTSSGGLFGSTNTTTNPFGASSSLFGGSGFAANQQPGTTVKFNPPTGSDTMVKAGV
TTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAPGAGGLFGGATPTSSAST
GLFGATASNSNFNFGANKSTFGPATGSFGTSTSSLFGQQNQQQASSLFKPFGGTTTTQSF
NFGNTNTMGQPNTNTMGLFGSTAASQPGGLFGTTQTSTATGFGTGSGLFGQSNAGFGTVG
TQPSLFGNKPTGFGTATTSASSFGTNTGLFGNKPALTLGTGTNTSTFGFGASPAGAGLFG
NKLATGGLGTGLGANFATVGTGTTLFGNTQNKPGMAPGTLGGFGTGGFSGGGSSLGFGAT
QQPVALTDPNANAAQQAILQQQLNVLAYSPYGDSPLFRNPLSDPKKKEERLKPTNPTAQK
ALTTPTHYKLTPRPATKVRPKALTSSGTSKSQLFDGLDDDEPSLTNGAFVPRKSIKKLVL
KNLSSSQYSSSSLNKDSDDLASPSEYPQNGHSQVEDDEVPGVSGRADDDPEVTQFYVNPI
AKPIPQGRAQPSLQDTISDLNMHKQPRNGLELSSDDVSASFGDDSLQEDREEEEEEQQQE
AKPSPHPAGIVLNRVGYYTIPPLDDLAEMLDENGECVVENFTVGRKGYGSVFFPGEVNLT
GLNLDEIVHFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPNDKTTCAQIRSPERLT
DMNYEGRLEKASRKQGARFLEYRPETGSWVFEVSHFSKYGLQDSDEDDEVPPKTDPKKLK
TMMSLPASRLQQLLPPSQQQVAPQAQSTAVDLASGVAELDSDMADITQGVLTESMLGGEE
EDRELPLVDMETAALTDHESAACSHIPSTLGINPHTLQIMKASLFTEDEEDGDMFQPHRA
TKASTDVSSPRLVLPGSQGRPSVGGLLQARFTSGIFPQRMDAPLSRGSPAAADPPRPPQW
KSPVPTPFLLPARAPEPAIRTVGVRRLGGPVPLKESVTQGKGALLMDTGLFATRSFRVGW
GPGWTLAHCGNRLSTQTADHTELQEQRTKTDFSFLHKPARTKPLAESPYKVVVEQLVGLE
ALQGTKMIEEEEEEERHAVLQRPLEISLKHSTVSVPEGASCPLVEPRPGVAALHDYAEWI
RELSAERGDADPILGHWAEVWTLCEALWGQPDPDAGPLDDYQQQLQRRRAFSDWLACGAA
RRVEEEVALAGKGRHTEALFSYLTGRRVSEACQLAQREGDHRLALLLSQASGSRVCRQLL
DLQLADWSRTQTDLHLSEERLRIFALLAGKPVWQSSGLAVNVCSELDWKRCLAVHLWYLL
PPTASVADALAAYEAAFQGSKEAGRYACMPLPPYLEGSPPLQEEEEEEPERPLLDLCFHL
LKLYSDRLYGLQPLLDPLTVTWRRLDYRLSWHLWGVLQALRYTHLAAPRQGLVHAAYAAQ
LESAGLWHLAIFILLHLPDHRQRERAVRELLALHCPLLETEESARRERFLTDRLLVPESW
IHEAKAVRAQRDGDRHRQALHLYRAGHWNQCHRLLIQHLASDCIVNDNHDYLLEFLEGLA
VPEHSASIQDWDTAGRVYLDYIRVIKSLQDIQQMDSSGAGYQLERLYSDVTSLCGRIELL
PCRTARDHLAQSEMAKRVANILRAVLSLQQGDGAADPLSIPLAQLAPHISRLPMPEDYAL
EELRGLTQSYLRQLVVSQ
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaattcgtttgggactccatttggcggtgggacgggcggcttcggctcctct
tctgccttcggccagcagaacacgggtttcggtgcagcaggaggttttgggacgtcggca
ttcggggcgaccaccaacaccggaggattgtttggctccacgcagaacaaacctggcggt
ctgtttgggtccagcaccttcagccagccggcgacttcctccaccagtaccgggttcggg
ttcggcgccgccaccgggacgtccaccagcctgtttggaaacaccgggaccggaaccagc
ggcggcctcttctcccagcagagcaatgcgttcggcgccaacaagcccacttcctttagc
agctttgggaccagcaccagtagcggcggtctgttcggctccaccaacaccaccaccaat
ccattcggcgcctccagctcgctgttcggaggctccggcttcgcagccaatcagcagcca
ggaaccacagtgaagttcaaccctccaacaggaagtgacacaatggtgaaagccggcgtg
accacgagcatcaacaccaaacatcagtgcatcaccgccatgaaggagtacgagaacaag
tctctggaggagctgaggctggaggattaccaggcgggcaggaagggccccaccaacccc
atggcgcccggcgccggcggcctgtttggcggggccacccccacctccagcgcctccacc
ggactctttggcgccaccgcctccaactccaacttcaacttcggggccaataaatccacg
tttggacccgccaccggatccttcggaaccagcaccagcagcctgtttggccagcagaac
cagcagcaggccagcagcctcttcaagccgtttggcggcactaccaccacccagagcttc
aactttggcaacaccaacaccatgggccagcccaacaccaacaccatgggtttgttcggc
agcacggcggcctctcagccgggcggattgttcggaaccacccagaccagcaccgccacc
ggatttgggaccggttctgggctgtttggccagtcgaacgctggctttggaaccgttggc
acacagcccagtctgttcgggaacaaacccaccgggttcggaaccgccaccaccagcgct
tcgtcgtttggcaccaacaccggactctttgggaacaagcccgctctgactctggggacc
ggaaccaacacctccactttcggttttggagcgagcccggctggagcaggactctttggt
aacaaattagccactggtggactgggaaccggactgggagccaactttgcgacggtcgga
acggggaccactctgtttggaaacacccagaacaagccgggcatggcgccgggaaccctg
ggaggcttcggcaccggcggcttcagcggcggcggcagcagcctgggctttggggccaca
cagcagcccgtcgcgctgactgacccgaacgccaacgccgcccagcaggccatactgcag
cagcagctcaacgtgctggcctactcgccgtacggtgactcaccgctcttcaggaaccca
ctgagcgaccccaagaagaaagaggagcgtctgaagccgaccaatccgacggcccagaag
gcgctgaccacgcccacccactacaagctgacgccgcgacccgccaccaaggtccggccc
aaagcgctcacatcgtccggcacctccaagtcgcagctctttgacggtctggacgacgac
gagccgtcgctcaccaacggagcattcgtgcccaggaagagcatcaagaagctggttctg
aagaacctgagcagcagccagtacagcagcagcagcctgaacaaagacagcgacgacctg
gcctcgccctcagagtatcctcagaacggacacagccaagtggaggacgacgaggttcca
ggtgtgagcggccgggccgacgacgaccccgaggtcacccagttctacgtgaaccccatt
gccaagcccatcccgcagggccgcgctcagcccagcctgcaggacaccatcagcgacctg
aacatgcacaaacagcccaggaacggcctggagctgagcagcgacgacgtctctgcgtcc
ttcggtgacgactctctgcaggaggacagggaggaggaggaggaggagcagcagcaggag
gccaaaccgtctcctcaccctgcaggcatcgttctgaaccgggtgggttactacaccatc
ccccctctggacgacctggccgagatgctggacgagaacggagaatgcgtcgtggaaaac
ttcaccgttggcaggaaaggttatggctctgtcttctttcccggagaggtcaacctgacg
ggcctgaacctggacgagatcgtccacttcaggcgcaaagaggtcatcgtttaccctgac
gacaagaacaagccgccggagggggaggggcttaaccggcgggctgaggtgaccctagac
ggcgtctggcccaacgataagacgacctgcgctcagatccgcagcccagagcgactcacc
gacatgaactacgagggccggctggagaaggcctccaggaagcagggcgcgcgcttcctg
gagtaccgacccgagacgggctcctgggtgttcgaggtcagccatttttccaaatacggc
ctccaggactcggacgaagacgacgaggtcccgcccaaaactgaccccaagaagctgaag
acgatgatgtcacttcctgcttccaggctgcagcagctgcttcctccatcccagcagcag
gtggcgccgcaggcccagtccaccgccgtggatttggcgagcggcgtggcggagctggac
agcgacatggccgacatcacgcagggcgtcctgacagagagcatgctgggaggagaggag
gaggaccgcgagctgccactagtcgacatggagacggcggcgctgacggaccatgagtcg
gcggcgtgcagccacatcccgtccactctgggcatcaatccgcacacgctgcagatcatg
aaggcgtctctgttcactgaggacgaggaggacggagacatgttccagcctcacagagcg
acaaaggcgtccaccgacgtctcgtcccctcggctcgtcctgccaggctctcaaggccgt
ccatctgtcgggggtcttcttcaggcccgcttcacctccggcatcttccctcagcgcatg
gacgctcctctgtcccgcggctccccagcagcagccgacccgcctcggcctccgcagtgg
aagagtccagtccccaccccgttcctgctgccggcccgggccccggagcccgccatccgg
acggtgggggtgcggcggctgggcggccccgtccctctgaaggagtctgtcactcagggg
aagggggcgctgctgatggacaccggcctgttcgccacccgctccttcagagtgggctgg
ggtcccggctggaccctggcccactgcggcaaccggctcagcacacagaccgccgaccat
acagagctccaggagcagcgcaccaagacggacttcagcttcctgcacaaaccggcccgg
accaaaccgctcgctgagagcccctacaaggtggtggtggagcagctggtggggctggaa
gctcttcagggaacgaagatgattgaggaagaggaggaggaggagcggcatgccgtgctg
cagcgccccctggagatcagcctgaagcacagcaccgtcagcgtccctgagggcgcgtcc
tgtccactggtggagccacggcctggtgtggcggcgctgcatgactacgccgagtggatc
agggagctgagcgcagagcgcggcgatgcagaccccatcctgggccactgggccgaggtc
tggacgctgtgtgaggccctgtggggccagccggacccggacgccggcccactcgacgac
taccagcagcagctgcagcgccgccgcgccttctccgactggctggcctgcggcgccgcc
cgcagggtggaggaggaagtggcactggcggggaagggccgccacacggaggcgctgttc
agctacttgacgggccgccgcgtcagcgaggcgtgtcaacttgcccagagggaaggtgac
caccgcctggccctgctgctgtcgcaggcctctggatcaagggtctgccgtcagctgttg
gacctgcagctggccgactggagccggacgcagactgacctccacctgagcgaggagcgg
ctgcggatcttcgccctgctggccgggaagccggtgtggcagtcgtccgggttggcagtg
aatgtctgctcagagctagactggaagcgctgcctggccgtccacctgtggtacctgctg
ccacccaccgcctccgtggccgacgccctggccgcctacgaagccgctttccagggctcc
aaagaggctggcaggtatgcctgcatgccgctgccgccgtacctggaggggtcaccaccc
ctacaggaggaggaggaggaggagcctgagcggccgctgctcgacctctgcttccacctg
ctgaagctctacagcgacagactgtacggcctgcagccgctgctcgacccgctcaccgtc
acctggcggcgcctggactaccggctcagctggcacctgtggggcgtgctgcaggcgctg
cgctacacccacctggccgcaccgcggcagggcctcgtccacgccgcctacgctgcccag
ctggagagcgctggcctctggcacctggccatcttcatcctgctgcacctccccgaccac
aggcagcgggagcgtgccgtcagggagctgctggcgctgcactgccccctgctggagacg
gaggagtcggcccgcagggagcgcttcctgactgacaggctcctggttccggagagctgg
atccacgaggccaaggcggtccgggcccagcgggacggggaccgccaccgccaggccctg
cacctgtaccgggccggacactggaaccagtgccaccggctgctgatccaacacctggcc
tcagactgcatcgtcaacgacaaccatgactacctgctggagttcctggagggcctggcg
gtaccagaacacagcgccagcatccaggactgggacacggctggcagagtctacctggac
tacatccgggtcatcaagtccctgcaggacatccagcagatggacagctccggcgccggc
taccagctggagcggctctactctgacgtgacgtcgctctgcggccgcattgagctgctg
ccctgccggaccgccagggaccacctcgcccaatcagagatggcgaagcgcgtggcgaac
atcctgcgggccgtcctgagtctgcagcagggcgacggcgccgcagacccgctcagcatc
ccgctggcccagttggcgccgcacatcagccgactgcccatgccggaggattacgctctg
gaggagctgcgcggcctgacccagtcctacctgcggcagctcgtcgtcagccagtga
DBGET
integrated database retrieval system
