Poecilia mexicana (shortfin molly): 106927886
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Entry
106927886 CDS
T08022
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
106927886 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmei03400
]
106927886 (xrcc5)
DNA repair and recombination proteins [BR:
pmei03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
106927886 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
DUF4599
Motif
Other DBs
NCBI-GeneID:
106927886
NCBI-ProteinID:
XP_014859247
Ensembl:
ENSPMEG00000018201
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MAGSKSALVLCMDVGFSMSNSAPGEEPPFAQAKKVIQKFVQRQVFAETKDELALVLFGTD
STKNPLDQDGQYQNITVHRHLMVPDFELLEEIEHQIHPENQQADWLDALVVSMDLLQTET
QGKKCDRFNIVLLTDLSTEASSDKLDVIIENLKRAGITLQFFLPFPVEDEEEGGGDGDGT
GSGDPGRGKGLSREQRSGLEMVKNIMLSLDEEEGLEEIYTFRNAVEQLCMFKRIERRPMA
WPCQLTIGSSLSIRIVGFKAVTEEKLKKMWITVDAQTNKRDDVKRETVYCLDDDNETEVQ
KDDIIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFTKRNLVLRHQFMGTQVVKIFP
ARDDEHAGVAMSALIRGLDELNMVAIVRYAYDRRSNPQVGAAFPCIKPEYECLLYVQLPF
MEDLYGRQFTFPSLENNKKIAPSETQLSAIDSLIDSMMLVTEDEDLLKPHHLPNPAFQRH
FQCLHHRAVHPDSPLPPMEPWLEAALDRPEVIQERCQAPLEEIKKLFPLTEVEKKKKLKT
SAQIFGKDSEEPDAKKAKEDEAEDEYSLASIAEGSVTSVGSVDPARDFRALIKQKTLPFG
EVCQQLTHRIEQLLSNKNTHYYMKSITCIQAFREQSVKQGNADLFNSYLQSLKRSIPSRA
LEVFWDLLVQDAVTLISKDEVEGSAVSKSEASQFLLAEEKKEQAAPEPVEDTGDVDDLVS
MKMCPPTSIYVLAFYRDDLGIRLVLELFPLRFSCCSLRS
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggccggatcaaaatcagccctggttctctgcatggatgtgggcttctccatgtccaac
tcagccccgggtgaagagcctccatttgcacaggcgaaaaaagtcatccagaagttcgtc
cagcgccaggtttttgcagagaccaaggatgaactggctttggttctgtttggcacggat
tctaccaaaaaccctttggaccaggatgggcaataccagaacatcacggtgcatcgtcat
cttatggtgccggactttgagctgctggaggagattgaacatcagatccaccctgagaat
cagcaggctgactggctggatgctcttgtagtttccatggatcttctccagacagaaacc
caggggaaaaagtgtgatcgcttcaacattgttctcctgactgacctgagcactgaagcc
agttcagacaagctggatgttattattgagaacttgaaacgagctggaatcaccctgcag
ttttttttgcctttcccagtggaggatgaagaagagggtggaggagatggggacggaacg
ggttccggtgaccctggtaggggaaaaggtctctccagggaacagcgaagtggcctggaa
atggttaaaaacatcatgctgagtctggacgaggaagagggcctggaagaaatttacaca
ttcaggaatgctgtggagcagctgtgtatgtttaaacgcattgaaaggagacccatggcc
tggccctgtcagctcaccattggtagctctctgtccatccgtatcgttggcttcaaagcc
gtgactgaggagaaactgaagaaaatgtggatcacagtcgatgctcaaaccaacaagaga
gatgatgtgaagagagagactgtttactgtctggacgacgacaatgagacagaggtgcag
aaggacgacattattcagggttttcgttacggaagtgacatcgtacctttctccaaagtg
gatcaggatcagatgaaatacaagcatgatgggaagtgctttgctgttctgggcttcact
aaaaggaacttggttcttcgccatcagttcatgggaacacaagtggtcaagatatttcct
gcacgggatgatgagcacgcaggcgtggccatgtcggctctgatccgtggtctggatgag
ctcaacatggttgccatcgtgcgttacgcctacgaccggcgcagcaatcctcaagtgggc
gctgcattcccgtgtatcaagcctgaatatgagtgcctgttatatgttcagctgcccttc
atggaagatctttatggaagacagtttacgtttccttctcttgagaacaacaagaagatc
gctccatcagaaacgcagctgtcagccatcgactctctcatcgattcgatgatgcttgta
acagaagacgaagatttgctcaaacctcaccatcttcccaaccctgccttccagagacac
ttccagtgtctgcaccacagggctgtacaccccgactctcctcttcctcccatggagccg
tggctggaggctgctctcgatcgccctgaggtcatccaggaacgctgccaagctccactg
gaggagataaagaagttgtttccactcaccgaagtagagaagaaaaagaagctgaagaca
agcgctcagatttttggcaaagactctgaggagccagatgccaagaaagcaaaagaagac
gaagcagaggatgagtatagcctggcaagcattgctgaaggatctgttacttctgtggga
agcgtcgatccagctcgggacttccgcgctctgatcaaacagaaaactcttccattcgga
gaagtctgtcagcagctgactcacaggatagagcagctgcttagcaacaagaacacgcac
tactacatgaaaagcatcacctgtatccaggctttcagagagcagtctgttaagcagggg
aatgctgatctgttcaacagttaccttcagtccctgaaaaggagtattcccagcagagcc
ctcgaggtcttctgggacctgcttgttcaagacgctgtgactttgatcagcaaggacgag
gtcgaaggaagcgccgtgtcgaaaagtgaagcctctcagtttctgttggctgaggaaaag
aaagaacaagctgcccctgaaccggtggaagacactggcgatgttgatgacttggtgagt
atgaaaatgtgtcctccaacatcaatctatgttctcgctttttatagagatgatttagga
attaggttagtgttagaactgtttcctctgcggttttcatgttgttctttgaggagttga
DBGET
integrated database retrieval system
