Poecilia mexicana (shortfin molly): 106928012
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Entry
106928012 CDS
T08022
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04140
Autophagy - animal
pmei04148
Efferocytosis
pmei05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106928012 (vps16)
04148 Efferocytosis
106928012 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106928012 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106928012 (vps16)
Membrane trafficking [BR:
pmei04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106928012 (vps16)
Hops complex
106928012 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
106928012
NCBI-ProteinID:
XP_014859472
Ensembl:
ENSPMEG00000011410
UniProt:
A0A3B3YIJ1
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MAFITANWNPLGDAFYRKTELYEMFWSLRDGLRDSLIAAAPYGGPIALLREPLRRSPSTR
PQLEIYSASGVSITSFPWKSGPVVYLGWSVNDELLCVQEDGTVLIYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIEDLKLRRLPEVPGLQGRPSCWAVL
TQDRQTKVLVSSGPELYVLDNTSCTAVYPPGLSPQAGSIVHMSVSFSYKYLALFTETGRL
WTGLSNLQERLSEVDTKQAATPRQMVWCRRPRSQQPSVVLMWDRLLLVVGSCNDTIQFPL
EDQSVLVGELDGVRIISSSSQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQNVLGDAVRQCVEAAAHEYDPDTQKALMRAASFGKCFLTEFSPDQFVMTCR
ELRVLNAVRESSVGMPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEVCRYLKIPDYQGVSR
VLKHWASCKVQQKDLTDEAIARAVCAKVGDSPGVSYSDIAAKAYECGRPELAIKLLDFEA
RSGQQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEPQTLKDLYNQDDDHQELGNFYVTSSYRDKRLEGRLAQLQSAVDEYNKAKND
FAAKATEEEMRLLRFQRKLDDEKGAGLLGLSLQATMEALMSLGLHKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEQWEELEKFSKSKKSPIGYLAFVEVCMKNNNRHEAKKYVSKVTPEQK
VKAHLAVGDLEGAADAAIERKNEAEMGAVLSRCSASDRLLMDKLNRARVTAAKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggccttcatcaccgctaactggaacccgctgggagacgccttctaccggaagacggaa
ctctatgagatgttctggagcctccgggacggactgagggacagtctgattgcagcagct
ccgtatggaggcccaatcgctctgctcagagagccgctcagacgttcccccagcactcgt
cctcagctggagatctactccgcctccggagtgtccatcaccagcttcccttggaagagc
ggtccggtggtctacctggggtggtccgtcaacgacgagctgctgtgtgttcaggaggac
gggacggttctgatctatgacctgtttgggtccttcaagagacacttcagcatgggacag
gaagtggtccagagtcaggtgttggaggccaaggtgttccactcgccgtatggaacaggc
gtcgccatagtaacgggttcctcccgcttcaccttggcaaccaacatcgaggacctgaag
ctgcgcaggctacctgaggtcccaggtctccagggcaggccgtcctgctgggccgtcctc
actcaggacagacagaccaaagtcctggtgtccagtggacctgagctctacgtcctggac
aacacgtcctgcacggctgtgtatcctccaggtctcagtcctcaggctggcagcatcgtc
cacatgtctgtctccttcagctacaaatatctggctctgttcaccgagacggggcgcctg
tggaccggcttgtccaacctacaggagagactgagtgaggtggacaccaagcaggcagcg
acgcccagacagatggtctggtgccgcaggccgaggtcccagcagccctcggtggtgttg
atgtgggaccggctcctcctggtggtgggatcttgtaacgacaccatccagttccccctg
gaggaccagtcggtgctggtgggcgaactggacggggttcggatcatcagctccagcagc
caggagctgctgcaggaggttcctctggtctgccaggacatcttcaagatcgcctccatg
gcccctggagcgttgctgcttgaggcccaccgggagtacgagaagtccagtcagaaggcg
gacgagtacctgagggagatcaaggagcagaacgtcctgggagacgccgtccggcagtgt
gtggaggcggccgctcacgagtatgaccctgacacccagaaggccctgatgagggcggcg
tcctttgggaagtgcttcctgacggagttcagcccggatcagtttgtgatgacctgcagg
gagctgcgggttctgaacgccgtcagagagagcagcgtggggatgccgctcacacacact
caatttaaacagatgacccttcaggtcctgatagacaggctggtctaccggcagttctac
cctctggccatcgaggtctgtcgctacctgaagatcccagactaccagggagtcagtcga
gtcctgaagcactgggcgtcctgcaaggtgcagcagaaggacttgaccgatgaggccata
gcccgagcagtctgcgccaaggtgggagactcacctggagtttcgtactcggacatcgca
gctaaagcgtatgaatgtggacggccggagctcgccatcaagctgctggatttcgaggcc
cggtccggacagcaggttcctctgctgctgaagatgaagaggagccagctagctctcagt
aaagccgtggagagcggcgacaccgacctggtttacacggtggtgacgtacctgaagaac
gagatgaacagaggagatttcttcatgactctgaggaaccagccggtggcgctcagcctc
tacagacagttctgcaaactgcaggagcctcagacgctgaaggacctgtacaaccaggac
gacgaccaccaggagctgggcaacttctacgtgacgtccagctacagggacaagaggctc
gagggtcggctggcgcagctgcagagcgccgtggacgagtacaacaaggccaagaacgac
tttgctgccaaggccacggaggaggaaatgcgcctccttcgattccaaaggaagctggat
gacgagaagggggcgggacttctgggactctccctgcaggccaccatggaggctctgatg
tcattgggtctccacaagcaagcagagcagctctacagagacttcagagtgccggacaaa
aggtactggtggctgaagctgaagtctctggctgagaaggagcagtgggaggagctagag
aagttctccaagagcaagaagtctcctattggctacctggccttcgtggaggtgtgcatg
aagaacaacaacaggcatgaagccaagaagtacgtcagcaaggtcacacctgagcagaag
gtcaaagctcacctggccgtgggcgacctggagggggcagcggacgctgccattgagcga
aagaatgaagctgagatgggggcggtcctctccagatgctccgcctccgaccggctgctg
atggacaagctgaacagggcccgggtcaccgccgccaagaagtga
DBGET
integrated database retrieval system
