Poecilia mexicana (shortfin molly): 106928448
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Entry
106928448 CDS
T08022
Symbol
lamb1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04510
Focal adhesion
pmei04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106928448 (lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106928448 (lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
F5_F8_type_C
Laminin_II
Motif
Other DBs
NCBI-GeneID:
106928448
NCBI-ProteinID:
XP_014860209
Ensembl:
ENSPMEG00000020654
UniProt:
A0A3B3XRV3
LinkDB
All DBs
Position
Unknown
AA seq
1934 aa
AA seq
DB search
MKLIRESVNVLILNSSFIFFDKNVLPTSDQLPFDGSRAQSGFFFFIPLQVLPFKSERCSG
SGRLYVRSTNSVRVVLIWAGRKWGWVALGRRSSAEAAGGLVGGGFWEPHRILRRSAGVSQ
VLVPVSGGFHRRFWLWIMLHLRLAVLLALQVLTCAQDGGDSLGGAPDDLSLPEFSDVCTE
GSCYPATGDLLIGRAHQLLSTSTCGLKRPEPFCIVSHLQEEKKCFVCDSAAPYDDELANH
NHSHRIENVVTTFGPNRLKTWWQSENGMENVTVQLNLEAEFHFTHLIMTFKTFRPAAMVI
ERSADYGKTWQVYRYFAYDCESSFPSVSHGPMKKVDDVICDSRYSDIEPSTEGEVIYRVL
DPAFRIEDPYSPRIQNLLKITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGN
CFCYGHASECAPVEGAGQTMEGMVHGHCMCNHNTKGLNCEQCEDFYHDLPWRPAEGRNTN
ACKKCNCNQHSDSCHFDTAVFMASGNVSGGVCEDCRHNTTGHNCEQCKPFYYQHPEKDLR
DPNICQPCNCDPVGSLNGGICDGLTDVRVGLIAGQCRCKVNVEGERCEHCKPAYYGLSDE
PEGCKACTCSPLGTAPGGNPCDSETGSCFCKRLVIGRDCDQCVDEHWGLSNDMDGCRPCD
CDLGGAVHNRCDQVSGQCVCRDHMFGRRCDQVESGFYFVALDHYTYEAEDAKFGPGVTMV
PRPHPHDRSPTWTGVGLVNVPEGAFLDFSVDNIPHSMEYDILIRYEPQLPDQWEEVLMMV
MRPGPITADSRCVNTVPDDDNQMISLHPSSRYVVLPRAVCFESGLNYTIRLSLPLYSALS
EIHSPYTLIDSIVLMPHCKNLEIFTSSVGGDVSAWETFQRYRCLENSQSVIKTPMTDICR
NFIFSISALLHQGAKECQCDPQGSLSTVCDPSGGQCQCRPNVAGRNCDRCAPATFQFGPS
GCKECACDPQGSQSPICDQLSGQCVCVAGAYGRQCDRCLPGHWGFPTCRPCSCNGHTESC
DAATGRCTACRDHTTGHSCDRCLDGYYGDPVLGSGDHCRPCLCPDGPNSLRQFAGSCYRS
DTSEQVVCVCSPGFKGARCDQCSPGYYGNPEEAGGQCLPCQCNSNIDMLDPESCDARSGE
CLRCLYHSEGPSCQNCKLGYYGNALVQDCRKCVCNQLGSDESSCQSSTDCHCDRSSGQCH
CRPNVIGQRCDRCAPDTWNMASGAGCQSCDCNPEHSYGTTCNEISGQCSCHPGFGGRTCN
ECRELFWGDPEVQCHACDCDPRGTSESQCNKVSGHCVCVEGVAGPRCDDCARGFHGTFPD
CHRCHQCFSEWDSVIGQLTNQTHRLVNKVSSIKASGISGPYRKPIESMERSAADIQSILD
QDPASQPLTEVQNLLQQASDLMAALSQTMNNTEETLDLVAQQDSGIKTQLDSVTSDAQKL
ERTVQELLDQVEFIKNSDIRGATDSVTKYFLQSQAAEARANASTINTGSPVESSAALRQL
TEDKMNQTREEFLERQSEHAQKLDNLAGEMETLDLSVISYKTCGSPSSGQDSCWSSPCGG
LGCVDPEGQPKCGGEGCDGAVTAANSILMKTQEAEQEIISAMAEVEQLSKMVLEVKMQAD
EAKLSAQNVLMKTNRTKHKVDQSNEELRSLIKQIKDFLTQDAADLESIELVANEVLAMQM
PTTPAQLQNLTDEIRHKVGELGHVEAILQQSADDIQRAETLLDQARQASKQATDTKDSAE
KVKQALEEAQRAHTAASSAIQQAASDIRTTTKLLSSVETETADAESKLYNATQRLQRLEQ
DVKLLADKSANVTERTKLANQEAADIGRIAEEVKKELESEVKQKYSTVEQLIDQKAVGVA
DAKKRAESLQNQAKQLLLQASDKLQLLKDLEKSYDDNQQTLELKAEQLVEMEAAVKKLLQ
EISHKVTLYSTCSF
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgatccgggaatctgtgaacgttctcattttgaactcttcatttattttcttt
gacaaaaatgttctgccgacttcagatcagctgccgtttgatggctccagagctcagtcc
ggattttttttctttattcctcttcaagttttaccttttaaatctgagcgctgttctggt
tctggacggctttacgttcgttctaccaattctgttcgagtggttttaatctgggccggc
cggaagtgggggtgggtggctctcgggaggcggagctccgcggaggctgccgggggtctg
gtggggggggggttctgggagccccacaggatcctcagaaggtctgctggggtctcacaa
gttctggtcccggtgtctggaggttttcatcggcggttctggttgtggatcatgttgcat
ctgcggctcgcggtgctgctcgctctgcaggtcctcacctgcgctcaggacggcggagac
tcactgggcggggccccagatgacctcagcctcccagagtttagcgatgtttgcactgaa
ggcagctgctacccagcgacaggggatcttctgattggccgagctcaccagctgctgtcc
acctctacctgcggactgaagcgtccagaaccgttctgcatcgtcagccacttgcaggag
gagaagaagtgctttgtgtgtgactcagcagcaccatatgacgatgagctggccaatcac
aatcacagccaccgaattgaaaatgtcgtcaccacatttggccccaacaggctgaagacc
tggtggcagtccgagaacggtatggagaacgtcactgtccagctgaaccttgaagccgag
tttcacttcactcacctcattatgaccttcaagacgtttcgaccagctgccatggtcatt
gagcgatcagcagactacggaaagacctggcaggtttaccgctactttgcctacgattgc
gagtcgtcctttccatcagtttcccatggtccaatgaagaaggttgatgatgtcatctgt
gactctcgttactcggacatcgagccatccactgaaggcgaggtgatttacagagtcctg
gacccagcatttcgtattgaagatccttacagtccacggatccagaacttgttgaagatc
accaacctgcgggttaagttcaccaagctgcacacactcggagacaacctgctggactct
cggatggaaatcaaggagaagtattactacgccatctatgacatggtggtcagaggaaac
tgcttctgttacggacatgcgtctgaatgcgcccctgtcgagggagcaggccagaccatg
gagggcatggttcatggtcactgtatgtgcaatcacaacactaaaggactgaactgtgaa
cagtgcgaagacttttaccacgatctgccctggagaccagctgaggggcgcaacaccaat
gcctgcaaaaagtgtaactgtaaccagcactcggattcgtgccacttcgacacggccgtg
ttcatggcctctggaaacgtcagcggaggagtttgcgaagactgtcggcacaacacgacc
ggacacaactgtgagcagtgcaaaccgttctattatcaacatccggagaaggacctcaga
gacccaaacatctgccagccctgtaactgcgaccctgtgggctccctgaacggaggaata
tgcgacggattgacggatgtccgagtcggtctgatcgccggtcaatgccggtgcaaagtc
aatgtggagggggaacgttgcgaacactgcaaaccggcgtactacgggctcagcgacgaa
ccggaaggctgtaaagcgtgtacctgcagtcccctgggaacggctccgggaggaaacccg
tgcgacagcgaaacaggaagctgtttctgcaaacgtctggtgatcgggcgggactgcgac
cagtgtgtggatgaacactggggactcagtaacgacatggacggctgcagaccctgcgac
tgcgacctgggaggggccgtccacaaccggtgcgatcaggtgagcggtcagtgtgtctgc
agggatcacatgttcggccgtcgctgcgatcaggtggagtccgggttctactttgttgct
ctggatcactacacctatgaggctgaagacgccaagtttggacctggagtgacaatggtg
ccaagaccccaccctcatgaccgcagtcccacctggacaggcgtcggcctggtcaacgtc
cctgaaggggccttcctggatttctctgtggacaacatccctcattccatggagtacgac
attcttatccgctacgagcctcagctgcccgaccaatgggaggaggttctgatgatggta
atgaggcctggaccaattacagctgacagccgctgcgtcaacacagtgccagacgacgac
aaccaaatgatctcccttcatcccagctcgcggtacgtggttctgccgagggcggtttgt
tttgaatctgggctgaactacacgatccgcctcagtctgccgctctactcggccctcagc
gaaatccactctccgtacacgctcatcgactcgatcgtgttgatgccgcactgtaagaac
ctggagatattcacctcctctgtgggaggggacgtgagtgcctgggaaacgtttcagcgt
tatcgatgtctggagaacagccagagtgtcattaaaaccccgatgactgacatctgcagg
aacttcattttcagcatctctgccctgttgcaccagggagctaaagaatgccagtgtgac
ccccagggctccctcagcacagtgtgtgaccccagcgggggccagtgtcagtgtcgaccc
aacgtggcgggcaggaactgcgacagatgcgctccggccacgtttcagtttggaccgagc
ggctgcaaagagtgtgcctgcgaccctcaggggtcccagagtccgatctgcgatcagctg
agcggtcagtgcgtctgtgtcgccggcgcctacggtcggcagtgcgaccgctgcctgccg
ggtcactggggcttcccgacctgccgaccttgctcctgcaatggacacacggagagctgc
gacgccgccaccggccgctgcaccgcctgcagggatcacaccaccggacacagctgcgac
aggtgtctggatggttactacggcgacccggtactgggctcaggcgaccactgtcgcccg
tgtttgtgtcccgacggcccaaacagtttgcggcagttcgcgggaagttgttaccgtagc
gacacctcggagcaggttgtgtgtgtttgcagcccaggattcaaaggtgctcgctgtgat
cagtgctcacctggttactatggaaacccggaagaggcaggtggccagtgtctcccgtgc
cagtgcaacagcaacatcgacatgctggacccggagtcctgtgacgccagatccggcgag
tgtctgcgctgtctgtaccacagcgagggtccgtcctgccagaactgcaaactgggttac
tacggcaacgccttggttcaggactgcaggaagtgtgtctgtaatcagctgggcagcgac
gagtccagctgccagtcctccaccgactgccactgcgaccgcagcagcggccagtgccat
tgcagacccaacgtgattggtcaacgctgtgaccgctgtgcacccgacacctggaacatg
gcgagcggcgccggctgtcagagctgcgactgcaaccccgagcattcgtacgggacgacc
tgcaacgagatcagcggtcagtgctcctgccatcctggctttggaggaagaacttgcaac
gagtgccgagagctgttctggggagacccagaagtccagtgtcatgcgtgcgactgcgac
cctcgcggcacctcggagtcgcagtgcaacaaagtgagcggccattgcgtttgtgtggag
ggcgtggccgggcctcgctgcgacgactgcgcccgtggcttccacgggaccttcccagac
tgccatcggtgccaccagtgtttctcagagtgggacagcgtcatcggtcagctgaccaat
cagacacaccgactggtcaacaaagtcagctccattaaagccagtggaatcagcggaccg
tacaggaagcctatagagagcatggagagaagtgctgcagacatccagagcatcttagac
caagatccggcctcgcagcctctgaccgaggtccaaaacctgctgcaacaggccagcgac
ctgatggcagctttgagccagacaatgaacaacaccgaggagactctggatctggtggct
cagcaggactctggcattaaaacccagctggactctgtgacgtcggatgctcagaaactg
gagcgaacggtccaggagctgctggaccaagtggagttcatcaagaactccgacatcaga
ggggcaacagacagcgtcaccaagtacttcctgcaatctcaagcggccgaggcgcgagca
aatgcctcaaccatcaacaccggcagcccagttgaatcttctgctgccctacggcaactc
acagaagacaaaatgaaccaaaccagggaggagtttctggagagacagtctgagcatgct
cagaagctggacaacctggcaggagagatggagactttggacctatcagtgatcagctat
aagacctgtggcagtccatcatctggccaagactcctgctggtcttcgccctgcggaggt
ctgggctgtgtagatcctgaaggtcagcccaagtgtggaggagaaggatgtgacggtgca
gtgacggcagccaacagcatcctgatgaagactcaagaggccgagcaggaaatcatcagc
gccatggcagaggtggagcagctctccaagatggtgttggaggtgaaaatgcaggctgat
gaggcaaagctcagcgcccagaatgtcctgatgaagaccaacagaaccaaacacaaggtg
gaccagagcaacgaggagctgcgaagcttgatcaaacagatcaaagatttcctcacacag
gatgctgcagacctggagagcatcgaactggtggcaaatgaagtcctggccatgcagatg
ccgaccacaccggctcagctgcagaacctaacggacgagatccgacacaaagtgggagag
ctgggacacgtggaggcaatcttacagcagagcgccgatgacattcagagagcagagact
ctgctggaccaggcccgccaagccagtaagcaggcgacggatacgaaggactctgcagag
aaagtgaaacaagctctggaagaagcccagagagctcacacagctgccagcagcgccatc
cagcaggccgcctccgacatccggaccaccaccaagctgctctcctccgtagagacggag
acggcagatgcagagtcaaagctgtacaacgccacccagaggctgcagaggctcgagcag
gatgtgaagctgctcgccgataaatccgcaaacgttactgagagaaccaagctggccaat
caggaagccgcagacatcggaaggatcgcagaggaggtcaaaaaggagttggagtcggag
gtgaagcaaaagtatagcacagtggaacagctgatagatcagaaagcagtgggcgtggcc
gacgctaagaagagggcggagtcgctgcaaaaccaggccaaacagctgctgctacaagcc
agcgacaaattgcagctgctgaaagatctggaaaagtcgtacgacgacaaccagcaaact
cttgagttgaaagctgaacagctggttgagatggaggcagcagtgaagaagctgctgcag
gaaatcagccataaggtcacgctctacagcacctgctcattttag
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integrated database retrieval system