Poecilia mexicana (shortfin molly): 106928449
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Entry
106928449 CDS
T08022
Name
(RefSeq) laminin subunit beta-4-like
KO
K06245
laminin, beta 4
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04510
Focal adhesion
pmei04512
ECM-receptor interaction
pmei04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106928449
04518 Integrin signaling
106928449
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106928449
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
LAMB4
LAMININ_IV_B
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
106928449
NCBI-ProteinID:
XP_014860210
Ensembl:
ENSPMEG00000020687
UniProt:
A0A3B3XS17
LinkDB
All DBs
Position
Unknown
AA seq
1783 aa
AA seq
DB search
MILIFVLVCLPAVKPQDLQDQCPGGSCHPQLGDLMVGRGTQLSASSTCGVDGPQNYCIVG
YLEGEKKCFTCDSRLPFSPQSNPQSHRIENVVTTFDSDRRLKWWQSENGVHQVSIQLDLE
TVFQFSHLVLTFKSFRPAAMLVERSKDFGRSWKVFRYFADDCSLHFPSVPAEPASFIDDV
VCDSRYSGPEPSTGGEVVLKALDPVFEIDDPYAPNIQELITLTNIRVNFTRLFTLGDTLL
ARRRRNPQEKYYYSLYSMVVQGSCFCNGHASRCVPVDGGRGDVFTQPGMVHGRCVCEHST
AGENCERCQPFHNDSPWKPGGQTTPNICRRCNCHGHSDSCHFDAARYEETGGASGGVCDD
CRHDRTGPQCERCRPLMYQDPQRALEDPHACIPCDCDPAGSHSGGLCDASSGRCFCKENV
EGQRCDRCKHGFFDLRSDNPAGCEVCRCHGLGSVGPCDPLTGSCRCESMATGPLCDHCVA
GFWGLGNSVFKCSPCDCDVGGASSNMCSPEDGQCSCLPNMVGRRCSDPAPGYFLPSLIYF
LYEAELAAQLTGGTSSPSPPGPLPAFPSSSPLVNPGLLPPCEQYFRRQGYHFQLSNGKVI
LIRRPRHLARRRRRQNTSPPNQGPLQILPHQGSPEQSGTGLGLVRVTEGAGLRFTVDNLP
TSMEYQLVIRYESESDSDWVARVNVITLSPGDGGCSDDPPTGSLTLILPRSSRLGILDSR
VCLNARGRYSVEIFFDRQQRSDNAPLLVDSMGLVQSFYSVQEDFCSQSDFDSFSHSRCVG
LDVYLGSQESLPKICEGLIKSLSARIHNGAVACRCNVIGSLGSRCSMLGGSCECKPSVIG
RCCDTCAPLTFGFGPEGCKRCECDSQGSLSEACDLSGGQCACRPRVSGRRCDRCESGFWG
FPLCQPCECNGLSETCDGRTGECVDCREHSSGPHCDRCVEGYYGNPVSRQPCQPCLCPDI
LSSGRFFASSCRYNPQSVSVSCSCREGHAGERCDRCSPGFYGDLRLPGAACRACSCNNNI
DPDDSDACDGTTGECLRCLHYTTGPQCQFCKPGYYGNALQHNCKECSCDRRGTKATLCPL
ESPCFCDRRTGQCPCRTGVVGDLCDECEDGFWNLDGTSGCQPCSCDPANSVSNVCDKVSG
QCPCRPEFGGRQCDKCGENHFGDPNLQCFSCDCNLEGTQRPSCDPETGECICRTGVSGIL
CDACAPGYSSEFPACEKCHECMVLWTENITDVQRAAQRMRTFIPLHGNTQHPTHSQYWQR
MLEMHSRLDSVGNMTGFSLPKMEKVEKLYMKIRKLKDAVDTNIILIDPSVLLNNEINNIN
VEFQKMLKNLKDKLTKDPNKKETQPVEEMLQEIQKLHKTFMSDEKRVRNSIKAVEDSMDT
RQETKRKLSMCSGRADLATLEKKVKELNVRQLNQKICGRPDPDDCSGCPEGQICDGAVPD
AQKASEMAEKVKEQLIKFPSNLDESKKKISDVQQVAQDVKDQAQDLQRQLSATTESLERE
KNQTRELLQRVKQYLMDEMVPPGDIEKMANAVLRIQLPRSPAEIQSMINEISNLLNGATK
FQEDLKKLQDEAKTAQELLQKATEAKEQTTNIDVKDILRDIIAADAAQSKANDDLEVANK
DRDNAKDRIQEAGNKLNRIEDKLMNQPVGLLEEIEALKNKTEKNREMAKEARETAESALT
NVSNDTELQEVEEQFELLKQKHLNKTLEDEAADRLQEILKEAEDMQRQMEDRLQQIEDLE
QKIQLLIQRKEEKIVEVVELLQTVESLQKEIASKAEYYTTCSS
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcatctttgttcttgtttgtctcccggcggtaaaaccccaggacctccaggac
cagtgccctggcggctcctgtcacccccagctcggtgacctgatggtgggacggggaacg
cagctctcagcttcatccacctgcggcgtggacggaccccagaactactgcatcgttgga
taccttgagggggagaaaaagtgtttcacgtgtgactcccgactgccgtttagtccccaa
agcaacccacagagccatcgtatcgagaacgtcgtcacaacgtttgactccgacagacga
ctgaagtggtggcagtctgagaacggagttcatcaagtcagcatccagttggacctggag
actgtcttccagttcagccacctggtcctcaccttcaagagcttcaggcctgcagccatg
ctggtggagcgttcgaaggattttggacggagctggaaagtttttcgctactttgcagac
gattgttcccttcattttccttcagttcctgctgaacctgccagcttcattgacgacgtt
gtctgtgacagcagatactctggaccagaaccgtccacaggtggagaggtggtgctaaaa
gctctggatcctgtctttgaaatagatgacccatatgctccgaacattcaagagctcatc
accttgacgaatatccgcgtgaacttcacccgtctcttcacgctcggtgacacgctgctg
gctcgcagacgcagaaatcctcaggagaaatattactactcactttacagcatggtggtt
cagggaagctgcttctgtaacggacacgccagccgctgtgtccctgtggacggaggacgt
ggagatgtcttcacccagcccggcatggttcacggtcgatgtgtctgtgagcacagcaca
gctggggagaactgtgagagatgtcagccgttccacaatgactccccctggaagcctgga
ggacaaactacacccaacatctgcaggaggtgtaactgtcacggtcactcagactcgtgt
cactttgatgctgctcgctacgaagagaccggaggtgcaagtggcggcgtgtgtgacgac
tgccgccatgacaggacggggcctcagtgcgagcgctgtcgacctttaatgtatcaggac
ccgcagagggcgctggaggacccccacgcctgcataccgtgtgactgcgaccccgccggc
tcccacagcggcggcttgtgtgatgcttcaagcggtcggtgtttctgtaaggaaaacgtg
gagggtcaacgctgcgatcgctgcaaacatggcttcttcgatttgagatcggacaacccg
gctgggtgtgaagtctgcaggtgccatggtttgggaagtgttggaccatgtgatccgctt
acagggagctgtagatgtgagtcaatggccaccgggccgctgtgtgatcattgtgtggca
ggtttctggggtttgggaaactctgtgttcaaatgttcaccctgtgactgtgatgttggc
ggagccagcagcaacatgtgttctccagaggacggacagtgttcctgtttacccaacatg
gtgggccggcgctgctctgatcctgcacctggttacttcctgccttcgctcatctacttc
ctgtatgaggcggagctcgctgcacagctgacaggaggaacttcctccccttctcctcct
ggtcctctccctgcctttccctcttcctctccactggtgaatcccggccttttgcctcca
tgtgagcagtatttcagaagacagggctatcacttccagctctccaatggaaaagtgatt
ttgatccggaggcctcgtcatctcgcccgtcggaggagacggcagaacaccagccctccg
aaccaggggcccctgcagatccttccccaccagggttcacctgagcagtcaggaactggt
ctgggattggtcagagtgacagagggggcggggcttagattcaccgtggacaacctgcca
acatcgatggagtaccagctggtgatccgctatgaatctgagtctgactccgattgggtg
gcgagagtgaacgtcatcacgctgtcaccgggcgacggaggctgcagtgacgaccctcca
acaggaagtctgacactgatcctccccagaagctccagattaggtattctggattcccgg
gtgtgtctgaacgccagaggtcgatactccgtggagattttctttgacaggcagcagaga
tcagacaacgctcctctgctggtcgactcgatgggactggttcagagtttctattcagtc
caagaagacttctgttcccagagtgacttcgactctttcagtcactctcgctgcgtcgga
ttggacgtgtatctcggttctcaggagtcacttccaaaaatctgcgaaggactgatcaag
agtctgtcagcgcgcatccacaacggagctgtggcctgcaggtgtaacgtcatcggttct
cttggatcgaggtgcagtatgctgggcgggtcatgtgaatgtaagcccagcgtgatcgga
cgttgctgtgacacttgcgcacctctgacctttgggtttggacctgaaggctgtaaacga
tgcgagtgcgactctcaaggctctctgtcggaggcgtgcgatctgagcggaggtcagtgt
gcgtgtcgcccccgggtatcgggtcgacgctgcgatcgatgcgagtctggattctggggg
ttcccgctgtgtcagccctgtgagtgcaacggcctgtcggaaacctgcgatgggcggacc
ggagagtgtgtggactgcagggagcacagcagtgggccgcattgtgacaggtgtgtggag
ggttactacggtaacccggtctccaggcaaccctgtcagccctgcctgtgccctgatatc
ctgagcagcggacggttctttgcctcttcctgtcgatacaatccgcagtccgtcagtgtg
agctgctcctgcagggaggggcacgcaggtgaacgatgtgaccggtgcagtccgggtttc
tatggcgacctgaggttgccaggtgccgcctgcagagcgtgctcctgcaacaacaacatc
gacccggacgacagcgacgcctgcgacggcacaaccggagagtgtctccgctgccttcac
tacacgacaggtccgcagtgccagttctgcaagcctggttactatggcaacgccctgcaa
cacaactgtaaagaatgctcctgtgaccgccgggggaccaaggcgactctatgtccccta
gagagcccctgcttctgcgacaggaggacaggacagtgcccctgcaggacgggggtggtg
ggagatctctgtgatgaatgcgaggacgggttctggaacctggacggaacgtcggggtgt
cagccctgcagctgcgacccggctaactccgtctccaacgtctgtgacaaggtgtcggga
cagtgtccctgtcgtcctgagtttggaggaagacagtgtgacaaatgtggagaaaaccat
tttggggatccaaacctgcagtgcttctcttgtgactgtaaccttgagggaacgcagcgc
ccgtcgtgtgaccctgaaaccggtgagtgcatctgtcggactggtgtcagcgggatcctc
tgtgacgcgtgcgctccaggctacagctcagagtttcctgcctgcgagaaatgccacgaa
tgcatggttctgtggaccgaaaacatcactgacgtccagcgagctgcccaaaggatgagg
accttcatccctctccacggcaacacccagcatcccactcacagtcagtactggcagcgg
atgctggagatgcactccaggctggacagcgtaggtaacatgactggtttctctctgcca
aagatggagaaggtagagaaactctacatgaagattaggaagctgaaagatgctgttgac
accaacataattctgatcgacccatctgtcctccttaacaatgaaatcaataatattaac
gtggagtttcagaagatgctgaaaaacctgaaggataaactcaccaaggatccaaacaag
aaagaaactcagccagtggaagagatgctgcaggagatccagaagcttcacaaaaccttc
atgtcagacgaaaagcgggtgagaaactccattaaagctgtggaggactccatggacacc
agacaggagactaagcgcaaactgagcatgtgcagcggcagagcagacctggcaactctg
gagaagaaggtcaaggagcttaacgtgcgccaactcaaccaaaagatctgcggccgaccg
gatccggatgactgctctggatgtcctgaaggtcagatctgtgatggagctgttcccgac
gcccagaaagcctctgagatggccgagaaagtaaaagagcaactcatcaaattcccatcc
aacctggacgagtcgaagaaaaagatcagtgatgtccagcaagtggctcaggacgtcaaa
gaccaggcccaagacctgcagcgccagctcagcgccaccaccgaatcactggagagagag
aaaaaccaaaccagagagctgctccagagagtcaaacagtatctgatggatgaaatggtt
cctccaggtgacattgagaaaatggccaacgctgtcctgaggatccagctgccgcgatca
cctgctgagatccaatcgatgatcaatgagatcagtaatcttttgaacggtgccaccaaa
ttccaggaggacctgaagaagctgcaggatgaagccaaaacagctcaggagcttctgcag
aaagcgacagaagccaaggagcaaactacaaacatcgacgttaaagacatcctcagggac
attattgctgcagacgcagctcagagcaaagccaacgacgacctggaggttgcaaataag
gacagagacaacgccaaagaccggatccaagaggcgggaaacaaactgaaccgcatcgag
gataagctgatgaaccagcctgtaggtctgctggaggagattgaagctctgaaaaataaa
acggagaagaacagagagatggccaaagaggccagagaaactgctgagtcagcgttgacc
aacgtttctaatgacacggagctgcaagaagttgaggagcagtttgagctcttaaagcag
aaacacttgaataaaacacttgaagacgaagccgcagatcgactgcaggaaatcctgaag
gaggccgaagacatgcagagacaaatggaggacagactccaacagatagaagacttggag
cagaagatccagctgctgatccagaggaaggaggagaaaatagtggaggtggtcgagctg
ctgcagacagtggagtcacttcaaaaggaaatcgcctctaaagctgaatattacaccaca
tgttcctcataa
DBGET
integrated database retrieval system