Poecilia mexicana (shortfin molly): 106928566
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Entry
106928566 CDS
T08022
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106928566
03036 Chromosome and associated proteins [BR:
pmei03036
]
106928566
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmei03037
]
106928566
Enzymes [BR:
pmei01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106928566
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106928566
UBL E3 ligases
106928566
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
106928566
Cilium and associated proteins [BR:
pmei03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106928566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
TMEM171
Motif
Other DBs
NCBI-GeneID:
106928566
NCBI-ProteinID:
XP_014860385
Ensembl:
ENSPMEG00000017138
UniProt:
A0A3B3YT38
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MPLPARRRRKKGPDEEERATGFSAEVMAPTRMKLRRRDTVAAAAPAGGAPLEADADRTRE
SRRSSRRKNTTKTSAPAAPASSPPSTSSGAARPAMAAEASPDSKCPICLDRFNNLAYLDH
CLHRFCFPCIQEWSHNKAECPLCKQPFASILHSVRAEDDFKEYTLQPPPRATNQLTASTF
LTTVAAMTADGAQHHLRLMLRRHLVAADRDAVRRRRRRERAASGRRATDRVGEWEFFMHS
PPLPVSPYHLDMSELIMDNMRVEEVAEEMMRRDEERRQVLSEELAGLRGAAAPSTRASRR
LMCRLAVRQRLQREGGTVQMREREVTAFRKALYQSGIRVRGISGNQGRPRSVTAETFRRG
TSHLTRLNGWLRRELAVLLGPHAPLSDVVLRTITARVLRSGLEDAAAVEEDLRPFLLART
EHFVHELVSFARSSLSMESYDQLAVYEPPAAAMELEPLSSPSDGSSVIAISEEEEEEGGG
RAEAAAGRHDDVIQTGSSLSLSGWDDETPGPSYTSAEPPHSLTTPPPLSPAPQQPANQEG
AEPRGEEEECLIVGYKKPIAERTPELVQLSSDSEEDEGEKKKEEEEVEVGSTTVDKTPPP
PAPYLPIIPPSTSGAFRAEQQKEANSRRRSGSWSESSGRSRKSVCSLSPATPDRRRRDRK
QQGDRRRKKKKQRGRDQSREPHGKSGTFCNPNRSIFPPMMSRCSPSPFDSSADSASSPPP
SPPDSGWELRFSQVSPLTSSVSSPSRSFSPLCSSPGTPPSPPCSPKRPHHVEKPGGKRKY
KSRHLNSSKDSSWRPSRGRQRDRERKKRLRREAERRDSSLKTGSRRSRDDRSPSVEIIYE
GTIDSGAAQPSAHKRHRRRHRRAQVTSSPVIITLDSDSSHDNGQKKTNSGSSSPLSSQQT
IDFSDLPSLPLAPSAGVGGAVEVGELPADILDRGSDGSESEAAVRSRAARRGDRSDHSYV
DIENMEDAVSLLETSDDQQPAAKRPGHREDPSDRYLLEAILDDLNRIAPPRQNLSQDGGF
LSENRERTPQEVIRLEERTDSGPTSPTACQQNPDSVPPPLERMEGREVPPLLRRASPVGS
YHRNTPPPLKHKDAGSPPHSAASPPNVGPRRSSDPNPTSRNSPGLNPLAIPPIPTIQNQL
SMSPSASGATLHSASPRLPARSGSDRLPSLRFGSFPSIESFHSSESLKLNLPLTPATSSH
SPDLHPAHRRNPVSPTRRVGAGGLGPSGWDFFSGLNSHGAAAFRPDRPPAGGVRPVGAAA
AGGQEVGVPPLSGSASNHKALAPPPSQHALCFIQSERSSQSESRSELIRLPESDSASQNR
NNPSSAALPGSQDQNQEQNPHTEPLGTQRHDPAHHNHDPTHHTHDPAHHTHDPAHHTHDP
AHHTHDPIRLPVSPHNFSFDSAHRQSSSRLSGPAHFLSGPAHLPSGSAHQSSHRNFEPLS
DNQLLGRPSDRLSGEIPP
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgccgctaccggcgcggagaagaaggaagaaaggcccggatgaggaggagcgagctacg
ggtttttcagctgaggtgatggcgccgactcggatgaagctgcgtcggcgggacacggtg
gctgcggccgctccagcaggaggcgctccgctggaagcagacgcagacagaaccagagag
agccggcggagcagcaggaggaagaacaccaccaagacctctgccccagccgcccctgcc
tcatctcctccttccacctcatctggcgccgcgcgacctgccatggcggctgaggcgtca
cccgactccaagtgtcccatctgcctggaccgcttcaacaacctggcgtacctggaccac
tgcctgcaccgcttctgcttcccctgcatccaggagtggtcgcacaataaggcggagtgt
ccgctctgcaagcagcccttcgcctccatcttgcactcggtgcgcgctgaggacgacttc
aaggagtacacgctgcagccgccgccacgcgccaccaaccagctcaccgctagcaccttc
ctcaccactgtggctgccatgacggcggacggcgcgcagcatcaccttcggctgatgctg
aggcggcacctggtggcggccgacagggacgccgtgcggcgccggcgccggcgtgagcgg
gcggcgagcggccgcagggcgacagaccgcgtcggggagtgggagttcttcatgcactct
ccgccgctgcccgtctcgccgtaccacctggacatgtctgagctcatcatggacaacatg
cgggtggaggaggtcgccgaggagatgatgaggagagacgaagagcggcggcaggtgctc
agcgaggagctggcgggcttgcggggcgcagcggcacccagcacccgcgcatcacgccgc
ctcatgtgtcgcctggcggtccggcagcggctgcagagggagggcggcaccgtccagatg
agggagagggaggtcacggcgttccgcaaggcgctctaccagagcgggatccgagtgcgg
ggcatcagcggtaaccagggaagacctcgcagcgtcaccgcggaaacgtttcgccggggg
accagccacctgacccggctgaacggctggctgaggcgggagctggcggtgctgctcggc
ccgcacgccccgctcagtgacgtggtgctgcgcaccatcaccgcccgcgtcctgcgcagc
ggcctggaggacgccgccgccgtagaagaagacctgcggccgttcctattggcccgcacc
gagcactttgtgcacgagctggtgagcttcgcccggtcctcgctcagcatggagagctac
gaccagctggcggtgtacgagccgcccgccgccgccatggagctggagccgctcagcagt
ccctccgacggcagctccgtcatcgccatctccgaggaggaggaagaggagggaggagga
agagccgaggcggcggcaggacgtcacgatgatgtaattcaaacaggaagcagcctcagc
ctgtccggctgggacgatgagacgccaggaccgtcgtacacctcggcagagccgccgcat
tcgctcaccacgccgccgccgctcagcccggcacctcagcagccggccaatcaggaggga
gcagagccgcgcggcgaggaggaggagtgcctgatcgtcggatacaagaagccgatcgct
gagcgaactccagagctggtgcagctgtcctccgacagcgaggaagacgagggagagaag
aagaaggaggaggaggaagtggaagttggctcaactacagtcgataagactccgccccct
cctgctccttacctacccataatccctccttccacatcaggagccttcagggcggagcag
cagaaggaggcgaactcccggcgacggtccggttcctggtcggagagttctggacggagc
aggaagtcggtctgctccctcagcccagcaacgccggatcgccgccgcagggacaggaag
cagcaaggcgaccgccggaggaagaagaagaagcagcgtgggcgggaccagagcagagag
cctcatgggaagagcggcaccttctgcaaccccaaccgctccatcttcccccccatgatg
tcccgctgctcgccgtcgccattcgactccagcgctgactccgcctcctcgccgccgccg
agcccgccggactccggctgggagctccgcttcagccaggtgtcccccctcacctcctcc
gtctcctcgccctcccgctccttctccccgctctgctcctcccccggaacgccgccctcc
cccccctgctcccccaagcgcccgcatcacgtggagaaacccggcgggaagaggaagtac
aagagccggcacctgaacagcagcaaggactcgtcatggaggccgagccgcggccggcag
cgcgacagggagcgcaagaagaggctccgcagggaggcggagaggcgggacagcagcctg
aagacaggaagcaggaggtccagagacgaccgcagtcccagcgtggagatcatctacgag
ggaaccatcgactccggcgccgcgcagccgtccgctcacaagcgccaccgcagacgccac
cgcagggcgcaggtcaccagctctccggtcatcatcaccctggacagcgacagtagccat
gacaacggccagaagaagaccaacagcggcagcagcagccccctcagcagccagcagacc
atcgacttctccgacctcccgtccctcccattggctccctccgccggagtgggcggggcc
gtggaggtcggggagcttcccgccgacattctggaccgtgggtccgacgggtcggagtcg
gaggcggcggttcggtccagagcggcgcgccgaggcgaccgcagcgaccacagctacgtg
gacatcgagaacatggaggacgccgtctccctgctggagacgtctgacgaccagcaaccg
gcggccaagagaccgggccacagagaggacccgtccgaccggtacctgctggaggccatc
ctggacgacctgaaccggatcgctccaccacgacagaacctgtcccaggacggcggcttc
ctgtcggagaacagagagcggacgccgcaggaagtcatccggctggaggagaggaccgat
tctggtccaacgtctcctaccgcctgtcagcagaacccggactccgtcccgcctcctctg
gagaggatggagggtcgggaagtcccgcctctcctccggcgggccagtccggtcgggtcg
taccacaggaacacgccgccgcccctcaaacacaaggatgctgggagtccgccgcacagc
gccgccagcccgccaaatgttgggccgcgccggtcctctgacccgaatccgaccagcagg
aactcaccgggtctcaacccactcgccattcctcccataccaaccatccagaaccagctc
agcatgtcgccgtctgccagcggcgccacgctccactccgcctcccccaggctcccggcc
cggtctggttctgatcggctccccagcctgaggttcggttcttttccctccatcgagtcg
ttccatagcagcgaaagcttgaagctgaatttacctttgacccctgcgacttcctcacat
tccccagacctccacccggctcaccgcaggaacccggtcagcccgacccggcgggtcggt
gccggtggtctcggtccatctggctgggacttcttctcaggtctgaactctcacggcgct
gctgctttccgaccggaccggccgccagcagggggcgtccgtcctgtcggcgccgccgct
gcaggaggtcaggaggtcggcgtcccgccgctctctggctccgcctccaaccacaaggcc
ttagccccgcctccttcacaacacgccctctgcttcatccaatcagagcgcagttctcag
tctgagtcccgttctgaactgattcgcctccccgagtccgactcggcatcacagaaccgg
aacaatccgagctccgctgccctgccgggctcacaggaccagaaccaagagcagaatccg
cacactgaaccacttggcacgcaaaggcatgaccccgcccaccacaaccatgaccccacc
caccacacacatgaccccgcccaccacacacatgaccccgcccaccacacacatgacccc
gcccaccacacacatgaccccatccgactcccagtctcccctcacaatttttcctttgac
tccgcccacagacaatcttccagccgactctctggccccgcccacttcctctctggcccc
gcccacctcccctctggctccgcccatcaatcctcccacaggaactttgaacctctgtca
gacaatcagctgttgggtcggccgtctgatcggctctctggagaaattcctccctga
DBGET
integrated database retrieval system
