Poecilia mexicana (shortfin molly): 106928870
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Entry
106928870 CDS
T08022
Name
(RefSeq) putative RNA exonuclease NEF-sp isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106928870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmei03009
]
106928870
Ribosome biogenesis [BR:
pmei03009
]
Eukaryotic type
Pre-60S particles
RNases
106928870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-GeneID:
106928870
NCBI-ProteinID:
XP_014860911
Ensembl:
ENSPMEG00000007726
UniProt:
A0A3B3YCF4
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MECSSSSNVLSGKKKRQNEAPSAQEDVKRRKTEEEGDKDLRRRPCGSAKVSVRLDRLRQP
ITVAQLMELLHFAALGKSRGIKQPSWCRLHHQKKVSRINVAIVDGVTQSLFYNHYLSMEH
LRSTYATRISFTSSSDDVDDVASDIFSLEVPKVDFLCLSAAEEALHEALKYHPVITAFGT
QRRGLTAYLLSQQQMIKNHYPVKGLPGFEDFLCTGSDVRVTDDSPLYGLDCEMCQTMKGN
ELARVSLVDGDGNCLLDELVKPQNHVIDYLTRFSGITAAMLRPVTTTLRDVQAKIRTLLP
DDAVLVGHSLNNDLKALKLIHPHVIDTALLYRKEHGQKFKLKVLAQAVLKRQIQTEDQRG
HNPTEDAVAALDLAQYFIRTGPLQVVELHLEELWGWSLEESPDCKPEPTPSYRFADILQS
LSRPVAFLGKRAFVDLDLSHQRWYRSDKEMLSSFRNQTSHLFLSVLRFSSLSDHMKRSYA
HRYHQQQLHHNVSAVFRDMCTVFSGPFPVHFSKREVKRLFSCCGPVHKVQMRNTGVRIHA
KVEFQMLEGAMLALEVLNGFSVSGQTIKVQRPVKESMLDLDLNLDALMSDKVNTNQLYVS
RLSQDVAEGLNISATVNGRLLDGKPSGFYPGRQTNGSLQTAKVNGKHLHPGTIAPDLSEE
SLREAFSPFGSIKSVTLPGMHARHARIEFESSDGKHAALSSSDHLLKTGYLTWPSMTPPH
LHSWVGMATSRKMQDVEEDAADEQRPDSFTYSGIQRNQEASLLNKLDRRLSRVFNSLPDG
TLSVVLLLRHNSRGFDHPGLCFLEVKDGF
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggagtgctcctcatcttcaaacgtcctgagcggcaaaaagaaaagacaaaatgaagcc
ccatctgctcaggaggacgtcaaaagaaggaagactgaggaggaaggcgacaaagacctc
cggcgacggccttgcggttcagcgaaggtgtcggtgcgcctggaccgcttgcggcagccg
atcaccgtggctcagctgatggagctgcttcattttgctgctctggggaaatccaggggt
atcaaacaaccgagttggtgtcgtctccaccatcagaagaaggtcagccgtataaatgtc
gcgatcgtggacggtgtgacgcagagtctcttctacaaccactacctttcgatggagcac
ctccggagcacctatgccaccagaatttccttcacttcatcatctgatgatgttgatgat
gtggcatctgacatcttcagccttgaagttcctaaggtggactttttatgtctttctgca
gcagaggaggcgcttcatgaagctctgaagtatcacccagttatcactgcgtttggcaca
cagaggaggggactgactgcatatctgcttagccaacaacagatgataaagaatcactat
ccagtcaagggacttccaggttttgaggactttctgtgcacaggcagcgatgtccgtgta
accgatgacagcccgctgtatggactagactgtgaaatgtgtcagacaatgaaaggaaac
gagttggctcgtgtttctctggtggacggtgatggtaactgcttactggatgagctggtg
aaacctcaaaaccatgtcatcgattacttaacgaggttctcaggcatcactgcagccatg
ttgagaccggtcaccaccacgctgcgggacgttcaggctaagatcaggacactgttacca
gatgatgccgttctggtgggccactccctcaacaatgacctcaaagcactcaaactcatc
catcctcacgtgatcgacaccgccctgctgtacaggaaagaacacggacagaagtttaag
ctgaaggttctggcccaggcggtgcttaagaggcagatccaaaccgaggaccagaggggt
cacaatcccaccgaggacgccgtggcagcgctggatctggcccagtacttcatcagaacg
gggccgctccaggttgtggagcttcacctggaggagctgtgggggtggagcttagaggag
tctcctgactgcaaacctgaacccacaccaagttacaggtttgcagacattttgcagagc
ctcagccgccccgtagcatttctgggaaagcgcgccttcgttgacctggacctgtcccat
cagcgctggtacagatctgacaaagagatgctgtcatccttcaggaaccagacgagtcac
ttgttcctgtccgtccttcgcttttcgtccctctctgaccatatgaaaagaagctacgct
caccgttatcaccagcagcagctgcatcacaatgtttctgcagtcttccgggacatgtgc
accgtattttccgggccgttcccagtccacttttccaaaagagaagtgaagcggctgttt
agttgctgtgggccggtccacaaagtccagatgaggaacacaggagtcaggatccacgcc
aaggtggagtttcagatgctggaaggagcaatgctcgctttagaagttctgaatgggttc
agcgtgtcgggtcagaccatcaaggtgcagaggcctgtcaaagaatcaatgctggacttg
gacctgaatctggacgctctaatgagcgacaaagtcaacaccaatcagctttatgtcagc
agactgagtcaggacgtggctgagggactgaacatttctgctacagttaacggccgtctg
ttggatggaaaaccatcaggtttctatcccggcagacaaacgaacggatcattacagacg
gctaaagtcaacggtaaacatctgcatcccggcaccatcgcaccggacctgagcgaggag
agcctcagagaggcattcagtccctttgggtcaataaaaagtgtcacgctgcccggtatg
catgcaaggcatgcacgcattgagtttgagagttctgatggcaaacacgcggcactcagc
tcctcagatcatctgctgaaaaccgggtatctaacctggccgtctatgactccaccacac
ttacattcatgggttggcatggcgacatcaaggaagatgcaagacgtagaggaggatgct
gcggacgagcaaagacctgactcatttacctacagtgggattcagaggaatcaggaagcg
agtctcctgaataagctggaccgccgactgagtagagtcttcaactcgctcccagacggc
accttgtctgtggtgctgctgctcagacacaacagcagaggttttgatcatcctggatta
tgttttttggaagtcaaagatggattttaa
DBGET
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