Poecilia mexicana (shortfin molly): 106928918
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Entry
106928918 CDS
T08022
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04120
Ubiquitin mediated proteolysis
pmei04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106928918 (syvn1)
04120 Ubiquitin mediated proteolysis
106928918 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106928918 (syvn1)
Enzymes [BR:
pmei01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106928918 (syvn1)
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106928918 (syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
zf-RING_Vps41
FAR1_N
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
106928918
NCBI-ProteinID:
XP_014861000
Ensembl:
ENSPMEG00000005414
UniProt:
A0A3B3WNL1
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MVRAILVTATSMALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHLRVLSLLGLLAVMDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYVLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQAQAPPPAPAPAPAAPANAP
AAPAPNVAPGMLPGFPPGVFPFWGPFPAVPPPAAAAPPAAPAAADAPPGSTDTTQAAGTS
QPPSAAADAATSSAAAAAPGSAIPGFPFSFPPPPFPAAPWLPMPPPPPFVSSMPPPPPSL
SRLTEEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLAPPRPEGGTA
EAGGANQEAASAGAESPTTERDSSTSDPVGGATVSSQPADSTSSASDAERKENWDEGAAD
DENGEPSAAELRRRRLRKLETTPSSPTSPSPPPDN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcaatcctggtgaccgccaccagcatggcgctgaccggtgccgtggtggcc
cacgcctacctgctcaaacatcagttctacccaacagtcgtgtacctcaccaaaagcagc
cccagcatggcggttttgtacatccaggcgtttgtgctggtgttcctgctggggaaattc
atgagaaaggtgttctttggccagctgagggctgctgaaatggagcacctcatcgagcgc
tcctggtacgcggtgacggagacctgcctggcgttcaccgtgttcagggacgatttctcc
cctcgcttcgtcgccctcttcaccctcctgctcttcctcaagtgtttccactggctggcc
gaggaccgggtggactttatggagaggagtccgaacatatcctgggtttttcacttgaga
gttttatctcttctaggacttctggctgtcatggacttcctgtttgttaaccatgcctgc
cacagcatcatcaccagaggagcttcggtccagctcgtttttggttttgagtacgccatc
ttgttgaccatggtcctgacgaccttcatcaagtacgtcctgcacaccgtcgaccttcag
agtgagaacccctgggacaacaaggccgtctacatgctctacaccgagctcttcacaggt
ttcatcaaggttctcctctacatcgccttcatgaccatcatgataaaggtccacaccttc
cccctgttcgccatccggcccatgtacctggccatgaggcagtttaaaaaagccgtaaca
gatgctataatgtcaaggagagcaatccgcaacatgaacactctatatcctgatgcgact
ccggaggatctgcaggcctcggacaacgtctgcatcatctgtagagaggaaatggtcact
ggagccaagaagctaccctgtaatcacattttccactccagctgcctgcgctcctggttc
cagaggcagcagacctgccccacctgccgcatggacgtcctcagggcgtccaacaacaac
caggcgcaggccccgcccccggctccggccccagccccagcggcacccgccaacgcaccg
gcagccccggccccaaacgtcgctcccggcatgctgccaggcttccctccaggagttttc
cctttctggggtcctttccctgcagttcctccacctgctgctgctgctccacctgcagct
cctgctgcagctgatgctccaccaggcagcacggacacgacgcaggctgctggcaccagc
cagcccccttctgctgctgcagatgctgctacatcgtcagccgctgccgccgctccagga
tcagcaatcccaggattccctttctccttcccgccacctcccttccccgctgcgccatgg
ctgccgatgcctccgcctcctcccttcgtgtcgtccatgcctcctccgcctccgtcgctc
tctcggctgacggaggaggaactgagggagctggaggccgaagggaggaggggcctggag
gccaggctgcagtgtctccagaacatccacaccctgctggacgccgccatgctcaacatc
caccactacctcagcaccgtcgccacgctcgcccctccgcggcctgagggtggcaccgca
gaagccggcggagccaatcaggaggcagcgtccgctggcgcagagagtcccaccacggag
agggactcgtccacctctgacccagtaggtggagccacagtctcctctcagcccgctgac
tccacctcctctgcctcagacgcagagaggaaggagaactgggatgaaggagcggcggac
gacgagaacggagagcccagcgcagccgagctgaggcgccgccgcctccgtaagctagag
acgacgccttcgtcgccgacatcgccgtcgccacctcccgataactga
DBGET
integrated database retrieval system
