Poecilia mexicana (shortfin molly): 106929088
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Entry
106929088 CDS
T08022
Symbol
cnot4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106929088 (cnot4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmei03000
]
106929088 (cnot4)
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106929088 (cnot4)
04121 Ubiquitin system [BR:
pmei04121
]
106929088 (cnot4)
Enzymes [BR:
pmei01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106929088 (cnot4)
Transcription factors [BR:
pmei03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
106929088 (cnot4)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106929088 (cnot4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106929088 (cnot4)
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106929088 (cnot4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
Med7
DZR_2
Rtf2
RDD1
zf-CCCH_2
zf-C3HC4
Torus
Motif
Other DBs
NCBI-GeneID:
106929088
NCBI-ProteinID:
XP_014861244
Ensembl:
ENSPMEG00000006852
UniProt:
A0A3B3WRM4
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MSHSPEMKDDPMECPLCMEPLEIDDVNFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEEIQRIKNEKKQKQNEKKQKVTENRKHLASVRVVQRNLVFVVGLSQRL
ADPEVLKRPEYFGRFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKSMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQDLYKINPGFLQPPACGTEKSKSKPNSTQRTNNSNGKDSWPTLSGHNKLANGLSEDRKS
PPLLDYLDQEASNSDGLESELGPGQRPTLSPFSSNCDSNSPNDKPPESIGMVNGEALQQM
PTSDSPSPPPGLTKPILVVPISMSDLSARSPFEGAAAESQSLFSDNSNFRHPNPLPAGLP
PFPSSSRGSSDWPMTPEPQILFTSDTIPVSSSTDWQAAFGFGSSSKQQDDDLGFDPFDVT
RKALADLIEKELSVQDQSPSSPGPLAPGSGHSPGLPPSNLSTSHHFPGGLPRVHPLHHRA
FYSSFSFPGGHNSQAGQQQQQQQLPTTRHPWMGIPTRNNLAHLNHSASAASHSNILDLNL
PPQHNTGLGGIPISENSSSIDGLNVKEWQDGLRALLPNININFGGLPNSSSSSSSSSSNS
VNHIGGPVGPAGISHSLSWDSTASWMDPAIITGIPASAGSSLDCLQDDNPPHWLKSLQAL
TEMDGPASSAVPAPPQPLHSGLLDGHLPLHHRAPSGWAPYLPPPTANPTGQFHSPPPGFQ
TAFRPPGQPATELLQSAAVDRH
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacagccctgaaatgaaggacgaccccatggagtgccctctgtgcatggagcca
ctggagattgatgacgtcaatttcttcccctgcacttgtggctaccagatctgccgcttc
tgttggcaccgcatccgcacagacgagaacggcctctgccccgcctgcagaaagccgtac
ccagaggaccccgccgtgtacaagcctctgtcacaggaggaaatccaaaggataaagaat
gaaaagaagcagaaacagaacgagaaaaagcagaaggtgacagaaaatcgcaagcatctg
gcgagcgtcagagtggtccagaggaacctggtgtttgtggtggggctgtcgcagcggctc
gctgatcctgaagtcctaaaacgaccagagtattttgggcgatttgggaaaatccataaa
gtggtcatcaacaacagcacatcgtacgcaggttcacaggggcccagtgccagcgcttat
gtcacttacatccgttccgaagacgctttaagagcaatacagtgtgtgaacaatgtggtc
gtcgacgggagaacactcaaggcttctttaggcacaacaaaatactgcagttacttcctc
aaaagtatgcaatgtcccaaacctgattgtatgtatctacatgagttgggggatgaagca
gctagctttactaaagaggagatgcaggcggggaaacatcaagagtacgagcagaaactc
ctccaagacctctacaaaataaatcctggttttctacaacctccagcttgtggaacagaa
aagtcgaagagtaaacccaactccacacagagaactaacaatagcaacggtaaagacagc
tggccgacgctgtcggggcacaacaaactggccaacggactttcagaagaccgcaagtcc
cctccgctgttagactatctagaccaggaagctagtaattcagatgggctagaatcagag
ctgggtccgggccagcgtcccaccctatcccccttctcctccaactgtgacagtaatagt
cccaatgacaaacctccagaatcaatcggtatggtcaatggagaagctttacaacagatg
cccacaagtgactccccttcccctcccccgggtctaacgaaacccatcctggtggtgccc
atcagcatgtcggacctctcggcccgttcgccctttgagggcgctgcggcagagtcccag
tcgcttttttcagacaacagtaacttcagacatccaaaccctctccccgctggcctgccc
cctttccccagctcctcccgcggcagttccgactggcccatgacaccagaaccacagata
ctcttcacatcagacacaataccagtgtcttcctcaacagactggcaagcggccttcggt
ttcggctcctccagcaaacagcaggacgacgacctgggcttcgaccccttcgacgtcacc
cgcaaggctctggccgacctgatagagaaggagctatcggttcaggatcagagcccctcg
tctcccgggccgctcgcgccggggagcggccacagtccaggcctgccgccgtccaatctc
agcacatcccaccacttccccggcggcctgccccgcgtccacccgctccaccacagagcc
ttctacagctccttcagtttccccggcggccacaacagccaggccggtcagcagcagcag
cagcagcagctccccaccaccagacacccctggatgggcatccccacacgaaacaacctc
gcacacttgaaccactcagccagtgctgcctcacacagtaacatcctggacctgaatctg
ccccctcagcacaacacggggctgggagggatccccatctcagaaaacagcagctctata
gacggcttaaatgtgaaagagtggcaggacggactgagagctctcctgcccaacatcaat
atcaacttcggtggcctccccaactcctcctcctcttcatcttcctcgtcctccaacagt
gttaaccacatcggcgggccagtggggccggcaggcatttcacacagcctcagctgggac
agcacggccagctggatggatcctgctatcatcacaggcatccccgcctcggccggcagc
agtttagactgtctccaagacgacaacccgccacactggctcaagtccctgcaggcgcta
acagagatggacggtccagccagctccgcggtgcccgcccccccacagcccctccacagc
ggccttctcgacggccacctccccctccaccacagagcccccagcggctgggctccctac
ctgccccctcccacagccaaccccaccggtcagttccactcccctccaccaggcttccag
accgccttcagacccccaggacagcccgccacagagctactacagagtgccgctgtggat
cgccactga
DBGET
integrated database retrieval system
