Poecilia mexicana (shortfin molly): 106929207
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Entry
106929207 CDS
T08022
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmei03036
]
106929207 (hfm1)
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106929207 (hfm1)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Meiosis-specific proteins
Others
106929207 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
106929207
NCBI-ProteinID:
XP_014861420
LinkDB
All DBs
Position
Unknown
AA seq
1517 aa
AA seq
DB search
MFDADDCTVSLDSLFFEKPTVHKVKPLPLEGSQWQLDAPPPLTHIPATQDMQQEAESLSA
LYSFTQKPKKFQPPFKGLNASSSKINSFYSFNDEERRFEETQGDCTSNLRGNNGCSGDDG
LKDYPDGSFMSGGGGDETRLDSCHVAISRCLHGLPLRRSLFRSPTLSDAGDLSTNVDLKS
RSGNGGGGGEKTSRPQTFLSPVAMATVPPALQLPQAAVGKAAPPFSCSSAVSVRPLQQAP
HAETLDKGAKRAFVPPMTPQPLHIQGSSGSEVLRPVSEIPVKFRSIFSEFPFFNYVQSKA
LDDVLYTNKNFVACAPTGSGKTVLFELAIIRLLMETQEPWRDVKAVYMAPIKALCSQCYD
SWSKKFGPLGLTCKELTGDTEIDDLFEIHDSHIILTTPEKWDSMTRKWKDNSLLQLVRLF
LIDEVHVVKDATRGATLEVVVSRMKAVNSYRTSQNPEGGITMRLVAVSATIPNICDIADW
LSNGSEPASYLSMDESHRPVKLRKVVLGFPCSGTQTEFKFDLSLNYKMANIIQTYSDQKP
TLVFCSTRKGAQQSAAVLAKDARFIMSFEHKQRLMKYANSILDSKLRDLMMLGVGYHHAG
VDLSDRKLVEEAFTLGDLPVLFTTRTLAMGVNLPAHLVVIKSTMQYVAGSCEEYSEADIL
QMIGRAGRPQFDTSATAVIMTKVHTREKYMKLMNGIEITESSLHSHLVEHLNAEIVLQTI
SDVNMALDWIRSTFLYIRALKNPSHYGFSANLDSYGIEAKLQELCLKTLNSLSAIDLITM
DEDINIKPTEAGRLMARYCVAFETVQLFTKVTGSETLPDLVDLVSKSKEFRDVQLRVNEK
KTLNTLNRDKNRATIRFPLEGKIKTSEMKVNCLIQAQLSSISIQDFGLTQETAKIFRIGM
RISKCLSEFLTQQSKTGFCAALNSLILAKCFRAKLWENSPFVSKQMEKIGLTLSTAMVNA
GLTSFSKIEQTNPRELELILNRHPPFGNQIRESVVHLPKYDINLEQLPRYSSTTAEIVVK
VTLQNQAQLLSRRTAPDHHYVSLIIGNSENHVVILHKLKDSLLLKSGSWTKKVDVPKASK
GNEISVNLISSEYVGLDIQLRFPVYYSAAAQNLETEIPQSKTDNLVGQRAQHSHCSETQK
TSSAKQDSASKRQCNHFCKNKNLCAHDCCKVGVAVGQKRSANHESSFSSYLEDLRNRSDV
LAQTPVKRLKIKMSEEHLSVSMKRFAYKPRETLPSGSWHAGNGYKSADMELTAEHYAELP
DVVCLEDFDRDYCFYAEDGPEGLAEISQTSPAAPAYHQNSSKWMTLKSGSGSRPPPNQIS
TVSSASSRWSTAVPEQKKPYKSPSSLQIPSVTFDLGNEWDDWRDFDDENLLNASETSPPL
CESSFQPQMQQHVQNKISAPVLISSSQAEPCMTTFTTSLRLISHPSPEIRKVGPSSISQS
FTSQKRISLDWDKQRPNVFSDVFNVKTPEKLPAHTLGGQVSRRLDFFSAMNATSSANLPL
HKSKEEEAFLGIFDGIF
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgcagatgactgcacggtgtccttggacagtctgttttttgagaagcctact
gtacacaaggtgaaaccattgcctctggaaggcagtcagtggcagttagatgcacctcca
cctcttacacatatcccagccactcaggacatgcaacaggaggctgaatctctctctgcc
ttgtacagtttcacacagaaacccaagaagttccagcctccttttaaaggactcaatgcc
tcttcatcaaaaatcaacagtttctacagttttaatgatgaagagagaagatttgaggag
actcaaggtgattgcaccagcaacctcaggggaaataatggttgctctggtgatgacggg
ctaaaggattatcctgacggtagttttatgagtggcggaggtggagatgaaacccggctg
gactcttgtcatgtggctatcagcagatgcttgcatggtctacctttaagaagaagcttg
ttcaggagtcctacgctgagcgacgcaggtgatttgtcgaccaacgtcgacctcaagtct
cgcagcgggaatggcggcggcggcggcgagaaaacatccagacctcaaacttttctcagc
ccggttgccatggcaaccgtgcctcctgctctccaactaccacaggctgctgtcggtaaa
gcggctcctccgttctcctgctcgtctgcggtgagtgtgcgacccctgcagcaggcgcca
catgcagaaacgctggacaaaggtgcaaagagagccttcgttccacccatgacgcctcaa
ccgctgcacatacaaggatcttctggctctgaagttctgcgtcccgtgtcagaaatccca
gtgaaattcagatccatctttagcgagttcccctttttcaattacgtccaatccaaagct
ctggatgatgttctttatacaaacaagaactttgtagcctgtgctccgactggatcgggg
aaaacggttctgtttgagctcgccatcattcgcctgttaatggagactcaggaaccatgg
agagatgtcaaagctgtgtatatggctcccatcaaagcgctctgcagccagtgttatgac
agctggagcaagaagttcggtcctctggggctgacctgcaaggagctgaccggtgacaca
gagatcgatgacttgttcgagattcatgactcccacatcatcctgaccacgcctgagaag
tgggacagcatgacaaggaaatggaaggataattctctgctgcagcttgttagactcttc
cttattgacgaggttcatgtggtgaaggatgcaacccgtggcgccacgttggaagtggtg
gtgagcagaatgaaggcagtgaattcatacaggacatctcagaacccagagggaggcatc
acaatgagattagtggctgtgtcggccacaatccccaacatatgtgacatagctgactgg
ctgtccaatgggagcgagccggcctcctatctgagtatggatgagagccaccgtccagta
aagcttcggaaggtggtcctgggattcccctgcagtgggacacaaacagagttcaagttt
gatttatctctcaactacaagatggccaacataatacagacatactctgaccagaagcct
acgctagtgttttgctcaacaaggaaaggagctcagcagtcggctgcagttctggccaag
gatgcccgattcataatgagctttgaacacaagcaaaggttgatgaaatatgcaaactct
attctggattcaaaactgagagatctgatgatgttaggagttggttaccaccatgcaggc
gttgacttgtctgacaggaagctggtagaagaggccttcaccctgggagacctgcctgtc
ctatttacaacccggactctggctatgggggtgaaccttcctgctcacctggtggtcatc
aagtcaacgatgcagtatgttgccggctcctgtgaagagtacagcgaggctgacatcctg
cagatgattggccgggcgggtcggcctcagtttgatacatcagcaactgcagtgatcatg
accaaggttcacaccagagagaaatacatgaaacttatgaatggtatagagatcactgag
agcagcttacatagtcacctggtggaacacctgaatgctgagattgttctccagaccatc
agtgatgtcaacatggctctcgactggatacgctccaccttcctgtacatcagagccctt
aagaacccgtctcactacggtttctcagccaacttagacagctatggtattgaagcaaag
ttgcaagaactgtgtctgaagaccctcaactctctgtcggccattgatttgatcaccatg
gatgaggatatcaacatcaaacccacagaagctggtaggttgatggcgaggtactgtgta
gcctttgaaacagtgcagctgttcaccaaagtaaccggcagcgaaacactgcctgacctg
gttgacctggtgtcaaagagcaaggagttcagggacgttcagttgagagtaaatgagaag
aaaaccctgaacaccttgaacagagacaagaacagggccaccatcagatttccacttgag
ggaaagatcaaaaccagcgagatgaaagtgaactgcttaattcaggctcagttgagctct
atctcaattcaagactttggtcttacacaagagactgcaaagatctttagaatcgggatg
cgaatcagcaaatgcctgtcagagtttcttactcagcaatctaagactgggttttgtgct
gcacttaactccctgatcttagctaagtgctttagagctaagctgtgggaaaactcacct
tttgtttccaaacagatggagaagataggtttgactctgtcaacagcgatggtgaatgct
ggcctcaccagtttcagcaaaatagagcaaaccaaccccagagagctggagctgattctt
aacagacatccgccatttggaaaccaaatcagagaatctgtcgttcatcttccaaagtac
gacattaacctggaacagctgcccaggtacagcagtaccacagctgagattgtggtaaag
gtgaccctacaaaaccaagcccagctgctgtccaggagaacagctccagaccatcactac
gtttctctgatcattggcaactctgaaaaccatgtagtcattctacacaaactcaaggac
tcgttgctgctcaagtctggtagctggaccaaaaaggtagatgtgccaaaggcttccaaa
ggaaatgagatcagtgtcaacctcatcagctcagaatatgtgggtctggacatccagctg
aggtttcctgtgtactactctgctgcagcccaaaatcttgagactgaaattccacaaagc
aaaacagataatcttgttggacaaagagctcaacactcacactgctctgagactcaaaaa
acctcatctgcaaagcaagactcagccagtaaaagacagtgcaatcatttctgcaaaaat
aagaacctctgtgctcatgactgctgtaaagtaggtgttgctgtaggacagaaaaggtca
gccaaccatgaatccagcttctcctcttacttggaggacctgaggaacagatctgatgta
cttgcacagacccctgtcaaacgccttaagataaaaatgagtgaagagcatctgtctgtc
agcatgaagaggtttgcctacaaacccagagaaacgcttccctctggctcctggcatgca
ggaaatgggtataaaagtgccgacatggagctgacagctgaacactatgctgagctgcct
gatgtagtttgtctggaggattttgacagagattactgtttctatgcagaagacggtcct
gagggattggcagagatttcccaaacttctcctgcagcacctgcttatcatcaaaattcc
tcaaagtggatgaccctgaaatccgggtcgggctccagaccacctccaaaccagatcagc
acagtcagctcagcttcgtcgcgctggtccactgcggtgccagaacaaaaaaaaccctac
aaaagtccttcatctctccaaataccaagtgtcacctttgacctgggaaatgaatgggat
gactggagagattttgatgatgaaaacttgctgaatgccagcgaaacatcaccaccccta
tgtgaaagcagctttcagcctcagatgcagcagcatgttcaaaacaagatatcagcacca
gtgctgatcagcagctcacaagcagagccctgtatgactactttcactacatcactgagg
ttgatttcacatccaagtcctgaaatcaggaaagttggaccctcttctatcagtcagtcg
ttcacatcacaaaagaggatttcactggactgggataaacagagaccaaatgttttcagt
gatgttttcaatgtgaaaacacctgaaaaactcccagcacacactctgggtggacaggtt
agcagaaggttggatttcttctctgcaatgaatgcaacatccagtgccaacctgcctctt
cataaaagcaaagaggaggaagctttccttggcatatttgatggtatattctag
DBGET
integrated database retrieval system
