Poecilia mexicana (shortfin molly): 106929258
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Entry
106929258 CDS
T08022
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106929258 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106929258 (cstf2)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
106929258 (cstf2)
U7-dependent histone pre-mRNA processing factors
106929258 (cstf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
106929258
NCBI-ProteinID:
XP_014861541
Ensembl:
ENSPMEG00000017743
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MANVAAATVAAAAAAAAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRL
VYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTG
APIIESPFGDSVSPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQ
LAYALLQAQVVMRIVDPEIALKMLHRQTAVQPLVSSSQGGGAPPVNPPVQPNVQVSQPQP
VPVMHVNGAPQMMQPANMGVVPNMPVPGPVPGPGQIGPPGNLQNSPTGSAGPAAIERPQG
PGGIPPRGLLGDGPNDPRGGTLLSVTGEVIDPNRAYMAAPPPHQAPPVHIPQMGGGPQMG
GGPQMGGGPQMGGGPQMGGGPPEMRGPPMPEPRTMMVDPRGPPMMEPRGPPMEPRGRDPR
AMDARGPVAGQRVPMVPGMQGPVSHAMGPNVPPPARPGPGISGVAPSGGGFSPGQSQVST
QDQEKAALIMQVLQLTPEQIAMLPPEQRQSILILKEQIQKTASGAP
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgttgctgcagctaccgtggccgctgcggccgcagctgccgccgcgaacaga
gacccagccgtggataggtcactacgatcggttttcgttggaaacattccatatgaagcc
acagaagagcagttgaaagacatattctccgaagtcggacttgttgtaagcttcaggtta
gtgtatgacagagagacaggaaagccaaagggatatggcttctgtgaataccaggaccag
gaaacggccctcagcgccatgaggaacctgaacgggagagagttcagtggtcgggctctc
agagtcgacaatgcagctagtgaaaaaaataaagaagagctcaaaagtctgggcaccgga
gcccccatcatcgagtctccttttggagacagtgtgtcgccagaggaggctccagagtcc
atcagcagagctgtggcgagtcttccacctgagcagatgtttgagttgatgaaacagatg
aagctgtgtgtacaaaacagcccccaggaggcaagaaacatgctgctgcagaacccgcag
ctggcctacgctctgctgcaggcgcaggtggtgatgcggatcgttgacccggagatcgcc
ttgaaaatgttgcatcgtcaaacagctgttcagccgctggtgtccagcagtcagggtgga
ggagcaccgcctgtcaatcctccggttcagcccaacgtgcaggtgtctcagccacagcct
gtgccggtcatgcatgtgaatggagcccctcagatgatgcagcccgccaacatgggcgtt
gtccccaacatgcctgtaccgggccctgtaccaggacccggacaaatcggacctccagga
aacctacagaattcccccacaggatcagccggacccgccgctatcgagcggcctcaaggg
ccgggcggtatcccacccagaggcctgttgggcgatggacccaatgatcccagaggagga
actctgctgtctgtcaccggagaggtcatcgaccccaaccgggcctacatggccgcgccg
ccgccccaccaggctccgcccgtacatatacctcagatgggaggcgggccacagatggga
ggcggacctcagatgggaggcggacctcagatgggaggtggacctcagatgggaggcggg
ccacccgaaatgagaggccctccgatgcctgagccacggaccatgatggtggatccgcga
gggccgccgatgatggagccgcggggaccaccaatggaacccagaggccgtgacccgagg
gcgatggacgctcgcgggccggtggcgggtcagagggttcccatggtgcccgggatgcag
ggcccggtctcccacgccatgggtccaaacgttcctccgcctgcaagaccgggtccgggt
atttctggcgtcgcgccctcaggaggaggcttcagtcccggccagagtcaggtctccact
caggatcaggagaaggccgccctcatcatgcaggtcctgcagctgaccccggagcagatc
gccatgctgccgccggagcagcggcagagcatcctcatcctcaaggagcagattcagaaa
accgcctctggcgctccgtga
DBGET
integrated database retrieval system
