Poecilia mexicana (shortfin molly): 106929334
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Entry
106929334 CDS
T08022
Symbol
ushbp1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1 isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmei03037
]
106929334 (ushbp1)
Cilium and associated proteins [BR:
pmei03037
]
Primary cilia and associated proteins
USH complex and associated proteins
106929334 (ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-GeneID:
106929334
NCBI-ProteinID:
XP_014861675
Ensembl:
ENSPMEG00000015150
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MEDSKRSRCNSLDTSSLFNKDVLSHGGFVTFDPEASEPLIGHEPTPAEVAQCEAEVSTLL
SIIADLNKKMGSLKAPRVDSSSDPGDTRPPRPSRPLVPPDLLSHRLLRSSPESSSASAAA
SKHPATSQGGGGVVWTQLQEVLSSVEDSISFRRTWAAPITASDQNKDTEHLRAAQENWTK
ATQMLEEIERDFGISCSVGMPKEQHLDDFLDLEKHESVLRNNMPSHNDELQRAPSNIFSL
EDEKNKVLHLAGLHKAWRSDRFSPSYRPPSGALSPDRPPPSYPGSPLLHRRTSRAATPLS
LGGDGTPLGCVTPSSPCPSPISLESETDRLNRCIERLKARNERLTAALERRKADSEQISL
KLCRLESDCSALQMALRYSEECEEAYGELLFLYEAKLQQCPPLQIHSAEPMCDMQQSAQN
PEMGTEELSTSFCTAGVTEETQTRHRTPDPADREAILRQQIERLKRERAAICPAKPGPGA
EVRLSSETGQAVGTRWGHMMKDHSKPPESKREKASLFYELISVREEMSDLRALIRLKEKE
LRCLEWGLMGQKSQEAAGVFIPENLRDEAEDRKTEQRFGENAAKPVNDGEITSSLTRPIL
KELQAVLQREQALKRRLAMVHDSLNSALANGAPHRKDNAEQIARLTQAHSKALSSYRQIR
RKYREQVWRLEQKVAAMMESQHSQSEAAKAAEEGAEWRKEETIL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccaaaagaagcagatgtaacagccttgataccagctccctgtttaacaag
gatgtgctgagccatggtggctttgtgacctttgaccctgaagcctctgagcctctgatt
ggccatgagcccacaccagcagaggtggctcagtgcgaagcagaagtaagcaccctgctc
agcatcatcgctgatttaaacaagaagatgggatcgctaaaggctccgagggttgactct
tccagtgatccaggagacacgagaccgccacgtccgtccagacctctggttcccccggac
cttctgtctcaccggctgctcagaagcagcccagagagcagctctgcttctgctgccgca
tccaaacatccagcaaccagccaagggggcggtggtgtcgtctggacacaactgcaggag
gttttatcatcggtggaggactcgatcagcttcagaaggacgtgggctgctccaatcaca
gcctccgaccagaacaaggacacggagcacctgagagctgctcaggagaactggaccaaa
gccacacagatgctggaggaaatagagagagactttgggatttcatgttctgtgggaatg
ccgaaggagcagcacctggacgacttcttggatctggaaaaacacgagtctgttctcagg
aacaacatgccgagtcacaatgatgagctgcagagagctccaagtaacattttctcactg
gaagacgagaaaaacaaggtgctccacctggctggtctccacaaggcctggaggtctgac
aggttttctccttcataccggcctccttcaggagctctcagtcccgaccgaccgcctcct
tcctaccctggttcacctttactccacagaaggacgtccagagctgcgactcctctgtct
ttgggtggggacgggactccgctgggctgcgtgaccccgagcagtccctgccccagcccc
atcagcctggagtcagagaccgacagactgaatagatgcattgagaggctgaaggccaga
aacgagcgtctgactgcggctctggagcgaaggaaggcggattcggagcaaatcagtcta
aaactgtgtcgactggagtctgactgctctgccctgcagatggctcttagatacagtgag
gagtgtgaggaggcctacggcgagctgctgttcctttatgaagccaagctgcagcaatgc
ccccctctgcagatacactcagcagagccaatgtgtgacatgcagcaatcagctcagaac
ccggagatgggaactgaggagttatccacctctttctgcacagctggagtcacagaagaa
acccagacgaggcacagaactccagatccagcagaccgggaagcaattctccgacaacaa
atcgagcgactgaaaagggaacgggcagccatttgcccagcaaagccaggtccaggagcc
gaggtcagactgagctcagaaaccggtcaagcggtcggtaccagatggggccacatgatg
aaggaccacagcaaacctcctgagagcaagagggagaaagcatcgctgttttatgagctg
atctcagtcagggaggagatgtcagatcttcgagctttaatccgtctgaaggagaaggag
ctgcgatgtcttgaatggggcttaatgggacagaagtctcaggaagcagctggagttttc
atcccagaaaacctcagagacgaggcggaagatcggaagaccgaacagaggtttggtgaa
aacgctgccaaacctgttaatgacggtgaaatcacgagttctctgacccgacccattctg
aaagagctgcaggccgtcctacagagggaacaagccctgaagagaaggctggccatggtc
cacgactcgctgaactccgctctcgcaaacggcgccccccacaggaaggacaacgcagag
cagatcgctcgactcacacaggcgcacagtaaagctctgagttcctacaggcagattcgc
aggaagtatcgggagcaggtgtggcggctggagcagaaggttgcagctatgatggagagt
caacacagccagagcgaagcagccaaagctgcagaggaaggagcagagtggaggaaggaa
gagacgattttataa
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