Poecilia mexicana (shortfin molly): 106929381
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Entry
106929381 CDS
T08022
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106929381 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmei03036
]
106929381 (mbd4)
03400 DNA repair and recombination proteins [BR:
pmei03400
]
106929381 (mbd4)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
106929381 (mbd4)
DNA repair and recombination proteins [BR:
pmei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106929381 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
106929381
NCBI-ProteinID:
XP_014861785
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MEVESNKEALPHGWVREVRQRKAGKTAGKLDVYIISPSGQRFRSKSSLRDYLLKNGGENL
DMNLFDFTSSKTKFTSSETDHSKETQEKWTKKQANGQQDKTGGKVKSARHESKNSFSSTR
CKVRKSKVTPAVEDTKSNTLQEDIAEEAEQISSQATSSSDLADDDYTPQSPRRVGLLREK
ILRLAPSSDQQNTFLPAHRNQPAKAPPSVPTLNVEAATESENESENVANTDVAQPHSKGD
NKSNSEVVDNADSHREEEVLSDNSGGSCTPVRDSHNRSKNVESRRKTSPYFSAKCLKDGL
SPPRRKSLRKWTPPRSPFNLIQETLFHDPWKLLVATIFLNKTSGKMAIPVLWVFFERYPS
AEVTREADWKPMSELMKPLGLYELRAKTIIRFSDEFLNKQWRYPIELHGIGKYGNDSYRI
FCVEEWRQVTPEDHKLNKYHAWLWENHKTLGI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgagagtaacaaggaagcactaccacatggatgggttagagaagtgaggcag
agaaaagctggcaagactgcaggaaaactggacgtgtacataataagtcccagtgggcag
aggttccgatctaagtcgtccttgcgtgattatctgttaaaaaatggaggagagaacctg
gacatgaacctgtttgatttcacctcatccaaaactaagttcaccagctctgaaacagat
cattccaaagaaacgcaagagaaatggacgaaaaagcaagcaaatggacagcaggataaa
acaggtggaaaagtgaaatctgccagacatgaatctaaaaacagcttttcctctaccaga
tgtaaagtcaggaagagcaaggtaacgcctgctgttgaggatactaaaagtaatactttg
caagaggacatagctgaggaggctgagcagattagctcacaagctacatcttcatcagac
ttggcggatgatgattatacaccccagagcccccggagggtgggactgttgagggagaaa
attctgagactggctccttccagtgatcaacaaaacaccttccttccagctcacaggaat
caaccggcaaaggcgccgccttcggtcccgactctgaatgttgaagctgccactgagagc
gagaatgaaagtgagaacgtggcaaacacagatgttgcacagcctcacagcaaaggtgac
aacaagtctaattcagaggtagtggataatgctgacagtcacagagaggaggaggtgtta
tctgacaacagtggtggaagctgcacaccagttagagattcccataatagatccaagaat
gtggagagcaggcggaaaacaagcccttatttcagtgcgaaatgtctcaaagatggactc
agcccacccaggaggaaatctctcagaaaatggacacctccccggtctcccttcaacctc
atacaggaaacccttttccatgacccctggaagctcctggtggccactatttttctgaat
aagacaagtgggaaaatggccattccggtgctttgggtgttctttgagcgctacccatct
gcagaggtgacccgggaggccgactggaagcccatgtctgaactcatgaagccacttggg
ctctatgagcttcgagccaaaacaatcatccgcttctccgatgagtttttaaataaacag
tggcgctaccctattgagttgcacggtattggcaagtacgggaacgactcctacaggatc
ttctgtgttgaagagtggaggcaggtgactcctgaagatcacaagttaaataaataccat
gcctggctgtgggagaaccataaaacgttgggaatatga
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