Poecilia mexicana (shortfin molly): 106929395
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Entry
106929395 CDS
T08022
Symbol
shh
Name
(RefSeq) sonic hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
106929395 (shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmei01002
]
106929395 (shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmei00536
]
106929395 (shh)
Peptidases and inhibitors [BR:
pmei01002
]
Cysteine peptidases
Family C46: hedgehog family
106929395 (shh)
Glycosaminoglycan binding proteins [BR:
pmei00536
]
Heparan sulfate / Heparin
Morphogens
106929395 (shh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Intein_splicing
Peptidase_M15_3
Hint_2
Vint
DUF2092
Hom_end_hint
Motif
Other DBs
NCBI-GeneID:
106929395
NCBI-ProteinID:
XP_014861805
Ensembl:
ENSPMEG00000013400
UniProt:
A0A3B3X8P4
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MHQRWTRIASVALICLSLVSSAVGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGAS
GRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRMMTQRCKDKLNSLAISVMNQWPG
VKLRVTEGWDEDGHHFDESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKA
HIHCSVKAENSVAAKSGGCFPGTSTVTLQDGTKKPVRDLQPGDRVLAADGDGNPIFTDFI
MFIDRDSTTRRTFYVIETETGQKITLTAAHLIFVARENSTRSATFASDVRPGQKVFVYDG
ERSRVVAVNVNRIYTQEHEGSFAPVTAQGTVVVDQVLASCYAVIEDHELAHWALAPVRIA
HWVSSSLFVSRPRVRAHNEGVHWYSKLLYQLGTWLLDDHSIHPLGMSAYPS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcgctggaccagaatcgcttctgtcgctctcatctgcttgtccttggtgtcc
tccgcggtgggatgcggaccgggcaggggctacggcaggaggagacaccccaagaagctg
acacctctggcgtacaagcagttcatccccaacgtggcggagaagaccctgggggcgagc
ggtagatacgagggcaagatcacacggaactccgagcgctttaaagagctcactcccaat
tataacacagacatcatcttcaaggatgaggagaacacaggagccgacaggatgatgact
cagagatgcaaggacaagctgaactcgctggccatctctgtgatgaaccagtggcctggg
gtgaagctccgggtcacagagggctgggacgaggacgggcaccacttcgacgagtccctg
cactacgagggcagggccgtggacatcaccacctcggacagagacaagagcaaatatggc
actttgtccaggctcgccgtggaagccggattcgactgggtctactatgagtcaaaggcc
cacatccactgctcggtgaaagcagaaaattcagtggcagcaaagtcaggcggctgcttc
ccgggaacctccacagtcaccctgcaggacggcaccaagaagccggtcagagacctccaa
cccggggacagagtcctggctgcggacggcgacggaaacccgatcttcaccgacttcatc
atgttcatagaccgagactccaccaccaggaggaccttctacgtgatcgagaccgagacg
ggccagaagatcaccctcactgccgcgcacctcatcttcgtcgcccgcgagaactccacg
cggtcggcgacgttcgccagcgacgtgcgacccggacagaaggtgttcgtctacgatggg
gagcggagtcgagttgtggccgtgaacgtgaaccggatttacacgcaagagcacgagggc
tccttcgcgcccgtgacggcacaggggaccgtggtggtggatcaggttctggcgtcctgt
tacgctgtgatcgaggaccacgagcttgcgcactgggccctggcgcccgttaggatcgcc
cactgggtgtcctcatcgctgttcgtctcccggcctcgggtcagagcgcacaacgagggg
gtgcactggtactccaaactcctttaccagctggggacgtggctcttggacgaccactcg
atccatccactggggatgtcagcatacccaagctga
DBGET
integrated database retrieval system
