Poecilia mexicana (shortfin molly): 106929500
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Entry
106929500 CDS
T08022
Symbol
sox5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmei03000
]
106929500 (sox5)
Transcription factors [BR:
pmei03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106929500 (sox5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
106929500
NCBI-ProteinID:
XP_014861973
Ensembl:
ENSPMEG00000005298
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MLTEPELPQECNRMSSKRPASPYGGTDGEVTMATSRQRVEDEESEGPGGVIHLPLASYCG
KVSPHSPPSRHLDSPPSTEHDGIKGSSLSPYPQHNATSPGKEEGGGGGRPCSDGGSATGT
LGTPERRKGSLADVVDTLKQRKMEELIKNEPEEAPSIERLLSKDWKDKLLAMGSGHIGEI
KGTPDSLAEKERQLMGMIGQLSSLREQLLAAHEEQKKLAASQMEKQRQQMELAKQQQDQI
ARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAAQQGFLMPPGFNY
KPGCSDPYPLQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGTKQHGGSLAPQA
NLGAHSPPTNSHPQGDKNRSSPSSNKNKDSEGAQPLNLSAKPKASESKSPNSPPTSPQVP
AAAAATTKLGPAGSMKHSAVPSSIGAPSTRVSSIDLLSSLSSTAYLNDHEAVSKAFAEAR
QMKEQLKGEQQALDAKMASVSNLSLNNGRSDKDKAALESLSQQLKQQADDKFSHAMLDFT
MSGDSDGSPSVSDSRIFRETRGRNNNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNI
SKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYK
AIMRSRRQEMRQYFSVGQQGQLPLSSAGMVYPGALSMAGMPSPQMPSEHSSMSSSPEPNA
NHHQNPHMPGLKGDEPRIKEEELRLDDSNGDVYDDFDYEDEEADYASDNDNHIPH
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgctcactgagcctgagctacctcaggagtgtaacaggatgtcttccaagcgaccagcc
tctccatatggggggacagatggagaggtaaccatggcaaccagcagacagcgagtggag
gacgaggagagcgagggaccgggcggtgtcatccacctccccctggcctcctactgcgga
aaggtgtcccctcactcgccccccagccgccacttggatagcccccccagcacggagcac
gacggcatcaaggggagctctctgagtccgtacccacagcacaacgctacctcaccaggc
aaagaggagggcggaggcggggggcgaccctgcagcgacggcggctcggcaaccggcacc
ctggggacccccgagagacgcaagggcagcctggcggacgtcgtggacacgctgaagcaa
cgcaagatggaggagctgatcaaaaacgagccagaagaggcccccagcattgagaggctg
ttgtcaaaggactggaaggataaacttttggccatgggctcagggcacatcggagaaatt
aaaggtaccccagacagcctggcggagaaagagcgccagctcatgggcatgattggccag
ttgagcagcctgagggagcagcttctggcggcgcacgaagagcagaagaagctggccgcc
tcacaaatggagaagcagaggcagcagatggagctggccaagcagcagcaggaccagatt
gcccggcaacagcagcagctcctgcagcagcaacacaaaatcaacctcctgcagcaacaa
atccagcaggtccagggccagctccctccactgatgattcccgtgtttcctcctgaccag
cggaccctggcggccgccgcagcccagcagggcttcctaatgccccctggcttcaactac
aagcctggctgcagtgacccctaccctctccagctcatccccacaacaatggccgccgct
gccgccgccacgcccggcctggggcccctgcagctacaacagttgtacgcagctcagctg
gcggccatgcaggtctccccggggacgaagcagcacggtggcagcctcgcaccccaagcc
aacctgggcgctcactccccacccaccaactcacatccacagggcgacaagaaccgcagc
tccccatcttcaaacaaaaacaaggacagtgagggtgcacagccactgaacctgtcggcc
aagcctaaggcatccgagagcaagtcacccaactcccccccaacttccccacaggttcct
gctgccgctgccgccaccaccaagctgggtcccgccggctccatgaagcacagcgccgtg
ccctccagcatcggagcgccatccaccagagtcagctcaatagacttgttgtcttcgttg
tcgtcgacagcctacctgaacgaccacgaggcggtgagcaaggccttcgccgaggcccgg
cagatgaaggagcagctgaagggggagcagcaggccctggacgccaagatggcctccgtc
agcaacctcagcctcaacaacggccgctccgacaaggacaaagctgccttggagagtttg
agtcagcagctgaagcagcaggccgacgacaagttcagccacgccatgctggacttcacc
atgagtggagactccgacggatcccccagcgtatccgactccagaatatttcgggaaacg
cgtggcaggaacaacaacgagccgcacattaagcggccgatgaacgccttcatggtttgg
gccaaggacgagaggcggaagatcctccaggccttcccagacatgcacaactccaacatc
agcaagatcctcggctcgaggtggaaagccatgaccaacctggagaagcagccttactac
gaggagcaggctcgcctcagcaagcagcacctggagaaatacccggactacaagtacaag
ccgcggcccaaacgcacctgcctggtggacggcaagaagctgcgcatcggcgagtacaag
gccatcatgaggtcccgcaggcaggagatgagacaatacttcagcgtagggcagcagggc
cagctgcccttatcctctgcaggcatggtctacccaggtgccctttcaatggcagggatg
ccctccccccagatgccctcagagcactcaagtatgtccagcagcccagagcccaacgcc
aaccaccaccagaacccccacatgcccggactgaagggggacgagccacgaatcaaggag
gaggagctgcggctagacgacagcaacggtgacgtgtacgatgattttgactatgaggac
gaagaggctgactacgccagcgacaacgacaaccatatcccccattaa
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integrated database retrieval system
