Poecilia mexicana (shortfin molly): 106929651
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Entry
106929651 CDS
T08022
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106929651 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmei03041
]
106929651 (usp39)
Spliceosome [BR:
pmei03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
106929651 (usp39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
106929651
NCBI-ProteinID:
XP_014862213
Ensembl:
ENSPMEG00000002370
UniProt:
A0A3B3WFX3
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MSNRPPGSRITYEMISLKRERDNEEDDDDHEDGVAVKRGRGRVGEDRRSRHCPYLDTINR
SVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGQKSHAYTHSVQFSHHVFLNLHTLKFY
CLPDNYEIIDSSLEDITYVLKPTFTKQHIAALDKHGKLYRAYDGTTYLPGIVGLNNIKAN
DYANAVLQAFSNVPPLRNYFLEEENYKDIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAH
VSPHEMLQAVVLCSKKTFQITKQGDAVDFMTWFLNALHGALGGTKKKSSIITKVFQGSMR
IFSKKLPHPDLLPEEKEALLLTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVP
LFNILGKFNGNTEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFP
ITNVDLSEYLTEEAQATEKNTSYDLVANIVHDGKPTEGSYRIHVLHHGTGKWYEMQDLQV
IDILPQMITLSEAYIQIWKRQESSDTNNHRGV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcgaccaccgggcagcagaataacgtatgagatgatttctttgaagcgcgag
agagataatgaggaggatgacgatgatcacgaagacggggttgctgtcaaaagaggtcga
ggacgtgtaggagaagaccgtagaagccgccactgtccttatcttgacaccataaacagg
agtgtgctggattttgacttcgagaagctctgctctatctccctttcacacatcaacgtg
tatgcttgcctcgtatgtgggaaatactttcaaggcagaggtcagaagtctcatgcatat
acccacagtgtacagtttagccatcacgtgttcctcaacctgcataccctcaagttctac
tgtctgccagataactatgagatcattgactcttccctagaggacattacgtatgtactg
aagccgactttcaccaagcagcacattgcggcactggacaagcacggtaaactgtacaga
gcctacgatggaacgacttacctgccaggcatcgtggggctcaacaacatcaaagccaac
gactacgccaacgcggtgctacaggctttttcaaatgttccacctttgcgaaactacttt
ctggaggaggaaaactacaaggatatccgcagaccaccgggggacatcatgttcctcctg
gtccagaggtttggggagctgatgcgcaaactttggaatccgagaaactttaaggcgcac
gtgtccccacatgagatgctgcaggccgtcgtgctgtgcagcaagaaaacctttcaaatt
actaagcagggtgatgctgtagacttcatgacatggttcttgaatgccctgcatggagct
cttggaggcacaaagaagaagtcatcaatcatcacaaaagtttttcaaggctccatgcga
atcttctctaagaaacttccacacccagatttgctgcctgaagaaaaagaggcgctgctt
ctcacagaggagtaccaagagcagatgtctgagtccaccttcctgttcctgacccttgac
ctcccgacagctcctctctacaaagacgaaaaggagcagctgattatccctcaggttcct
ctcttcaacatccttggcaaattcaatggcaacactgaaaaggagtacaaaacctacaaa
gagaatttcctcaaacggttccagctgaccaagttgccaccttacctcatcttttgcatc
aaaagattcaccaagaacaacttctttgtggaaaaaaacccaacaattgtcaacttccca
atcaccaatgtagacctttctgagtacctcacagaggaagcgcaagctacagagaagaat
acttcctatgaccttgttgcaaacattgtgcatgatggaaaaccaactgaagggtcctac
agaatacatgtcctgcatcatgggacggggaagtggtatgagatgcaagacctgcaggtg
atcgacattctcccccagatgatcacattgtcagaggcctacatccagatttggaaaaga
caagagagcagtgacacaaacaaccacaggggggtgtaa
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