Poecilia mexicana (shortfin molly): 106929764
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Entry
106929764 CDS
T08022
Symbol
atg16l2
Name
(RefSeq) autophagy-related protein 16-2 isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106929764 (atg16l2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106929764 (atg16l2)
03029 Mitochondrial biogenesis [BR:
pmei03029
]
106929764 (atg16l2)
Membrane trafficking [BR:
pmei04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
106929764 (atg16l2)
Others
Specific organelles associated proteins
Auto phagosome
106929764 (atg16l2)
Mitochondrial biogenesis [BR:
pmei03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106929764 (atg16l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
ATG16
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_NWD2_C
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR75_1st
Cytochrom_D1
Beta-prop_NOL10_N
Ge1_WD40
TFIIIC_delta
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
106929764
NCBI-ProteinID:
XP_014862371
Ensembl:
ENSPMEG00000022036
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MDPGGASRRSSRSAETWRGHIIQQLKHRDRIQSAMFQDLIRFYTGLLEKTSMTKGLLSSS
GRPPAEGCARSSLQQLKKTTGELAYKVVELQQQIKIKERVLQELQTRLQKEGGRLAEASE
AKRALGDEVEQVRQKNKTLKAAYDALLQRQREAESKLREEKEKEERVLEDMMHQKKQAAA
RMNHRNERRSRARQATVQKQLQTAARSKVIVDSSSSAPTSRSTSPKPEDQDKSGGRGATR
LFRSASASSPRFFSSIREMFEKRRGHSVRSLEEDLLFPVGICLSARVPVRPLQVLEAHEQ
GINAVRFSFGSDLLATGGTDRVIKLWDVRAGSLTHRATLDGSTEGITCVEFDHMGRRILA
ASHNKSALLWRLDDSVPKVTLTGHSRKVTAARFTCVPHQVVTGSTDRTVRLWDLNRAACV
QQGEVASFCSDLVCSDSSIISGHFDCKIRVWDSRTVNCVQELPSQGRVTSLDLSSDRRQL
LSCCRDDCLQLLDLRWTNDRMCFRADGFKCGGDSTKAVISPDGCYLAAGSTDGAVYIWNV
STGGLEARLPDQHSSSITAVSWSLSGEHFVSVDRSRRAVLWSDI
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggcggggcgtcgcggcgaagcagccggtccgcggagacctggagagggcac
atcatccagcagctgaagcaccgggaccggatccagagcgccatgttccaggacctgatc
cggttctacactgggctgctggagaaaaccagtatgaccaaagggctcctcagcagctcc
ggcagacctcctgctgagggctgcgcccgttcctctctgcagcagctgaagaagacgaca
ggcgagctggcctacaaggtggtggagctgcagcagcagattaaaatcaaagagcgtgtc
ctgcaggaactacaaaccagactacagaaggagggcggtcggctagcagaggcgtccgaa
gctaaacgggctctgggggatgaggtggagcaggtcagacagaagaacaagacgctgaag
gcggcgtacgatgcgctgctgcagcgtcagagggaggcggagtccaaactcagggaagag
aaggagaaagaggagcgcgtcctggaggacatgatgcaccagaagaagcaggccgccgcc
cgcatgaaccaccgcaacgaacgccgctccagagctcgacaggcaaccgtgcagaagcag
ctgcagacggctgccaggtcaaaggtcatcgtcgacagttcgtccagcgctccgacttcc
aggtccacgtctccgaagccggaggatcaggacaagtccggcggccgaggagcgactcgc
ctcttcaggtcggcgtcggcctcctcgcccaggttcttctcctccatcagagagatgttt
gagaagagaaggggtcactcggtccgcagcctggaggaggatctgctgtttcccgttgga
atctgtctatcagccagagttcctgtcagaccgctgcaagtcctggaagcccatgagcaa
ggcatcaacgcggtgcggttcagcttcggctcggacctgctggccaccggcgggacggac
cgggtcatcaagctgtgggacgtccgggcaggctcgctgactcacagagccacgctggac
ggcagcacggaggggatcacctgcgtggagttcgaccacatgggccgcaggatcctggcg
gcgtcgcacaacaagtccgccctgctgtggcgcctggatgactctgtccccaaggtgact
ctgacgggtcacagcaggaaggtgacggcggccaggttcacctgcgtcccccaccaggtg
gtgacaggaagcaccgaccggaccgtccggctctgggacctgaacagagccgcctgtgtg
cagcagggggaggtggcgtcgttctgcagcgacctggtctgttctgacagcagcatcatc
agcggacattttgactgcaagatcagagtctgggacagcaggacagtgaactgcgttcag
gagcttccctctcagggcagagtcacctcgctggacctgagctccgaccggcgccagctg
ctcagctgttgtcgtgacgactgcctccagctgctggacctgcgctggaccaacgaccgg
atgtgcttcagagccgacggcttcaagtgcggcggcgacagcaccaaggcggtcatcagc
ccagatggatgctacctggcggccgggtccactgacggagccgtttacatctggaacgtc
tccaccgggggcctggaggcccgcctccccgaccagcacagctcgtccatcaccgccgtg
tcctggtctctctctggagaacacttcgtcagcgtggacaggagccggcgggccgtcctc
tggagtgacatctga
DBGET
integrated database retrieval system
