KEGG   Poecilia mexicana (shortfin molly): 106929867
Entry
106929867         CDS       T08022                                 
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
pmei  Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:pmei03037]
    106929867 (ift140)
Cilium and associated proteins [BR:pmei03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   106929867 (ift140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_Prp19 ANAPC4_WD40 Beta-prop_EML WDR55 TPR_IFT80_172 Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 Clathrin TPR_COPA_B Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd TPR_GEMI5 PEP5_VPS11_N PPR_1 Beta-prop_ELP1_2nd Rax2
Other DBs
NCBI-GeneID: 106929867
NCBI-ProteinID: XP_014862539
Ensembl: ENSPMEG00000017367
UniProt: A0A3B3XIN8
LinkDB
Position
Unknown
AA seq 1441 aa
MAVYFDHRIETPDRSNLPSHLTWHATLPILAVASSSPASGGSVDLYLQQGECVKSCHVDR
AQPAAALRWHPVKPVLVLGWESGEVVLLTHPSGDQTVLPAVHTARITLLEWSGSGSRLVT
GDQNGALAVWKLDARGRLLGNHLVKHDYNKPLTCCIFKPASPGVDVAMLARASVSGDESA
LDMFSWKGAPLKMGPQEGLGFYVSTANGKVHAVDEQGRTSPLLSEDGSIRKLFYLDKRGV
LVVVTDTLMLSQYTLRPEGGAHESMKVKLSSTAGQNVDIIWTENSLLITATGEPVVKIWD
LERDENYVLSLDETLGFKKGEMINCVSYCAAKEILAAGTSKGRIAMWKTATQPMSSSSYR
ADAKALWKLQTPTEIHGNVTQLQWGSNQNLLAANNSRTVLILSEHVMSAHFGQQVAAVQL
APTQLSITNFSSGETLPLQCDMHVRGVCVSKDSVTVWNGKHISVYELSGTALHVTGSFPC
DSHIVAVHDENLYTVEPSRVQIRTPQGTVKQLLTFSRAEGNPVLLDVCQSYLAVGTDTAH
IRVYDLSRRDAKAHCGAKNLSDHISGLGALRSVKCNASGSQVSLLASQVNGRPDHKVYFY
DIEMDTVTHFDFFTGRPSSGVSAPDESDKQKFQENEISGRFPVSQYWDESEPRLFVCETA
PIASEKSANAFSDLEDVSVVTLFCTQEHGLLLQDCFSRPSGLQALLALDVPYYYFTCKPG
EQNPEVSPPDQPIRAAPASPPLMASRRPLRDFVGLEKCEKGTRDAMLNFSFYLSVGDMDE
AFKSIKLIKSKAVWENMARMCVKTRRLDVARMCLGNMGNARAAKAVKEAEAEPEPEAQVA
MLAIQLGMLEDAEKLYKSCHRYDLLNAFYQASSEWQRALETAEAHDRIHLRTTYYNYAKY
LESMGHKNLALAYYEKSDTHRVEVPRMLQDDTASLELYVTKAKDKNIYKWWAQYLESQSN
METALLFYERAQDYLSLVRVHCYLGNIPEASQIANNTGDRAASYHLARHYEGHDDIKQAV
HFYTRAQAYNNAIRLCKENGLDDQLMNLALLSNPEDMMEAACHYEEKGKHLDRAVALYHK
AGYVSKALELAFATEQFAALQLIAEELDENSDPALLARCSDFFVQHSQYEKAVELLAAAK
KYSQAVELCLTHNLTITEDLAERMTVTDAKDLTEEASKALLEKIADCCMSQGSYHLATKV
YTQAGNKHRAMKALLKSGDTDKIAFFANVSRQKELFIMAANYFQSLDWRKNPKNLKRIIE
FYTKGKAPDLLGGFYEACAQVEIDDYQNYEKALDALMEAFKCLSKAKDGSSGQQEVRLAD
LQHKIVLIKKFVHIRRLHPEDPDEAVRLCEALLEEPELDPAVRIGDAYGFLIDHHCQQGR
LQTAYQKLEELQKLLPSQSIRFYISQASLDALQKEMGFPLESGDHKHVLREEDEVEEDLT
V
NT seq 4326 nt   +upstreamnt  +downstreamnt
atggcggtgtattttgaccaccgcatcgaaacccctgacagaagcaatctgccgtctcac
ctgacctggcacgccacgctccccatcctggctgtggcgtcgagcagccctgcttccggt
ggcagcgtggatctttacctgcagcagggtgagtgtgtgaagagctgccatgtggaccgg
gcccagccggccgccgcgctgcgctggcatcccgtaaagccggttctggttctgggctgg
gagagcggggaggtggtgctgctcacgcatccgtccggagatcagaccgtgctgccggcc
gtccacacggcccgcatcacgctgctggagtggagcggctccggaagccgcttggtgacc
ggagatcagaacggagctctggccgtgtggaaattggatgccagagggcgacttttagga
aatcacctcgtcaagcacgactacaacaaacctttaacctgctgcattttcaagcctgcc
tctcctggggtcgacgtggcgatgttggcgcgggcgtcggtgagcggagacgaatcggct
ctggacatgttcagctggaagggggcgcctctgaagatgggccctcaggagggactgggc
ttctatgtcagcaccgccaacggaaaggtccatgccgtggacgaacagggcagaacgagc
ccgctgctgagcgaggacggctccatcaggaagctcttctacctggacaagagaggcgtg
ctggtggtcgtcacggacaccctgatgctgtcgcagtacacactgagaccagaagggggc
gctcacgagtccatgaaggtgaagttgagcagcacagccgggcagaacgtcgacatcatc
tggactgagaacagcctcctgatcacagcgacaggagagccggtcgtcaaaatttgggac
ctggagagagatgagaactacgttctatctctggacgaaactctgggttttaagaaggga
gagatgatcaactgtgtttcctactgcgcagccaaagagatcctggcagctggaacctcc
aaaggccgcatagcgatgtggaagacggcgacacagccgatgagcagcagcagctacaga
gccgacgctaaagccctgtggaagctgcagactcccactgagatccacggaaacgtcacc
cagctgcagtggggctccaatcagaacctgctggccgccaacaactccagaacggttctg
atcctcagtgagcatgtgatgtcggcgcacttcggccagcaggtggcagcagtgcagctc
gccccgactcagctcagcatcacgaacttcagcagcggagagacgcttcctctgcagtgt
gacatgcatgtcagaggagtgtgcgttagcaaggactctgtgacggtctggaacgggaaa
cacatctctgtctatgagctctcaggcacggctctgcacgttacaggatcttttccttgt
gattcccacattgttgctgttcatgacgagaacctttacacggtggaaccaagccgagtc
cagatccgaacacctcaggggacagtgaagcagctgctgaccttctcccgggccgaggga
aaccccgtgctgctggacgtgtgccagtcgtacctggcagtaggaacagacacggcgcat
atcagagtttacgacctctccagacgagacgccaaagctcactgcggcgctaagaatctg
tccgaccacatcagcggcctcggcgccctgaggtccgtcaaatgcaacgccagcggcagc
caagttagcctgctagcctctcaggttaacggacgacccgatcataaagtatatttctac
gacattgagatggacaccgtgacacactttgacttcttcaccggcagaccgtcctctggc
gtctctgcgcctgatgaaagcgataagcaaaagtttcaggaaaatgaaatcagtggccgt
tttcctgtgtcccagtactgggatgagagcgaacctcgactctttgtctgcgagaccgcg
ccgatcgcctcggagaaatcagccaacgctttctcagatttggaggacgtgtcagtggtg
acgctcttctgtacgcaggaacacggactcctgctccaggactgcttctccaggccttca
ggccttcaggccctcctcgccctggatgtgccatactactacttcacctgcaagccaggt
gagcagaacccagaggtgtctccaccagatcagccaatcagagcggctcctgcttcgccc
cccctcatggcatccaggcgacctctcagagacttcgtgggcctggagaagtgcgagaag
ggaacgcgggacgccatgttgaacttcagcttctacctgagcgtgggcgacatggacgaa
gccttcaagtccatcaagctcatcaaaagtaaagcggtgtgggaaaacatggcacggatg
tgtgtgaaaacccgccggctggacgtggcccgaatgtgcctggggaacatggggaacgcc
agggcagcgaaagccgtgaaggaggcggaggctgagcccgaacccgaagcccaggtggcc
atgttggccattcagctcggcatgctggaagatgcagaaaagctgtacaagagctgtcat
cgctacgacctgctgaacgccttctaccaggcctccagcgaatggcagcgagctctggag
acggccgaggctcacgaccgcatccacctgcgcaccacctactacaactacgccaagtac
ctggagtccatgggccacaagaacctggcgcttgcttattatgagaaatcagacactcac
cgagtcgaggttcccagaatgctgcaggatgacacggcgtcgctggagttatacgtcacc
aaagccaaagataagaacatctacaagtggtgggcccaatacctggagagccagtccaac
atggagacagcgctgctgttctacgagcgcgctcaggattacctgtccctggtccgagtc
cactgctacctgggcaacatcccggaggcgtctcagatagccaacaacacaggtgacaga
gcagcatcgtaccacctggccagacattacgagggtcacgacgacatcaagcaggcggtc
cacttctacacccgggcccaggcctacaacaacgccatacgactctgcaaggagaacggt
ctggatgaccagctgatgaacctggcgctgctcagcaacccggaggacatgatggaggcg
gcctgccactacgaggagaagggcaaacacctggaccgggccgtggcgctctaccacaag
gccggttacgtctccaaagcgttggagttggcgttcgccaccgagcagtttgctgcgctg
cagctcatcgcggaggagctggatgaaaactccgacccggcgctcctcgctcgctgctcc
gacttcttcgtccaacattcccagtatgaaaaggcggtggagttactggcagcggccaag
aagtattctcaggcggtggagctgtgcctgacccataacctaacgatcaccgaggacctg
gctgagaggatgacggtgacggacgccaaggacctgacggaggaggccagcaaggccctg
ctggagaagatcgccgactgctgcatgagtcagggcagctaccacctggccaccaaggtg
tacacacaggccggcaacaagcacagggccatgaaggcgctgctgaagtcgggtgacacg
gataaaatcgctttctttgccaacgtttctcgtcagaaggagcttttcatcatggccgcc
aactacttccagtccctggactggcgcaaaaacccaaagaacctgaagcgaatcattgag
ttttacactaaaggcaaggcgccggacctgctgggcggcttctacgaggcttgtgctcag
gtggagatagatgattaccagaactatgaaaaggctctggatgctttgatggaggcgttt
aagtgtctgtccaaagcaaaggacggttcctctggacagcaggaagtgaggttagctgac
ctgcagcacaagatcgtcctcatcaagaagttcgtccacatacgcaggctgcacccagag
gacccggacgaggcagtcaggctgtgtgaagccctgctggaggaaccagagttggacccc
gccgtccggatcggagacgcgtacggcttcctgatcgatcatcactgtcagcagggacgc
ctgcaaacggcgtaccagaagctggaggagctgcagaagctgctgccgtctcagagcatc
aggttctacatcagccaggccagcctggacgcgctgcagaaggagatgggcttccctctg
gagagcggagaccacaaacacgtcctgcgggaggaggacgaggtggaggaggacctgacg
gtgtga

DBGET integrated database retrieval system