Poecilia mexicana (shortfin molly): 106929897
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Entry
106929897 CDS
T08022
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106929897 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmei03400
]
106929897 (rad54b)
DNA repair and recombination proteins [BR:
pmei03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
106929897 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Nodulin_C
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
106929897
NCBI-ProteinID:
XP_014862599
Ensembl:
ENSPMEG00000016873
UniProt:
A0A3B3XHK2
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MRRSGAPSQLLGNAVKKPRFVPLGGSASCPVAESKPLAPKLGLGNALDKVQRSLSAVVVN
KSTCSVQGQTGQAASGLSKVLARVLTATESKENEDETKNEVCAEDMNVSAGGVDGGLQWT
HASPQTPQPPADSPHVSGAAGPDGVRYFSVVWCKASKKKHKRWEGDAVLVARGRTVVLKD
MEGKDIGKGSGYKVSELASLSEGETLMIGGKEIEVMGIVSAEDFAKGRCFQEVQTDQEEL
HAKAAVPLPRRFNPKPFCPPTMLGRAGHPENKPQAEQTSKPRHDPLAPGALVMPRPSSNH
QWLHNKSGFPVVDVVVDPHLTTHLRPHQREGILFLYECVMGMRAAGRHGAILADEMGLGK
TLQSVALCWTLLKQGPYGGKPVAKRVLVVTPGSLVQNWKAEFTKWLGRERISVFTVDQDH
RIEEFLSSPLHSVLVISYEMLLRCLEPIQKVEFGLIICDEGHRLKNSSIKTSSALSSLSC
NRRVILTGTPVQNDLQEFYAIIEFVNPGILGSTTAYRKVYEEPILHSRQPSCSEDERVLG
EERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCTPSPLQQKLYKHLLCHRVFRACL
QGFTQGSAHLACITALKKLCNHPGLLHDTVKERTERGSVESSLYEGLADLFPESYCSAGF
DAADSGKLLVLSDLLSAIRQLSPSDRVVLVSNYTQTLDLLQDLCARSGYAFCRLDGQTPT
SQRQRLVDAFNSPYSQSFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWR
DGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKAAEHTSFSSSELRDLFSLT
DTPCLTHDLLSCSCSMDGSANDVEVEEAELVPDRPCQLGRQGDRRGAAQKHLSMSELMQW
RHFSGDTHTFSDPYLDHARSHITFAFQTTISHTPSEQ
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgctcaggagctcccagtcagcttttgggtaatgctgtgaaaaaacctcgcttt
gtgccactaggaggatctgcttcatgccctgtagcagaatcaaagcctctagcccctaag
cttggcttgggaaatgctctggataaagtccagagaagtctttcagcagtggttgtgaat
aaatcaacctgcagtgttcagggtcaaacaggtcaggctgcttcaggtttgtccaaagtg
ctggcccgtgttctcactgcaacagagagtaaagaaaatgaggacgagacaaaaaatgaa
gtctgtgcagaggacatgaatgtttctgcaggaggagtagatggaggcctccagtggacc
cacgcgtctcctcaaacccctcagcctcctgcagattcacctcatgtctctggagccgca
ggcccagacggagtccgatacttcagtgtggtttggtgtaaagccagcaagaagaaacac
aagcgctgggagggagacgccgtgctggttgccagagggcgaacagtcgtactcaaagac
atggaggggaaggatattggaaagggtagtggctacaaggtgtcagagctggcctcgctg
tctgagggagagacgctgatgattggagggaaggagatagaggtgatgggcatcgtctct
gctgaggactttgccaaaggtcgttgtttccaggaggttcaaactgatcaagaggagctg
cacgctaaggctgctgtgcctcttcctcgccgcttcaaccccaaacctttctgcccccca
acaatgttgggcagagcaggacatccagaaaataaaccacaagcggagcaaaccagcaaa
cctcgtcatgacccgctagctccaggtgccttagtgatgcctcgcccctcttccaaccac
cagtggcttcataacaagtcaggctttcctgtggtcgacgtcgtcgttgacccacacctg
accacgcacctgcgaccccaccagagggagggcatcctcttcctctacgagtgtgttatg
ggcatgagagctgcaggtcgtcacggcgccatcctggcggatgagatgggccttgggaag
acgctgcagagcgtggcgctctgctggacgttgcttaagcaaggaccttacggcgggaaa
ccagtcgcaaagcgtgtcctcgtggtcactcctggcagcctcgtgcagaactggaaagca
gagttcaccaaatggctcggccgggaacggatcagtgtcttcactgtggatcaggaccac
aggatagaagagtttttatcctcgcctctccacagcgttctggtgatcagctatgagatg
ctgctgcgctgcctggagccgatccagaaagtggagtttggtctcataatttgcgatgag
ggtcacagactgaagaacagcagcatcaaaacgtcctccgccctcagcagcctcagctgt
aatcgcagagtcatactcacagggaccccagtccaaaacgacctgcaggagttctacgcc
atcatagagtttgtgaacccgggaattcttggttcgaccactgcgtatagaaaagtttat
gaagaaccaattctacactccagacagccgtcctgctctgaggacgagagagttttgggg
gaagagcgcgctgctgaactctctcgtctcaccggcatgttcatcctgcgtcggacgcag
gagatcatcaaccgctacttgccgcctcgtctggactggaccttgttctgcacgccgtcg
ccgctgcagcagaagctgtacaaacacctgctctgccaccgcgtcttcagagcctgcctg
cagggcttcacacagggcagcgcacacctggcctgcatcactgcgctgaagaagctctgc
aaccatcctggcctgctccacgacaccgtcaaggagagaacagagcgcggatctgtggag
agctctttgtacgagggacttgcagatctcttcccagaatcctattgttcagcaggattc
gacgccgctgactctgggaaactcttagttctgtccgacctgctgagtgccatcagacag
ctcagcccttcagaccgggtggtcctggtgtcaaactacactcagactttggacttgctt
caggacctgtgcgctcgttccggctacgcgttctgccggctcgacggtcagacgcccacg
agccagaggcagcggctggtcgacgccttcaacagcccctactctcagagcttcctgttc
ctgctgagctccaaagcaggcggggtggggctgaatctgatcggagcgtcgcacctggtg
ctgtacgacatcgactggaaccccgccaacgacattcaggccatggctcgggtatggaga
gatggacagaaaaagacggtgcacatttaccgtctcctcactgcaggcaccatcgaggag
cgtatatttcagagacaggtgtccaaacaggggctgtcggggacggtggttgacttgggg
aaagcagccgaacacacgagcttctcttccagcgagctgcgagatcttttcagcctgacg
gacacgccgtgtttgacccatgacctgctgagctgcagctgcagcatggatggctcggcc
aacgacgtggaggtggaggaggcggagcttgttcccgacaggccatgccagctcggtcgt
cagggcgaccgcaggggggcggcgcagaagcatctcagcatgtcggagctcatgcagtgg
agacacttctccggggacacacacaccttctcagacccttacctcgatcacgcacgaagc
cacatcaccttcgccttccagaccaccatctcccacacacccagcgaacagtga
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integrated database retrieval system
