KEGG   Poecilia mexicana (shortfin molly): 106929990
Entry
106929990         CDS       T08022                                 
Name
(RefSeq) probable flap endonuclease 1 homolog isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei03030  DNA replication
pmei03410  Base excision repair
pmei03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106929990
   03410 Base excision repair
    106929990
   03450 Non-homologous end-joining
    106929990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmei03032]
    106929990
   03400 DNA repair and recombination proteins [BR:pmei03400]
    106929990
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmei04147]
    106929990
DNA replication proteins [BR:pmei03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    106929990
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     106929990
DNA repair and recombination proteins [BR:pmei03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     106929990
Exosome [BR:pmei04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106929990
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc XPG_I_2 HHH_5 RRXRR
Other DBs
NCBI-GeneID: 106929990
NCBI-ProteinID: XP_014862759
Ensembl: ENSPMEG00000003850
LinkDB
Position
Unknown
AA seq 356 aa
MGITKLADLIRSNAPNAVSYKDISDYTGKVIALDTSVVLNQFRAATPSLSPLTGLFFRTL
TFLEHDIKPVFVFDGKPPVEKTPVLERRAEAAGWSSPKRTGEASAQTKDSIELLKCMGVP
VIQDSAFQAPGDAEAQCARLVRHGVVDAVASEDMDTLPFGANVLIRQLNAKKNSEVVEYS
LPRLLEKLQITHEELVDLCILLGCDYCDKIPGLGPKKALTLIQKHRTIENVVLHINRETH
PVPLLWKYKEARKIFLDKTETPAPNLVWRELDEEAVVDFLCHTKHVREERIRHRMKTFHE
HRENRREERKKEKEARDGKGCIRQTRMDNFFRVTRKRGQPVESLSSLGDNKKKPRS
NT seq 1071 nt   +upstreamnt  +downstreamnt
atggggatcactaaactggctgatttaattcgttctaatgctccaaatgcagtttcttat
aaggatatcagtgactatacagggaaagtcatcgccttggatacctcagtggttctgaac
cagtttcgagcagcaacgccctctttgagccccctgactggactctttttccgcacactg
accttcctggaacacgacataaagccggtctttgtattcgatggaaagcctcccgtggaa
aagacacctgttctggagaggcgagccgaggcagctggttggagctcccccaaaagaaca
ggagaagcatcagcccagactaaggattccattgagctactgaaatgtatgggtgtgcct
gtcatccaggattctgcctttcaggctccaggggatgctgaagcgcagtgtgcccggctg
gtgagacatggggttgtggatgcagtggcctccgaggacatggacacactgccctttgga
gcgaacgttctcattcgtcagctgaatgctaagaagaacagtgaagttgtggaatactca
ttacccaggctgctggaaaaactgcagattactcatgaggagcttgttgacctttgtatt
ctgctgggctgtgactactgcgacaagatccccggtttaggtccaaagaaagctctgact
ctcatccagaagcatcgcactattgagaatgtggtgttgcacatcaacagagagacccat
cctgtacctcttttatggaaatacaaagaggccaggaagattttcttggacaaaacagaa
actccagctcctaacttggtgtggagggagctggacgaagaagccgtggtggacttcctg
tgtcacaccaaacatgtcagggaggagaggatccgtcatcgcatgaagacatttcatgaa
catcgagaaaataggcgagaggagaggaaaaaggagaaggaggcaagggacggcaaggga
tgtatcaggcagacgcgcatggacaacttcttcagagttaccagaaagagaggacagcca
gtagaatcactttcctcattaggtgacaacaaaaagaaacctagatcataa

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