Poecilia mexicana (shortfin molly): 106930259 Help Entry 106930259         CDS       T08022                                  Symbol col9a1 Name (RefSeq) collagen alpha-1(IX) chain   KO K08131   collagen type IX alpha Organism pmei  Poecilia mexicana (shortfin molly) Pathway pmei04510   Focal adhesion pmei04512   ECM-receptor interaction pmei04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pmei00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     106930259 (col9a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     106930259 (col9a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     106930259 (col9a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:pmei00535]     106930259 (col9a1) Proteoglycans [BR:pmei00535]  Extracellular matrix (ECM) proteoglycans   Others    106930259 (col9a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  106930259 NCBI-ProteinID:  XP_014863181 LinkDB All DBs Position Unknown AA seq 688 aa AA seqDB search MAVFRTHQEPLLVVLLQMVLICSAQRSAVGPRGPPGPPGIAGVPGVDGIDGERGEDSSVT GPVGLPGDNGKDGSSGAPGLPGADGPVGPPGDPGPLGPKGSKGEPGARGPAGEPGVGLDG TDGIPGTDGLPGELGKVGPPGVKGRRGAVGLPGPIGPRGPPAVYQGEELCPTACPAGLNG YSGLPGMKGHKGAKGESGEPGRQGHKGEEGDQGPPGEVGAQGLPGPGGARGLPGITGPKG DRGPRGKPGDVGPRGIQGAPGDPGQRGAIGESGQIGAQGDRGPQGIRGVPGPKGEPGLPG PDGREGIPGLPGSRGLPGKSGAPGDAGTQGLPGLPGTYGQKGQSGTKGNTGGPGVVGLMG SPGKQGERGDQGEVGPVGPRGGPGERGERGPDGPPGLPGGRGSKGDPGFPGLPGPAGFRG LKGDRGPVGLTGPKGDQGPSGAEGIPGERGELGDQGEPGEKGSLGPPGETGNKGPEGGRG LPGKEGKSGQPGPRGMQGDTGVPGLPGEQGKAGKPPTDRHIKQVCMRVMQEQLAQLAASL SRPESGIAGLPGPPGPPGPPGSPGENGFPGHSGSRGLPGLKGPPGLIGRKGPKGDQGDRG DRGPTLRGHKGEPGVPGLPGEPGRPAYGTNGRDGERGPRGVPGINGVPGPPGPAGRNGYC EPSQCVPPIVASPPVFGKNSETKGPSDD NT seq 2067 nt NT seq  +upstreamnt  +downstreamnt atggctgtcttcaggacccatcaggagcctctgctggtggttttactgcagatggtgttg atttgctcagctcagaggagcgcggttggccccagagggccccccggaccgccaggcatc gctggagtacctggagtcgacggaatcgatggtgagagaggggaagactcctctgtaact ggcccagtaggtcttcctggagataatggcaaagatgggtcttctggagctccaggcctt ccaggagcagatgggcctgtgggacccccgggggatccaggccctttgggcccaaaaggc tcaaaaggggaacctggagctcggggacctgctggagaaccgggagtaggacttgatggg actgatggtattcctggcacggatgggctaccaggtgaactgggaaaagtaggaccgcct ggagtgaaagggaggagaggtgccgttggtctgcctggtcctattggtcctcggggacct ccagctgtttaccagggtgaggagctgtgtcccactgcctgcccagcaggactgaatgga tattctggactcccagggatgaaaggccacaaaggggctaagggcgaatcaggtgagccc ggaagacaaggacacaagggagaggagggcgatcaaggaccgcctggtgaagttggagct caaggactgccaggcccgggtggagcaagaggccttccaggaataacgggccccaaagga gaccggggacctcgtggaaaacccggtgatgtcggtccgaggggaattcagggagcacca ggggatccaggtcaacgaggagcaataggggagagtggacaaataggagcgcagggggat cggggcccacaaggaatcaggggggtaccagggccaaaaggagaacctggccttccgggt ccagatggccgtgagggaatacctggactgcctggctcaaggggtcttccagggaaaagt ggcgctccgggtgacgcgggcacgcaggggcttcctggtttaccaggtacatacggccag aaaggacaaagcggcacaaagggtaacacgggaggcccaggagttgtgggactgatggga tctccagggaagcaaggggagcgaggagaccagggggaagtgggacctgtgggacccaga ggaggacctggtgaacgtggggagagaggacctgatggaccgccaggattacccggaggc aggggaagcaaaggggaccccggctttccaggacttcctggacctgccggtttccgaggc ctaaagggagacaggggtcctgttggtctcaccggccccaaaggagaccagggaccgtca ggtgctgaaggaataccaggagagagaggtgaactgggtgaccaaggagaaccaggagag aaaggatcgctcggtccaccaggagaaacaggaaacaaaggacctgaaggcggccgcggg ctgccgggcaaagagggcaagtcgggtcagccaggaccacgaggcatgcagggagacacc ggggtgccgggactacctggagagcaggggaaggcgggcaaaccaccaacagacaggcac atcaaacaggtctgcatgagagtaatgcaagagcagctggcccagttagcggccagcctg agcaggcctgagtcaggcatcgccggactccccggcccgcctggtccacctggcccaccg ggttcgcctggagagaacggattcccaggccactctgggtcgagaggactccccggtttg aagggcccacctgggctaatcggccgcaaaggaccaaaaggtgaccagggggacagaggg gacagagggcccacactgaggggccacaaaggggaaccaggagtccctggactaccaggt gaacccggaagaccggcttacggcacgaacggccgtgacggagagcgggggccgcgcggc gttcccggaatcaacggcgttccaggccctccgggtcccgctggcaggaatggctactgt gagccgtcgcagtgcgtccctcccattgtggcatcgccaccagtctttgggaaaaactcc gagacgaagggccccagcgatgactga

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