Poecilia mexicana (shortfin molly): 106930461
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Entry
106930461 CDS
T08022
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106930461 (btaf1)
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106930461 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TPR_Trm732_C
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
ARM_ECM29
Cnd1
Motif
Other DBs
NCBI-GeneID:
106930461
NCBI-ProteinID:
XP_014863506
LinkDB
All DBs
Position
Unknown
AA seq
1859 aa
AA seq
DB search
MIMAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLTYLRSPSWDT
RIAAGQAVEAIVKNIPEWNPAPKPKEESRDNLSPEDSSCDRLNFYHFDISRLLRHGASLL
GSAGAEFELQEDKTGEMDPKERLARQRKLLQKKLGLDMGAAIGMDTDELFNDEDLDYSCH
PSGFKAQGSRATAGCSSRNHVTIQAAELIDSEFRPGMSSRQKNKAKRLAKLVAKQKSRDV
DPNEKSNDSVEGEPEEKRRKTTNVVIDQPATEHKVLIDNVPDNSGLLEESHEWPLESFCE
ELCNDLFNPSWEVRHGAGTGLREILKSHGSGGGKLVGSTAEQMSRQHQEWIEDLVIRLLC
VFALDRFGDFVSDEVVAPVRETCAQTLGVALLHMSENSVAMTVDVLLKLLKEDQWEVRHG
GLLGIKYALAVRQDLISVLLPRVLPAITEGLQDLDDDVRAVAAAALIPVVEGLIQLLPNK
VPFIVNTLWDALLDLDDLTASTNSIMTLLSLLLTFPHVRQCSMEQSLTVLVPRVWPFLRH
TISSVRKAALETLFTLLSKADESCAIWINPILQDMLRHIFQSCILESNDEILELIQKVWM
ELLSQVPQQFVVAASCPWMGAWLCLMMQASHIPIDLNMLLEVKARSKDKTGAKARLGNNQ
VKETVQQYIAGAETVADDPLTRDYVVVRARLMAARLLGALCRCICDPQLNGASQEIRPAE
SLGQLLLFHLNSKSALQRIAVALVLCEWAALQKDCQIVSSMVQPRLLAVLTEQLYYDEIA
IPFTRMQNECKQLISLLAEVHIDLQDRLNSSVFTIDQANELVTTIFTETTAGLNVKSKQW
LALESKRQQAQSTVMETNTEWQQLHLRVHMFTACAAINLEVLPDKLNPLVRPLMETVKKE
ENTLIQSYAASFIAKLLQQCAVRSPCPNPKIIKNLCASACMDPSATPSSACPVPTAQEQA
KGGGLERDGMHHVVNKTQGIITLYRHQRAAFAITSKRGPTPKAPKAPVMELPPGSTISSD
NDESKKQFLVQRRGAEFALTTVAKHFGADLNRSLPYLWENTVGPLKAVAKENFCIDRQAQ
LERGDAAAQELVHSLQVLEVMAGAMAAELRPLLLEHLPHLFTCLQHPYTAVRHMAARCVG
VLSKIATLETMNSFLESVLHWLAAIDDCTKQEGAIEALACVMEQLDVDIVPYIVLLVVPV
LGRMSDPSDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIQQKARERQFLEQLLDGR
KLENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDQYL
RAQEYAKTKAADCSPLPSLVVCPPTLTGHWVDEVAKFCSKEFLNPLHYTGPPTERMRLQH
QVKKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAANFRVIL
SGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEA
LHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKASVEDSISAA
SSEEEEKPKLKATGHVFQALQYLRKLCNHPNLVLTPQHPEYKRITEQLACQNSNLRDIQH
APKLSALKQLLLDCGLGGGGGAEGGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPKLPTV
TYLRLDGSVPAGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMR
DLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVINQENTNLQSMGTD
QLLNLFTLDKDDKSDKGEQSSSTSGKASIKSVLDGLGELWDQQQYDSEYNLDSFMNSLH
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggctgtatcaagacttgaccgtttgtttatcttgctcgacactggaaccacc
ccagtaaccaggaaggcagcagcccagcagcttggagaagtggtgaaacttcacccacat
gaactcaacaacctcctgtcaaaggtgcttacctatctacggagtcccagctgggacact
cgaattgcagccggccaagctgtggaagccattgtgaaaaatattcctgagtggaacccg
gctccgaagccaaaggaagagtcccgtgacaacctgtctccggaggactcgtcctgtgac
cggttaaatttttaccattttgacatctcccgcctgctcaggcatggagcgtcgctgctc
ggatccgcaggagccgagtttgagctgcaggaagacaaaactggtgagatggatcctaag
gaacgtctggctcgtcagaggaagctgctccagaagaagctgggtctggacatgggagct
gcgataggaatggacacagacgagctgttcaacgacgaggacctggactattcctgccat
cccagcggctttaaagcccaaggatccagagctacagctggctgcagctcccgcaaccac
gtgactattcaagctgctgaattgatcgactcggagttccggcccggcatgagcagccgt
cagaaaaacaaagccaaaagattggctaaactcgtggcaaaacaaaaatccagagacgtg
gatcctaacgagaagagcaatgacagcgtagaaggtgaacctgaggagaaacggaggaaa
acgaccaacgtcgtaatcgaccagccggcaacagaacataaggtcttaattgacaacgtt
ccagacaactctggtcttttagaggagtcacacgagtggccgttggagagcttctgtgaa
gagctttgtaacgacctcttcaacccgtcgtgggaggttcgtcacggtgcgggcacaggc
ctcagagaaatcctgaagtctcacggttctggtggtgggaagctggttggaagcactgca
gaacagatgtcgcgacagcatcaggagtggatcgaggatctggtcatccggctcctctgt
gtgtttgctttggaccgctttggggactttgtatctgatgaggtggtggctccagtcaga
gagacgtgcgcccagacgctcggcgtcgctcttcttcacatgagtgaaaacagcgttgcc
atgacggtggacgtcctgctgaagctgctgaaggaggaccagtgggaggtccggcatgga
ggcctgttggggatcaaatatgccttggctgtccgacaggacctgatctccgtcctgctt
ccccgggtgctgcctgcgataaccgaaggtctgcaggacctggatgatgatgtcagggcg
gtggctgctgctgctctcatcccagtggtggaagggttgatccagctcctgcccaacaag
gttccttttattgtaaacacactatgggatgcactcctggacctggacgacctcaccgct
tccaccaacagcattatgacgctgctgtctttgctgctgacctttcctcacgtccggcag
tgcagcatggagcagtcactgactgtcctggttcctcgcgtctggccgtttttaagacac
accatatcatccgtaagaaaggcggcgctggaaacgcttttcacgctgctgtctaaagct
gacgagagttgtgcgatttggataaaccccattttacaagatatgttgcggcacatcttc
cagtcctgcatactggagagcaacgacgaaatactggagctcattcagaaggtgtggatg
gagctgctgtctcaggtcccccagcagttcgtggtggcagccagctgtccttggatgggc
gcctggctctgcctgatgatgcaggcctctcacatccccatagacctgaacatgctgctg
gaggtgaaggcccgctccaaggataagactggagcaaaggctcggctaggaaacaatcag
gtgaaggaaacggtccagcagtacatcgccggggctgagactgtagcagacgatccgttg
accagggattacgtggtggtccgtgccagactcatggccgccaggttgctgggagctctg
tgtaggtgcatctgtgaccctcagcttaacggcgcatcccaggagatccggccagccgag
tctttgggccagctgttgctcttccacctcaactccaaatcagccctgcaacggatagct
gtggctctggttctctgtgagtgggctgcactgcagaaggattgccagatagtgtcgtcc
atggtgcagccgcggcttctggccgtcctcaccgagcagctgtactacgacgagatcgcc
attcctttcacgcgcatgcagaacgaatgcaagcagctcatttcgttgcttgctgaagtt
cacatagaccttcaagatcgcctcaacagcagcgttttcaccatagaccaagccaacgaa
ctggttaccaccatcttcactgagacgacggcaggtctgaacgtgaagtccaagcagtgg
ctggcgctggagagcaaacgacagcaagcccagtctacggtgatggagaccaacacggag
tggcagcagctgcatctgcgcgtccacatgttcaccgcctgcgccgccatcaacctggaa
gtgcttcccgacaagctcaaccctctggtgcggccgctcatggagacggtcaagaaggag
gagaacaccctgatccagagttacgccgcttcgttcatagccaagctgctgcagcagtgc
gccgtacgctcgccgtgccccaacccaaagatcatcaaaaacctctgcgcttcggcgtgc
atggacccctcggccacgccctcgtccgcttgtcccgtacccacagcgcaggaacaggct
aaaggaggtgggctggaaagagatggcatgcatcacgtagtgaacaaaacccagggcatc
atcactctgtaccgccaccaacgggccgcgtttgcaattacaagcaaaagaggtccgaca
ccgaaggcgccaaaagccccggtgatggagcttcctcctggcagcacgataagctccgat
aacgacgagagcaagaagcagtttcttgttcaaagacggggagcggagtttgccctaacg
accgttgctaagcactttggtgcggacctcaacaggagtctgccgtacctctgggaaaac
acggtgggaccgttgaaggcggtcgccaaggagaacttctgcatcgacaggcaggcccag
ctggagagaggcgatgcggcagctcaggaattggtccactctctgcaagttctggaagtc
atggctggagccatggcggccgaacttcgacctttgttactggaacacctacctcatttg
tttacatgcctgcagcacccgtacacggcggtgcggcacatggccgcgcgctgcgtgggc
gtgctcagtaagatagccacactggagaccatgaacagtttcctggagtctgtgctccac
tggttagctgctatcgacgactgcacgaagcaggagggcgccatcgaagcgctggcttgt
gtgatggagcagctggacgtcgacatcgttccctacatcgtgctgctggtcgttcccgtt
ctgggccgcatgagcgaccccagtgacagcattcgttttatggccactcagtgcttcgct
acgttaatccgcctgctgcctctagaggcaggaataccagacccgccggccatgtcggcc
gacttgatccagcagaaagcgagagagcgtcagtttctggagcagctgctggatggcagg
aagttggagaactataagatccccgtgccgattaaagccgagctcaggaagtaccagcag
gatggtgtgaactggctggcgttcctgaacaaatacaagctgcacgggatcctctgtgac
gatatgggcctggggaagacactgcagtccatctgcattctggcaggagatcagtacctc
agggctcaggaatatgcgaagaccaaggcagcagactgcagccccctgccctcgctggtg
gtgtgtccgcccacgctgacgggccactgggtggacgaagtggccaagttctgctccaaa
gagttcctcaacccgctgcactacaccgggccccccacggagcgaatgcggttgcagcat
caagtgaaaaaacacaacctggtagtcgcttcctatgatgtcgtgcggaacgacatcgac
ttttttagaaatataaaatttaattactgcatcctggatgagggtcatgtgatcaagaat
gggaaaaccaaactgtccaaagccatcaagcagctggcggccaacttcagggtcatcctg
tcgggaacgcccatccagaacaacgtcctggagctctggtcgctcttcgacttcctgatg
cccggcttcctgggaacagaacgccagttcgccgctcgctacgggaaacccatcctggcc
agccgtgacgccaagagctcgtccagagaacaggaagctggcgtcctcgccatggaggct
cttcatcggcaggtcctgccgttccttctgaggaggatgaaggaggatgtgctccaagac
cttcctcctaaaataatccaggactattactgcactctcagccctctgcaggttcagctc
tacgaagactttgcaaagtctcgagccaaggccagcgtggaggacagcatctctgcagcc
tccagtgaggaagaggagaagcccaagctgaaggccacgggtcacgtcttccaggcgctg
cagtacctgcggaagctctgcaaccacccgaacctggttctgacgccgcagcatccggag
tacaaacgcatcacggagcagctggcgtgtcagaactccaacctgcgcgacattcagcac
gcgccgaagctctctgctctcaaacagctgctgctggattgtggtcttggtggcggcgga
ggagcggaaggcgggacggaggcggtggtggcgcagcatcgcgtcctcatcttctgtcag
ctgaagagcatgctggacatcgtggagcacgacctgctgaagcccaaactgcccaccgtc
acctacctgcggctggacggcagcgtaccggccggccagcgccactccatcgtctccagg
tttaacaacgatccctccattgatgtgctgctgctcaccacccatgtcggtggtctgggt
ttgaacctcaccggcgcagacactgtggtgtttgtggagcacgactggaaccccatgagg
gacctgcaggccatggaccgcgcccatagaataggacagaaacgggtggtgaacgtttac
aggttgatcactcgaggcacgctggaggagaagatcatgggactgcagaaattcaagatg
agcatcgccaacaccgtcatcaaccaggagaacaccaacctgcagagcatgggcacagac
cagctgctcaacctcttcactctggacaaggatgacaagagtgacaaaggcgagcagtcg
tcatcgacctcaggaaaggcgtccataaagtcggtgttggacggacttggggagctgtgg
gaccagcagcagtacgactcggagtacaacctggacagcttcatgaactcattgcactag
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integrated database retrieval system
