Poecilia mexicana (shortfin molly): 106930612
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Entry
106930612 CDS
T08022
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106930612 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmei01009
]
106930612 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106930612 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
pmei03029
]
106930612 (rb1cc1)
Protein phosphatases and associated proteins [BR:
pmei01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106930612 (rb1cc1)
Membrane trafficking [BR:
pmei04131
]
Autophagy
Autophagosome formation proteins
ULK complex
106930612 (rb1cc1)
Mitochondrial biogenesis [BR:
pmei03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106930612 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
106930612
NCBI-ProteinID:
XP_014863747
Ensembl:
ENSPMEG00000003045
UniProt:
A0A3B3WHG9
LinkDB
All DBs
Position
Unknown
AA seq
1616 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAVQHQVLVVNGGECMAADRRVC
SYSAGTETNPIFLFNKEMILSDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLEDCTLSYQKLLIKFNTAYTNYQQ
DLEEIKIKLSKLGTSVSVMARIPLLECLTRHSYRESIEKSSSTPEKDSDETEEEKSTDSV
LCATQTQVASKSSASLSASGGGTCEPAGDQETSEMTESGGLRAALLDDDTPELACQSSFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLADCRDTIAKLDNQNMKSIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELIERVRV
VDALSTVPQMYCLAVVEVVRRKMFMRHYREWANALVKDGKRLYEAEKFKRESFGKLFRKS
FLRNRLFRGLESWPPTSFCTRKPRRFDDELPDISLDDLQYLKSCCPVEVQPFLMIPAMCD
FEPLNRHVETLHKLVQAAQSVDEMSQTITDLLSEQRASCSQSAQRSTAQTPQSEGKPGTT
TPVPSKTPLCLSLQGSSCQPLLVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGS
LDLDSLAESPESDFMSAVNEFVIEENLTSPNPISDPTSPEMMVESLYSSVINAIDSKRMQ
DTTTLEKENSRIADLKEVLEKYRCAAEESHSNLRSVKADLYYLRGFVLKEQQDFGLALRS
MTMEVRSTVNEIYQCQKTELNEQHEGELLTARQELENQVQALTEENKVNQNIVRDVQRAM
LELEGLMERKEKELTQLENEKERWVEKERHFAEKIKHLEQINCDQTEEIKMLLTSKDSLS
SQLENLHFEIERSQQKIRQELEEVSQCHLKELEEKLMQEHQKALDSLNKNNKEALEHLAV
ENSTKLTKAADHHDTAIKEKDVQIKEMEDRLTELTELRCRLEVDLALKESETEEVRILFE
EAKMQQAEAVKTQVEADTKVLKDELMDLKRQLQAKNEEYEVDLAELRTLMRIEKDHCISE
LVDRHEEQTILLHGKISALQQHSQDAERNHAEQQQRLREELDQQRAALAEDKEKQFRSFQ
EREQQLRTVVNSLQAENDLLSKNLEQERRAAQEEEASSVVAANAFKELEQQKEETERRLL
EKIRQLENELHEKQSSKSDEGLSLHAEGRADAGAPLSLDSALQERLQQETASLQAQIELL
EKKKNEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQIINDLSEKLQKVTQQQEKDKALIE
TLSEDRASVMQEKKQLEEELNRLRSSALVSSAFFPSNSAQELSEAGAAARALPVAGACSP
ETSAETDRLASVTAFRDDEHVDSAVEASMVASDDTVMSEEKQRIMLLERTLHMKEEENKR
LSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSESL
TALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNRKV
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtatgtgttccaggtcaacaatggaagcactttgacttttgacaccgacctt
gctgtccaaactgtactagagcttaaacatgccatccaagccaaatacaaaatcgcagtt
cagcatcaggtcctcgttgtcaatggaggggaatgtatggctgcagacagacgggtctgc
agttacagtgctggcactgaaaccaaccccatattcctgttcaacaaagagatgatcttg
tccgaccgggatccaaccatcccaaaaaccaccttttccattgagagtgagattcaggtt
aaggtggaagagtcgctactgatgccagctgtctttcacaccgttgcctcacgaacacaa
cttgctctggaaatgttcgaagttgccaaaaaactttgctcgttctgtgaacgtttggtt
cacgatgagcatctccaacatcaaggctgggcagctatcatggctaatctggaggactgc
actttgtcttatcagaagttactcataaagttcaacaccgcatacacaaattatcaacag
gacttggaagaaattaaaatcaaactttcaaagttagggacttcggtttctgtgatggcc
aggattcctctgctcgaatgtttgacaagacacagttacagagagagcatcgagaagtcc
agttcgaccccggagaaggactcggatgagacggaagaagaaaaatccaccgactctgtg
ctctgcgctactcaaacccaggtggcctccaaatcgtcagcgtccttatctgcttcaggg
ggaggcacgtgcgagccagcaggcgaccaggagacaagcgaaatgactgagagtggtggt
ttgagagctgcacttttagacgatgacactccagaactcgcctgccagtcttctttcaac
gtaacactattggactggatcaacgtgcaagacagacctaacgatgtggaatccgttgtc
aggaaatgctttgactccatcaacaggctcgaccctcggatcatccagcccttcctggca
gattgtcgtgacacaattgcaaagctcgataatcagaacatgaaatccatcaaagggctt
gaagacaggctgtacgctctagaccaaatgattgcaagctgtaagaagctggtgaatgag
cagaaagaacttgctcaggggtttttggccaatcagaagcgagctgaaaacctgaaggat
acgtccgtcctgcctgacctgtgtctgagtcacaccaaccagctgatgatcatgctgaac
aaccacaggaagctgctagacatcaagaagaagtgcaccactgccaaacaagagctagca
aacaaccttcaagtcagactcaaatggtgctgctacgtgatgcttcacgcagatcaggac
ggggagaagcttcaggctcttcttcggctcctgacagagctaatagagagagtgagggtg
gtggacgccctcagtacggtgccccagatgtactgcttggcagtggtggaagttgtcagg
aggaaaatgtttatgcgacactacagagagtgggccaatgcacttgttaaggacgggaag
cgactgtatgaggcggaaaagttcaaaagggaatcctttggaaaacttttcaggaagtct
tttctccgaaatcgattgtttagaggacttgagtcttggcctccaacttcattttgtaca
cggaaacccagaaggtttgatgatgaacttccagacatctcgcttgatgacctgcagtac
ttgaaatcgtgttgtcctgttgaggtgcagcctttcctaatgattcccgccatgtgtgac
tttgagcccctaaatcgccacgtagagacacttcataagctggtccaagccgcacagagc
gtggacgaaatgtctcaaactatcacagacctgctgagtgaacaaagagcatcctgtagt
cagagcgcccaaagatcaacggcgcaaactccgcagtctgagggcaagcccgggaccacc
acgccggtgccctccaaaacgcctctctgtcttagccttcagggatccagctgtcagccc
ctgcttgtacccgtcccggctcctttagaggatctgtccccagacagcatcgatgcgcaa
acatttgacttcgaaaccatcggccacccgaacatggaccccgtcctgcagcagggatcc
ctggacttggattctctcgccgagagccccgaatccgacttcatgtctgctgtcaacgag
tttgtgatcgaggagaacctgacctcccccaaccccatcagcgaccccactagccccgaa
atgatggtggagtcgctgtactcctcagtcattaacgccatcgacagcaagcggatgcag
gacaccacaacgctggagaaggaaaactcaaggatcgccgacctcaaggaagttctggag
aaatacagatgtgccgcagaagagtcccactccaacctcaggagtgtgaaggctgacctc
tattacttaagaggtttcgtcttgaaggaacagcaggactttgggttagctctgcgcagc
atgaccatggaagtgcgcagtaccgtgaacgaaatctaccagtgtcagaagacggagttg
aacgagcagcatgaaggggagcttctcaccgctcggcaggagctggagaaccaggttcag
gcgttgacggaagaaaacaaagtaaaccagaatattgtcagagacgtccagagagccatg
ctggagctggaggggctcatggagcgcaaagagaaagaacttacccagctggagaacgag
aaagagcgatgggtggaaaaagagagacactttgctgaaaagataaaacatcttgagcag
atcaactgtgatcaaacagaagaaatcaagatgctccttacttctaaagactctttgagc
agtcagcttgaaaacctgcattttgagatcgaacgcagtcagcagaagatccgacaggag
ctggaggaggtttctcagtgccatttaaaggagttggaggaaaaactgatgcaggaacac
caaaaggctctggacagtctgaataagaacaacaaggaggccctggaacatcttgctgtt
gaaaatagtacaaagctgaccaaggcagccgatcaccacgacaccgctattaaagagaag
gatgttcagattaaagaaatggaagatcggcttacggagctcacagaactccgctgtaga
ctggaggtagatctggccctcaaagagtccgagacggaggaggtgaggatcttatttgaa
gaagccaagatgcagcaggcggaagctgtaaagacccaagtggaggcagacaccaaagtc
cttaaagatgagctgatggatctcaagaggcagcttcaagctaagaacgaggagtacgaa
gtggatctggcagagctgaggactctcatgaggatcgaaaaggaccactgcatctcggag
ctggtggaccggcacgaggagcagacgatcctgttgcacggcaaaatctccgccctgcag
cagcactcccaggatgcggagagaaaccacgcggagcagcagcagaggcttagagaggaa
ttggatcagcagcgggcggctctggctgaagacaaggagaagcagttcaggagtttccag
gagcgggagcagcagttgaggacagttgtcaacagtttgcaggcagaaaatgatctgctc
tctaaaaacctagagcaggaaagacgtgcagctcaggaggaggaggcgtcgagcgtcgta
gcagcaaatgctttcaaggagttagagcagcagaaggaggagacggagaggagactttta
gaaaagattaggcaacttgagaatgagcttcatgagaaacagtcgtctaaaagtgatgaa
ggcttgtcgctgcacgctgagggccgtgcagatgctggagcacctctgtccctagactca
gccttacaggagcgcctgcagcaggagacggcctctctgcaggcccagattgagctcttg
gagaagaagaagaatgaagagatacagaacctcaaaacatcactgattgcagagcagcag
acgaacttcaacaccgttctaacaagagagaagttgaagaaagagcagattatcaacgac
ctttcggagaagttacaaaaagttacccagcagcaggaaaaagacaaagctctgatagag
acgctgtctgaggaccgagcgagtgtgatgcaggagaaaaagcaattggaggaagagctg
aaccgtctgcgcagctctgctctggtctcctctgccttcttcccctcgaactcggctcaa
gagctctcagaagctggagcagcggcgagggctctgcctgttgcgggggcttgctctcct
gagacctcggccgaaacggaccgactggcctccgtaacggccttcagagatgacgagcac
gtcgattcagccgtggaagccagcatggtggcttctgatgacactgtgatgtcagaagag
aaacagcggataatgttacttgagaggactttgcacatgaaggaagaagaaaacaagcgc
ctcagccagcgactgatgtctcaaagcatgtcctccgtgtcatcacggcattcagacaaa
attgccatcagagatttccaggtcggcgatttggttctaatcatcctggatgaaaggcac
gacaactacgtgctgttcacagttggtcccaccctctacttcctgcactcagagtctctc
actgcactggaccttaaaccagcatcagggacctcaagacgaccatgggtgcttggaaaa
gtgatggagaaggaatattgtcaggcaaagaaggcccagaacagattcaaagttccttta
ggaaccaagttctacagagtgaaagctgttccatggaatagaaaagtctaa
DBGET
integrated database retrieval system
