Poecilia mexicana (shortfin molly): 106930924 Help Entry 106930924         CDS       T08022                                  Symbol htt Name (RefSeq) huntingtin isoform X1   KO K04533   huntingtin Organism pmei  Poecilia mexicana (shortfin molly) Brite KEGG Orthology (KO) [BR:pmei00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pmei03019]     106930924 (htt)    04131 Membrane trafficking [BR:pmei04131]     106930924 (htt)    03029 Mitochondrial biogenesis [BR:pmei03029]     106930924 (htt) Messenger RNA biogenesis [BR:pmei03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      106930924 (htt) Membrane trafficking [BR:pmei04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     106930924 (htt) Mitochondrial biogenesis [BR:pmei03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     106930924 (htt) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT HEAT_ECM29 HEAT_EF3_N GNC1_N Motif Other DBs NCBI-GeneID:  106930924 NCBI-ProteinID:  XP_014864270 Ensembl:  ENSPMEG00000006477 LinkDB All DBs Position Unknown AA seq 3078 aa AA seqDB search MEMFLLCSDDSESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIKKNGASRSLRAALW RFAELAHLIRPQKCRPYLVNLLPCLSRITKRQEETVQETLAAAIPKIMSALGNFANDGEI KVLLKSFVANLKSSSPTIRRTAASCAVSVCQHSRRTSYFYTWLLNVLLGLLLPVDDEHPS HLILGVLLTFRYLMPLLQHQVNTSSLKGSFGVMRKEADVQPTPEQLLQVYELTLHYTQHW DHNVVTAALELLQQMFRTPPPELLHVLITAGSIPHATVFRQDTESRARSGSILELIAGGG SSCSPLLLRKQRGKILSGEEDGLEDDPERAEVNAGAFTDGSSAAQVDIITEQPRSSQHTL QPGDSVDLSASSEQGGGGGTSASGTPESPNENEEEMLSRSSSGANVTPETADYTTPENAT PEGGGPLGEGGMALGTNDRSLPPSDSSQTTTEGPDSAVTPSDVAELVLDGSESQYSGMQI GTLQDEEDEGAAPSSQEEPSEPFLQSALALSKPHLFDGRGHNRQGSDSSVDRFIPKDEPA EPEPDNKPSRIKGPIGHYTDQGAEPLVHCVRLLAASFLLTGQKNGLIPDKEVRVSVKALA VSCVGAAAALHPEAFFNSLYLEPLDGVPVAGQQYISDVLGLIEHGDPQIRGATAILCGAI ILAALTKTRYNIHTWLAGVQSTTGNPLSLVDLVPLLQKTLKDESSVTCKMACAAVRHCIM TLCSSTLSELGLQLVIDLFALRDSSYWLVRTELLETLSELDFRLINFLERKTETLHKGDH HFTGQLRIQDRVLNDVVIYLLGDDDPRVRHVAASAVSRLVPRLFFDCDQGQVDPVVAIAR DQSSVYLQLLMHETQPPSQFTVSTITRTYRGYNFSNSVSDVSLENNLSRVVTAVSHAFTS STSRALTFGCCEALCLLASNFPVGTWSTGWHCGYVGSSSNFSSRSSLNRSRGRTLSLSQS ANAPASSAASSSALDSERKTLTVGPANMVLSLLSSAWFPLDLSAHQDALLLCGNLLAAVA PKCLRNPWAGEEEGSTGNTGAGPNKTEEPWTALSERSLVAMVEQLFSHLLKVLNICAHVL DDTPPGPAAKAALPSLSNTPSLSPIRRKGKEKETTEATAAPMSPKKSNEINTGRQADSTT SAAVNKSITLGSFYHLPPYLKLYDVLKATHANFKVTLDLYSSQEKFGGFLHAALDVLSQL LELATLHDIGKCVEEILGYLKSCFSREPTMATVCVQQLLKTLFGTNLASQYESVLSGPSR SQGKALRLGSSSLRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEQDTSGWFDVMQKA SNQLRSNIANATRHRGDKNAIHNHIRLFEPLVIKALKQYTTSTSVALQRQVLDLLAQLVQ LRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIIPNIFFFLVLLSYERYHSKQIISI PKIIQLCDGIMASGRKAVTHAIPALQPIVYDLFVLRGSNKADAGKELDTQKEVVVSMLLR LVQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMIAKQQMLLDSPEALGVLNTL FETVAPSSLRPVDMLLKSMFTIPVTMASVTTVQLWVSGILAVLRVLVSQSTEDIVLSRVH ELSLSPHLLSCHTIRRLHQQNPSPSNLPAADASCDLEAGEDAQKVPPEETFARFMLQLVG VLLDDISSRRVKVDITEQQHTFYCQQLGTLLMCFIHIFKSGMFRRITTAASRLLKGEGGG QPGPEAGLYYPLEGLNSMVQSLVTTHPPLVLLWCQVLLIINYTNYSWWAEVHQTPRGHSL SCTKLLSPHSSGEGQEEEKPESRLAMVNREIVRRGALILFCDYVCQNLHDSEHLTWLIVN HVRDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCDNLPTPTMLKKTLQCLEGIHL SQSGSLLMLYVDKLLNTPFRVLARMVDTLACRRVEMLLAETLQNSIAQLPVEELERIQEY LQTSGLAQRHQRFYSLLDRFRATVADTSSPAPPVTSHPLDGDPPIAPEKVVADKEWYVAL VKSQCCLHGDVFLLETTELLTKLPAADLFSVMSCKDFNLSLLCPCLGLGVQRLTRGQGSL LLETALQVTLNQLEEVTGSLPAPHQSFLPPPHPQPYWNQLGDVYDEPGFYPRVLALCRAL SQYLLSVNQLPSSLHIPSDKEHLIASFTCMAAEVVAWRLLQDQLPLSVDLQWALSCLCLA LQQPCVWNKLSTLEYKTYTCSLIYCLHLTIAAVAVHPGDRLLHPEKKKSRGEKNGEDQLD SALLNIQCEWQACEIMAELVEGLQSILSLGHPRNRAFPVFLTPTLRNIIISISRLPLVNS YTRVPPLVWKLGWSPQPGGEFGTTLPEIPVDFLQEKDVFREFLYRINTLGWSSRTQFEET WATLLGVLVTQPITMDQEEETQQEEDLERTQLNVLAVQAITSLVLSAMTLPTAGNPAVSC LEQQPRNKSLKALETRFGRKLAVIRGEVEREIQALVSKRDNVGTHHPYHAWDPVPSLSAA SAGTLISHEKLLLQINTERELGNMDYKLGQVSIHSVWLGNNITPLREEEWGEDEEDEADT PAPTSPPLSPINSRKHRAGVDIHSCSQFLLELYSQWLILGSPSNRRTPTILISEVVRSLL AVSDLFTERNQFDMMFSTLMELQKLHPPEDEILNQYLVPAICKAAAVLGMDKAIAEPVCR LLETTLRSTHLPSRMGALHGVLYVLECDLLDDTAKQLVPTVSEYLLSNLKAIAHCVNLHN QQHVLVMCAVAFYMMENYPLDVGAEFMAAVIQLCGVMVSASEDSTPSIIYHCVLRGLERL LLSEQLSRVDGEALVKLSVDRVNMSSPHRAMAALGLMLTCMYTGKEKASPASRPAHSDPQ APDSESVIVAMERVSVLFDRIRKGLPSEARVVSRILPQFLDDFFPPQDVMNKVIGEFLSN QQPYPQFMATVVYKVFQTLHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSAS TSQWISALLPHVISRMGSSETVDVNLFCLVAMDFYRHQIDEELDRRAFQSVFETVASPGS PYHQLLACLQSIHQEASL NT seq 9237 nt NT seq  +upstreamnt  +downstreamnt atggagatgtttcttctctgcagcgatgacagtgaatcagatgtccgtatggtggctgat gagtgcctgaacaaaatcatcaaagctctgatggactcgaacttgcctagactgcagctg gagttgtacaaagaaattaaaaagaacggtgcctcacggagtctgagggcagctttgtgg aggtttgctgagctagcccacctcatccgaccccagaaatgcagaccttacctggtcaac ctgctgccatgcctcagtcggatcaccaagcgtcaggaggaaaccgtgcaggagacgctg gctgcagcgatacccaaaatcatgtcagccttgggaaacttcgccaacgacggcgagatt aaggtgctgctgaagtcatttgttgccaacctgaagtccagctcccccaccatcagacgg acagcagccagctgcgccgtcagcgtgtgccaacactccagacgcacaagttatttctac acctggctccttaatgtgctgctgggcctgttgcttccagtcgatgacgaacacccgagt catcttatcctgggggtgctgctaacgtttcgctacctgatgcccctgctgcagcaccaa gtcaacaccagcagcctcaaagggagctttggagtgatgaggaaggaggccgacgtccag ccaacacccgagcaactcctgcaggtgtacgagctgacgctgcactacacgcagcactgg gatcacaacgtggtcacagccgccctggaactcctgcagcagatgttcaggactcccccg ccggagcttctgcacgtgctcatcacggccggcagcattcctcacgccaccgtgtttcgt caggacacggagagccgcgctcgctcgggcagcatcctggagctcatcgcggggggaggg tcttcctgcagtccacttcttctcaggaaacagagaggtaaaattctctctggagaagag gatgggttggaggacgaccccgagagagcagaagtcaacgcgggagccttcacagacggc tcgtctgctgctcaggtggacatcatcacagagcagccgcgctcttcgcagcacacgctg cagcccggcgactctgtggacctcagcgcctcctccgagcagggcggcggaggcggcacg tccgcatcaggcacccccgagtcacccaatgaaaacgaagaggaaatgctgagtcgaagt tccagcggcgccaacgtcaccccggagacagccgactacaccacaccagaaaacgccacc ccagaaggcggggggccgctcggcgaaggcgggatggcgctgggcactaatgatcgatcg ctcccaccaagcgactcatctcagacgaccacagagggaccggattcggccgtgacgcct tcggatgtagcagaactggtcctggacggcagcgagagccagtactccggcatgcagata ggaacgctacaggatgaagaagacgaaggagcagcgccttcctcccaggaagaaccctca gagccgtttctgcagtcggccctcgctctgagtaagcctcatctgttcgatggccgaggt cacaatcgtcagggttcggacagcagcgtggaccgcttcattcccaaggatgagcctgct gaacccgaacctgataataagccgtcacggataaagggtccaattggacactacacggac cagggggcggagccactggttcactgtgtgcgacttctcgccgcttcttttcttctcact ggacagaagaacggattgattcctgataaagaggttcgagtgagcgtgaaggcgttggcg gtcagctgcgtcggagctgcagcagcgctgcatcctgaagcgttctttaattctctctac ctggagccactggatggcgtcccagttgcagggcagcagtacattagtgacgttctgggc ctcatcgaacacggagacccccagatcagaggggccacagccatcctctgtggagccatc atcctagctgcgcttaccaaaacacgttacaatattcacacctggctggccggtgtgcag agtacaacaggtaaccctctgtccctggtggatttggtgcctttgctccagaaaacttta aaagacgaatcctcggtcacctgcaagatggcgtgtgctgcagtcaggcactgcatcatg acgctgtgcagcagcacgctgagcgagctcggattgcagctggtgatagacctcttcgct ctgcgggattcttcctactggcttgttcgcaccgagctcctggaaactctgtccgagtta gacttcagattaattaatttcttggagagaaaaactgaaactttgcacaaaggagaccat cactttactgggcaactacggattcaggacagggtcctgaatgatgtggtcatctatctg ttgggagacgatgatccgagagttcgacacgttgcagcctctgctgttagcagactcgtt ccaagattgttctttgactgtgaccaaggccaggtagacccagtggtggcgatcgcccgg gaccagagttcagtctacctgcagctactcatgcatgagacacaacccccgtcccagttc acagtcagcacaatcacaaggacgtatcgaggctacaacttttctaactctgtgtccgac gtctcgttggagaacaacctgtccagagttgttactgcagtctcccatgctttcacatct tccacctccagagcgctaactttcggctgctgcgaggctttgtgtcttctagcatcaaac tttcctgtcggtacctggagtacaggctggcactgtggctatgttggctcgagcagcaac ttttcttctcgttctagtctcaaccgcagcagaggcaggacactcagtttgtctcagagc gccaacgctccagcctcttcggccgcctcctcgtctgcgctggattctgagcggaagacg ctgaccgtgggaccggccaacatggtgctctccctgctgtcttctgcgtggtttcctctg gatctctctgcacaccaagatgcactactgctctgtgggaacctgcttgcggctgtggct ccaaaatgcttacgcaacccctgggctggagaggaggaaggaagcactgggaacactggt gcaggcccaaataaaacagaggaaccctggacagccctgtcagagcgctccctggtggcc atggtggaacagctgttttctcatctgctaaaggttctcaacatctgtgcgcacgttctg gatgacacgccgccgggaccagcagctaaggctgctctcccctctctgagcaacacgccg tccctgagtcccatccgcaggaaagggaaggagaaggagacgaccgaggccactgctgca cccatgagcccaaagaagagcaacgagatcaacacaggcaggcaagcagacagcaccact tcagcagctgtgaacaaatccatcaccctgggcagcttctaccacctgcctccctacctc aagctctacgacgtcctcaaagcgacacacgccaactttaaggtgacgttggatctctac agcagccaggagaagtttggaggttttctgcacgctgccttggatgttttgtcccagctg ctggagctggccacgctgcatgacatcggaaagtgtgtagaggaaattctgggctacctg aagtcctgtttctccagagaaccgaccatggccactgtttgtgtgcagcagctgttgaag acgctgttcgggaccaacctggcttcccagtatgaaagtgtgctgagcggacccagccgc tcccagggcaaagccctgcgcctcggctcgtccagcctgcgcccgggcctctaccactac tgcttcatggctccgtacacacacttcacccaggctctggctgatgccagcctccgtaac atggtgcaggctgagcaggagcaggatacctcgggatggtttgatgttatgcaaaaagca tccaatcagctgagatccaacatcgccaacgctacacgtcacagaggagacaagaatgct attcacaaccacatccgtctgtttgagccgcttgtgatcaaagctttgaagcagtacacc accagtacctctgtggccctgcagagacaggttctggacctgctggcccagcttgtgcag ctcagagtcaattactgcctgctggactcggatcaggttttcataggctttgtcctgaag cagtttgaatatatcgaagtgggccagttcagggattctgaagccatcatcccaaacatc tttttcttcctggttttgctgtcttacgaacgttaccactccaagcagattatcagcatc cccaagatcatccagctgtgcgacggcatcatggcgagcggcaggaaagcggtcacccac gccattcccgccttgcagcctatagtttatgatctttttgtgctgagaggttcaaacaaa gcagatgcaggcaaagagctggacactcagaaggaagtggtggtgtccatgcttctcaga ctcgtgcagtaccatcaggtgttggagatgttcattctcgttctgcagcagtgtcacaaa gagaatgaggacaagtggaagagactgtccaggcagatcgcagatgttattcttcctatg attgcaaagcagcagatgctgctggactctccagaggcgttaggagtgttgaacaccttg tttgagactgtggccccctcctctctcagaccagtcgacatgctgctgaagagcatgttc actatccccgtcaccatggcatctgtcactacagtccagctgtgggtgtctgggatcctg gcggtgctcagagtactcgtgtcgcagtccaccgaggacatcgtcttgtctcgggtccac gagctgtccctctccccgcacctcctctcctgccacacgattcgccgcctgcatcagcag aacccgtcccccagcaacctgcccgccgccgacgccagctgtgacctggaagccggcgaa gacgcgcagaaggttccacctgaagaaacctttgcaaggttcatgctacagctggtcgga gttttgcttgacgatatttctagcagacgggtcaaagtggacattacggagcaacagcac accttctactgccagcagctgggaacgctgctcatgtgtttcattcatatttttaaaagc ggaatgtttcgcaggatcacgactgcagccagtcggctcctgaagggcgagggcggcggg cagccgggtccggaggccggcctctactaccctttagaggggctgaacagcatggtgcag agcctcgtcaccacccacccgccattggtgctgctgtggtgccaggtccttctcatcatt aactacactaactattcgtggtgggccgaggttcatcagactcccagaggtcacagcctc tcatgcacgaagctgctaagtccacactcctctggtgaaggacaagaggaagaaaaacca gagtcccggttagcaatggtcaacagggagattgtacgcaggggagctctgattctcttc tgtgactacgtttgtcagaatctccacgactcggagcatttgacctggctgatcgtcaac cacgtgcgtgacctcatcagtctttcccatgagcctccagtacaagatttcatcagcgct gtccaccgcaactctgccgccagtggcctcttcattcaggcgatccagtctcgatgtgac aatctccccactcctaccatgctaaagaagactttacagtgtttggaaggcatccacctg agtcagtctggctctctgctcatgctttatgtggacaagctgctcaacacgccgttcagg gttttagctcgcatggtggacacgctggcgtgccgaagagtggaaatgttgctggctgag acgctgcagaacagcatagcccagctgcctgtggaggaactggagaggattcaggaatac ctccagaccagcgggctagctcaaaggcatcagaggttctactccctgctggacaggttc agagccactgttgccgacaccagcagcccagcacctccagtcacgtcccaccctctggat ggggatccacccatagcccctgaaaaggttgttgccgacaaggagtggtatgttgctctg gtgaagtcgcagtgctgtctccatggagatgttttcctgctcgaaacaacagagcttctc actaaattacctgctgctgatctattctccgtcatgagctgcaaggatttcaatctcagc ctgttgtgtccctgcctgggtttgggggtgcagaggttaacccggggtcagggatctctg ttgttggagacggccctgcaggtgaccctcaatcagctagaagaggtcacggggtcactt cctgccccacaccaatccttcctgccgccacctcacccccagccatactggaaccagctg ggtgacgtgtatgacgagccgggcttctaccccagggttctggcgctctgcagagctttg tcccagtatctgttgagtgtgaatcagctaccttcatcactacatattccctctgacaag gagcacctcatcgcctccttcacctgcatggcggctgaggtggttgcatggcggctgctt caggaccagctgcccctcagcgtggacctgcagtgggctctgtcctgcctctgcctggcc ctgcagcagccgtgtgtgtggaacaaactctctaccttggagtacaagacgtacacctgc tccctcatctactgcctgcacctcaccattgctgctgtggctgttcatcctggtgaccgg ctgctgcatccagagaagaaaaagtctcgaggagaaaaaaacggtgaagatcagctggat tcggctcttctcaacatccaatgcgagtggcaagcatgtgagatcatggcagaactggtg gaaggactgcagagcatcctctccttgggtcacccgaggaaccgggcgtttccggtgttc ctcacgccgacgttgcgaaacatcatcatcagtatttcacgcctgcctctggtcaacagc tacaccagagtacctccactggtttggaagctgggctggtccccacaaccaggtggagaa tttggcacaacgctgcctgagatccctgtggacttcctgcaggaaaaggacgtcttcagg gaattcctttaccgcatcaacacattgggctggagcagtaggactcagtttgaggaaacc tgggccactctgctgggggtgctggtcacccagccaatcacaatggatcaggaggaagag actcagcaagaggaggacctggagcgtacccagttaaacgtgctagcagtgcaggctatc accagcctggtgctgagcgccatgaccctgcccactgctggcaaccccgcagtcagctgt ctggaacagcagccccgaaacaaaagccttaaagctctggaaacacggtttggaaggaaa ctcgctgtgattcggggagaagtggagcgagaaattcaggctctagtgtcaaagagggac aacgtcggcacacaccacccgtaccacgcctgggatcctgtgccctcactctcggctgct tctgcaggtacgctgatcagccacgagaagttgctgcttcagatcaacacagagagggag ttgggcaacatggattacaaactggggcaggtctccatccattcagtctggttaggtaat aacatcactcctcttagggaggaagaatggggtgaggacgaagaagacgaagcggacact ccggcgccgacctccccacctttatcgccgataaattcgaggaagcaccgtgcaggtgta gacattcattcatgttcccagtttctcctggagctctacagccagtggttgatcctgggc tctcccagcaacaggaggacgcccaccatcctcatcagtgaagtggtccgatcgctgctg gcggtgtcggacctgttcacagagaggaaccagttcgacatgatgttctccaccctgatg gagctccagaagcttcacccgcccgaagacgagatcctgaatcagtacctggtgcccgcc atctgtaaggctgctgccgtgctgggcatggacaaagcgatagccgagccggtgtgtcgc ctgctggagacgacgctgcgcagcacccacctgcccagccgcatgggggctctgcacggg gtgctctacgtgttggagtgtgacctgctggacgacacggctaagcagctcgtccccaca gtctccgagtaccttctgtcaaacctcaaggccattgctcactgtgtgaacctgcataac cagcagcatgtgttggtgatgtgtgcagtggccttctacatgatggagaactaccctctg gatgtcggagctgagtttatggccgcagtcatacaactctgtggtgtgatggtgtcggcc agcgaggactccactccctccatcatctaccactgcgttctgcgcggactggagcgcctc ctgctgtcggagcagctgtcccgcgtcgacggagaagctttggtcaagctcagcgtggat cgcgtcaacatgtcgtcgcctcaccgagccatggccgccctgggcctcatgctcacctgc atgtacaccggcaaggagaaagccagccctgccagccgccctgcccactctgacccgcag gccccggacagcgagtcggtcattgtcgccatggagagggtctccgtgctcttcgacagg atcaggaagggtttgcccagcgaggctcgggtcgtgtcgaggattctgccccagtttctg gacgacttcttccctccgcaggacgtcatgaacaaagtcattggcgagttcctgtccaat cagcagccgtacccacagttcatggccactgttgtctacaaggttttccagacgctccac gccactggccagtcttccatggtgcgcgactgggtgctgctgtctttgtccaacttcact cagaggacaccggtagccatggccatgtggagcctgtcttgcttctttgtctccgcttcc acctcccagtggatctctgccctacttccacatgtgatcagccggatggggtccagtgag acggtggacgtcaacctgttctgcctggtcgccatggacttctatcggcaccagatcgac gaggagctggaccgccgggcctttcagtcggtgttcgagacggtggcgtcgccggggagc ccctaccaccagctgctggcctgtctgcagtccatccaccaggaagcgtcactctga

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