KEGG   Poecilia mexicana (shortfin molly): 106930985
Entry
106930985         CDS       T08022                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 7
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106930985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmei03019]
    106930985
Messenger RNA biogenesis [BR:pmei03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106930985
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     106930985
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 106930985
NCBI-ProteinID: XP_014864370
Ensembl: ENSPMEG00000004879
UniProt: A0A3B3WLL4
LinkDB
Position
Unknown
AA seq 286 aa
MPAATVDHSQRICEVWSNNLEEELKRIRQVIRKYNYIAMDTEFPGVVARPIGEFRSNADY
QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG
IQFKKHEEEGIETLYFAELLMTSGVVLCDGVKWLSFHSGYDFGYLIKILSNANLPEEEVD
FFEILRLYFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK
MREMFFEDHIDDAKYCGHLYGLGSGSAYVQNGTGNAYEEEANKQQS
NT seq 861 nt   +upstreamnt  +downstreamnt
atgcccgcagccactgtggatcacagccaaagaatatgtgaggtttggtccaacaacctg
gaggaggagctgaagaggatccgacaggtcatccggaaatacaactatatcgcaatggac
acggagtttccgggcgttgtcgccagaccgattggggagttcaggagcaacgctgactac
cagtaccagttgctgcgctgcaacgtggatctgctgaagataatacagctgggtctcacg
ttcatgaacgagcagggagaatatcctccaggaacgtcaacgtggcagttcaactttaag
ttcaacctcacagaagatatgtatgcacaggactccattgagcttctgaccacttcaggg
attcagttcaagaagcacgaggaggaaggcatcgagacgctgtacttcgcagagctgctg
atgacgtccggagtggtgctgtgcgacggcgtcaagtggctgtcttttcacagtggctat
gactttggatacctgatcaagatcctgtctaacgccaacctgcctgaggaggaggtggac
ttcttcgagattctccgcttgtacttcccggtcatttatgatgtcaagtacctcatgaag
agctgcaagaacctgaagggcgggctgcaggaagtagctgagcagctggagctggagagg
atcggaccgcagcaccaggcaggctcagactctctactcaccggcatggcgttcttcaaa
atgagagagatgttcttcgaggatcacatcgacgatgcgaagtactgcggccacctgtac
ggtctgggctcgggctccgcctacgtgcagaacggaacgggaaacgcctacgaagaggag
gccaacaagcagcagtcgtga

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