Poecilia mexicana (shortfin molly): 106931261
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Entry
106931261 CDS
T08022
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106931261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106931261
Enzymes [BR:
pmei01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106931261
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
HECT type E3
106931261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
MlaC
Motif
Other DBs
NCBI-GeneID:
106931261
NCBI-ProteinID:
XP_014864770
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MFSWGEDCQRGFCLKGDPITEEGVHYLNVGHNVTDLSAGRSVLAFLKCNGNAFILRTNES
KDGNRVRGKQKFVKCKEKIEAVSCEDDVVMLLSEKGSVFCVDTTHTPYTPRTLDSFSSIP
VVQVACGSQHSVALTKEGQVYTWGLDSRGQLGLGKRSSGARSPQQVRSLLSVPVVQISAG
GDQSFALSVSGGVFGWGRNDCGQLGLGDTKDMYTPACVRSLNLKKTGDICCGKDHTVVLT
KHGVVFTFGSGQYGQLGHNSLRNELRPRLVAELWGAKVIKIACGRYHTLVLTHSQKVYSF
GCGTQGQLGNREESNPSVPLPVRLPPVSDAVRSRIGTIFAGENCSFAACSSDEDVSINSD
TNTVSKATQHGLEDLVDNWTSNCDAKSWKKIKQEIHRTFSSASCLNKSFLEEGKNKHFQT
SSKYHGLNLKLARRHFKKLVKTEDVWIEVEASVLHLLPLLDKNPVGVESLRIFLLLNELL
HVVQKHRKQQQRSKLAEMVATAVTSLSRESLKVLGEWWSSLSSSTMERFVSVWRKALCAI
LSDEDAPRSDGVRNLLQVLQYMYNVNSRMSESQRLPESDFYVMIDQKFLLGELQIWRSKS
KRRYVRDEPVVLCNFPIVMDLQTKKLVFDMNTYLTWFQNVIPFQTQQLFRSFFSWVVASX
XXFVELELSRASVLSDTFEQLAATDQTNYKMPLMVFFDENHEFDHVYKKDFFHEVFHELM
STESDMFMFNDSKTLAWFSSTKASQEDQRFHLFGVLCGLALYNKVIIYLPFPLVLFKKLL
GARPSLDDLKEFSPSYGNGLQSILDTEEDPEEMYFTISWDGTEIDLDPENPDKQVTSENK
REFVDAFVNYVFNTSVEVAFYEFKQGFFQVCDRDLVKLFTPKELQEILVGKDFYDWEKLK
QNTVYEGEYNADHPIIQMFWEVFDELTENQKNSFLWFVTGFERVPILGLDKIKMNIKVKP
LQDDQYYPATQTCFSTLELPLYSTKGIMQAKLIEALSNKRISQYV
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgttttcttggggagaagactgtcagcgaggcttctgcctcaaaggagaccccatcaca
gaagaaggagttcattatttaaatgttggtcataatgtcacggatctatcagcaggtcgc
agcgtgctggctttccttaaatgtaacgggaatgcgttcattttgcgcactaatgagagc
aaagacggaaacagagtaagaggaaaacagaagtttgtgaagtgtaaggagaagattgag
gcagtgagctgtgaagatgacgttgtgatgctgctgtctgagaaaggctccgttttctgt
gtggacaccacccacaccccgtacacacccaggacattggactctttttctagcatacca
gttgtacaggttgcgtgtgggagccagcattcagttgctctgacaaaagagggtcaggtg
tacacctggggcctggactccaggggtcagctcggactggggaagagaagttcaggagcg
agatcacctcagcaagtccgatccttgttgtccgtccccgtggttcagatctctgcagga
ggagaccagagcttcgccctctctgtgtccggaggcgtgttcggctggggcagaaacgac
tgtggacagctcggactgggagacacaaaagacatgtatacaccagcttgtgttcgtagt
ttgaacctgaagaaaacaggcgacatttgctgcggaaaggaccacaccgtcgttttgacg
aagcatggggtagtgttcacattcggttctggtcaatatgggcaacttggacacaactcc
ctgcgaaatgaactccggcctcgacttgttgctgaactttggggggcaaaagttatcaag
attgcatgcgggaggtatcacacattagttttgacacacagccaaaaagtctactccttt
ggttgtggaactcaaggtcagctgggaaacagagaagaaagcaatccatctgtgccgcta
cctgttcgtctacctccagtttcagatgcagttcgttccagaattggaactatctttgct
ggagaaaactgttcatttgcagcctgctcttctgatgaggacgttagcataaattcagac
actaacacagtcagcaaagcaactcagcatggtttagaagatttagttgataactggacg
tctaattgtgatgcaaagtcatggaaaaagattaagcaggaaatccacaggacattttca
tctgcatcctgtttgaacaaaagcttccttgaagaaggaaaaaataaacatttccaaacc
tcatcaaagtaccacggtctgaacctgaaactggctcgacggcattttaagaaactggtg
aaaacagaagatgtctggatagaggttgaggcatcagttctgcatttgctccctctcctt
gataagaacccagtaggagtggagagtctgaggatctttctgctcctcaatgagctcctt
catgtcgtccagaagcacagaaagcagcagcagcgcagcaagttagctgagatggtcgct
actgctgtaacaagtctgtcaagggaaagcctcaaggttttaggtgagtggtggtcctcg
ctgtcgtcatccaccatggagagatttgtcagcgtgtggaggaaagctctctgtgcgatc
ttgtccgatgaggatgctcctcgcagtgacggtgtcaggaacctgcttcaagttcttcag
tatatgtacaatgttaacagcaggatgtctgagtctcaaaggctgccagaaagtgatttt
tatgtgatgatcgaccaaaagtttctcctcggagaactgcaaatctggcgttcaaaatca
aaacgcaggtatgtgcgtgatgagccagttgttctgtgcaacttcccgattgtgatggat
ctgcaaacaaagaaactggtttttgacatgaatacttacctcacttggtttcaaaacgtt
attcccttccaaacccaacaactgtttaggtcttttttttcctgggtcgtagcttcnnnn
nnnnnnttcgtggagctggaactgagccgagcctctgtgttaagcgacacatttgaacag
ttggctgctactgatcagacaaactacaagatgccacttatggtgttttttgatgagaac
catgaatttgatcatgtctacaagaaagacttttttcatgaagtctttcatgagttgatg
tctactgagtctgacatgttcatgttcaatgactccaaaacactggcgtggttctcctct
actaaagcttcgcaggaggaccagcgtttccacctgtttggggttctgtgtggactggct
ttgtacaacaaggtgatcatttacttacccttcccactggtgctgttcaaaaagctgctt
ggagcgaggccatcactggacgatttgaaagaattcagtccaagttatggcaatggtctg
cagtccatcctggacacagaagaagacccagaggagatgtattttacaatctcatgggat
ggaactgagattgatcttgatcctgaaaatcctgacaagcaagttaccagcgaaaacaag
agagagtttgttgacgcctttgtgaactacgtcttcaacacatcagtggaggttgcgttt
tatgagttcaaacaaggtttcttccaagtttgtgaccgggatttggtgaaactttttaca
ccaaaggaactacaagaaatcctagttggaaaggatttctatgactgggagaagctgaaa
cagaacacagtttatgagggcgagtacaatgccgaccaccccatcatacagatgttttgg
gaagttttcgatgaactgactgagaatcagaagaacagctttctgtggttcgtcactgga
tttgaacgggtgccgatcctcggcttggacaagataaagatgaatatcaaagttaaaccc
ttgcaggatgaccagtattatcctgcgacccagacgtgtttctcgaccctggaactgccg
ctgtattcaaccaaaggcatcatgcaagccaagctgatcgaagctcttagcaacaaaagg
atcagtcagtacgtttga
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