Poecilia mexicana (shortfin molly): 106931264
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Entry
106931264 CDS
T08022
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmei04515
]
106931264 (clstn1)
Cell adhesion molecules [BR:
pmei04515
]
Cadherins
Cadherin related
106931264 (clstn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
EphA2_TM
V_ATPase_I
Toxin_R_bind_N
Cadherin_C_2
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
106931264
NCBI-ProteinID:
XP_014864784
Ensembl:
ENSPMEG00000017217
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MRFRGNKQFASAVGLVLGLLCAVEAAKVNKHKPWIETTYHGIVTENDDKVILDPPLIALD
KDAPLRYAESFEVTLTKEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKEKLDCELQKE
HTFTIQAYDCGEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKTYKATVIEGKKYDNIL
KVEAVDADCSFQFSQICSYEIVTPDVPFTIDKDGFIKNTEKLSYGKEHMYKLTVTAYDCG
KNRASEDVLVKISIKPTCRTSWQGFNKRTEYEPGTGSLALFPSMHLETCDVPITSVRASI
ELETNHIGKGCDRDTYSEKSLHKLCGASSGTVELLPAPSSSANWTVGLPTDNGHDSDQVF
EFNGTQAIKVPDGLVNANLKEPFTISVWMRHGPGSHDKETILCNSDKTDMNRHHYSLYVH
NCRLILLLRQDPSEAENYKPAEFHWKLDQVCDKEWHHYVLNVEFPTVSLFVDGTAFEPFM
VTEDYPLHPSKIETQLTVGACWQENSGHDNDTEAAPETTSGGNARMAQFFRGNLAGLIIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVDFNPSQSSLTVEGDDIGAFDKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCLNEDACVAVPDAEGYVMVLQPEEPKISLSGIDHFAR
SAAEFESQEGVTLFPELRIVSTITREMEADAESEAAEGTDDDPTVQETVVSEEIMHNLDS
CEVSVVGDELDGEHESLEVDVSQLQQRALEMSSSNLGLVITGVNTMANYEQVLHLIRYKN
WHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTSNPVEHANNAMVQPNFINPVHHAS
VDLSGHNLVNAHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQRSMRDQESGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEESEDGEEEDDITSAESESSEDEEGGEP
EDQQGTSRQQQLEWDDSTLTY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccgagggaataaacaatttgcatccgcagtcggactggtcctcggactatta
tgcgcggtggaggcagctaaagtcaataagcacaagccgtggatcgagacgacgtaccat
gggattgtgacggagaacgatgacaaggttattctggacccgcctctaattgcgctggac
aaagacgctcctttacgctacgcagagagttttgaggtgaccctcaccaaagaaggtgag
atttgcggcttcaggatccacgggcagaacgtccccttcgaggcagtggtcctggacaag
tccactggcgagggggtcatcagggccaaggagaagctcgactgtgagctgcagaaggag
cacaccttcaccatccaggcctacgactgtggagagggtcctgacggcgccaacatgaag
aaatcacacaaggcgaccgtccacatccaggtgaacgacatcaacgagtactccccagtg
ttcaaggagaagacgtacaaagccaccgtcatcgaggggaagaaatacgacaacatcctg
aaggtggaggcggtggacgccgactgctccttccagttcagccagatctgcagctacgag
attgtgacgcccgacgttcccttcaccatcgacaaagacggctttattaagaacactgag
aagctgagctatggcaaagagcacatgtacaagctgaccgtgaccgcctacgactgcggg
aagaaccgagcttctgaagacgtgttggtcaaaatcagcataaagcccacatgcagaacc
agctggcaaggtttcaataagaggactgagtatgaaccgggcaccggtagcctggctctt
ttccccagcatgcacctggagacctgcgatgtgcccatcacctccgtccgggccagcatt
gaactggaaaccaaccacatcggaaagggctgtgaccgtgacacgtactctgagaagtca
ctgcacaagctgtgtggagccagctccggcaccgtggagctccttcctgctccgagcagc
tctgccaactggacggtgggactgcccactgataatggacacgacagcgaccaggtgttt
gaattcaacggcacccaggccatcaaggtgcccgatggtttggtgaacgccaacctgaag
gagcccttcaccatctctgtgtggatgaggcacggacccggctcccacgacaaggagacg
attctctgtaactcggacaaaacagatatgaacagacaccactactccctctacgttcac
aactgcaggctaatccttctcctccgccaggatccgtccgaggcggagaactacaaacca
gcagagttccactggaaactcgaccaggtgtgtgacaaagagtggcatcattatgtgctc
aacgtggagttccccaccgtttctctgtttgtggacgggacggccttcgagcccttcatg
gtcacagaggactacccactgcacccctctaagatcgagactcagctcacagttggggcc
tgctggcaagaaaactcgggacatgacaatgacactgaggcggcccctgagaccacctca
ggcgggaacgcccgaatggctcagtttttccgaggaaaccttgcaggcttgatcatccgc
tccggcaagctggagaacaagaaggtgatcgactgtttgtacacctgcaaagaaggcctg
gatgtgcagctgcctgaggaagtggcttcagcggtgaaggttgatttcaaccccagccag
tcctctctgacagtggaaggcgacgacatcggcgcctttgacaaagtcatgcagcacatc
tcctacttaaactcccgccagttcccaactccaggcattaggcacctccgcatctccacc
actgtcaagtgtttgaacgaggacgcctgcgtggcggtgccggacgctgaaggctacgtg
atggtgctgcagcccgaggagccgaagatcagcctgagcggcatcgaccacttcgcccgc
agcgccgccgaattcgagagccaggaaggcgtgactctgttccccgagcttcgcatcgtc
agcaccatcacccgggaaatggaggccgacgcagagtctgaagcagcagaaggcaccgac
gacgaccccacagttcaagagacagttgtgtcagaggagatcatgcacaacttggactcg
tgtgaagtgtctgtggtgggagatgagctggacggcgagcatgagagcctggaggtggac
gtctctcagctgcagcagcgcgccctggagatgagctcgtctaaccttggcctcgtcata
actggtgtgaacaccatggccaactatgagcaggtcctgcacctcatccgctacaagaac
tggcacaccgaagcgctctttgaccggaagttcaagctggtctgctctgaactcaacggt
cgctacatcagcaacgacttcaaggttgaggtcaatgtgattcacacgtccaatcctgta
gagcacgccaacaacgccatggtgcagcccaacttcatcaatcctgtccatcacgcctcc
gtcgatctgtctggtcacaacctggtcaacgctcaccaggcttcggtggtccccagcgcc
gccaccatcgtcatcgtggtgtgtgtgagcttcctggtgttcatgataatcctgggcgtg
ttccgcatccgagctgcacaccagcgctccatgagagaccaggagagcggcaaggagaac
gagatggactgggacgactcggccctcaccatcacagttaaccccatggagacgtacgag
gaccaacacagcagcgaggaggaggaggaagaggaggaggagagcgaggacggggaggag
gaagacgacatcacgagcgctgagtcagagagcagcgaggacgaggagggcggcgagcca
gaagaccagcaggggaccagcagacagcagcagctggagtgggacgactccaccctcacc
tactga
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