Poecilia mexicana (shortfin molly): 106931385
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Entry
106931385 CDS
T08022
Name
(RefSeq) partitioning defective 3 homolog
KO
K04237
partitioning defective protein 3
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04144
Endocytosis
pmei04517
IgSF CAM signaling
pmei04520
Adherens junction
pmei04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106931385
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106931385
09144 Cellular community - eukaryotes
04520 Adherens junction
106931385
04530 Tight junction
106931385
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmei01009
]
106931385
Protein phosphatases and associated proteins [BR:
pmei01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106931385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
NPR1_like_C
Motif
Other DBs
NCBI-GeneID:
106931385
NCBI-ProteinID:
XP_014864970
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MLKPVEVSNEGGPLGIHVVSFSSHDVRTQGLLVKRLEPGGKAEHERLFQENDCIVRINQG
DIRNLRFEQAQNIFRQAMRCPVILFHVVPASMKRQYEILSVQNELSSPQSTRVRFSQDSQ
HPGDRSSLDSGTPSRSGQQAAVNQDHQGPLAGSTPEPSRRFATLPHAVPHPIISRTPSAP
SPSLQRRISTTPSNSSYLKKKGRSFNIQLKKGPEGLGFSITSRDVPIGGSAPIYIKNILP
RGAAIQDGRLKAGDRLLEVSGVDLNGKSQEEVVALLRATPMDGMVNLLVLRQEDTLLPRE
VWTSTSFCQLRQKQDDDTVLTPDGTQEFLTFEVPLNDSGSAGLGVSVKGNRSKENHADLG
IFVKSIIHGGAASKDGRLRVNDQLIAVNGESLLGMTNQDAMEALRKSMSVEGNKRGMIQL
IVARRLIKDGEDSSGMSELPVNVPLDDDEDQLSQSLYETIDFPDNMPASRTNILARNGVY
QLSPTVNMPQDDTVMIEDDRPPLLPAHLSDQSSSSSHDDMGFVGENPVAWIREVPSHNEC
SLSPDAEPDASFQREGFARQSMSEKRIKQYESPAHLDIIKNRKSKSMDLGFEERQIGSSL
GLKKSSSMESLQKDAANVMAGDELNVQRIHSRIIRGRGCNESFRAAIDKSYVKTGLIPRE
ENSVETLDEDTEDSYRSGLESMSTSGDLSLGGGLVDDKQKDGALGGPKETKSVDKEKDKD
KNKPKKGVLRGLGEMFRFGKGKKDEDKVDRKSSRRSKAEDKQGYEDETIQMKQEQERIQA
KTREIRERQAKEREYAEIQDVVSRTFSSDEEHTYAGIGSLGSSQDSGSIDPYGHHYHLPQ
SPQSPRSPVNPQRNGPPLEALYAQVNKHRNGRPAAPDR
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagccggtcgaagtgtccaatgaaggagggcccctggggatccacgtagtttct
ttcagttcacatgacgttaggactcagggcttgctggtgaagcgtttggagcccggagga
aaagctgagcacgagcgtctcttccaggaaaacgactgcatcgtcaggattaatcaggga
gacattcgcaacctgcgcttcgaacaagctcagaacattttcaggcaggcgatgcgttgc
ccggtcattcttttccatgtggttcctgcctccatgaagagacagtatgaaatactatcg
gtccagaacgagctcagctcaccccagtcaaccagggtccgcttcagccaagactcccag
cacccaggggaccggtcaagtctggactcagggacgccgtccagatctgggcaacaagcg
gccgtcaaccaggatcaccaaggtcctctggcaggaagcaccccagaaccaagtcggcgg
tttgccaccttaccccatgccgtacctcaccccataatctccaggaccccctcagcgcct
tccccctccctgcagcgcagaataagcacgactccatccaacagctcctacctaaagaaa
aaaggacgcagcttcaacatccagctgaagaaaggtccagagggtctcggattcagtatc
acctccagagacgtccctattggaggaagcgctcccatttacataaaaaacattctccct
cgaggtgctgccatccaagatggacgactgaaagctggagatcggctgttggaggttagt
ggagtggacctgaatggaaagagccaggaggaagtggtagccctgcttcgagccacgccc
atggacgggatggtgaacctgttggtgcttcgtcaggaggacacacttctgccacgagaa
gtgtggacctcaacatcattttgtcaacttaggcaaaaacaggacgatgacacggtgcta
accccggacggaacacaagagtttctgacgtttgaggtccctctgaatgactcgggctcc
gctggcctgggggtcagcgttaaggggaaccgctctaaggagaaccatgctgatctgggc
atctttgtgaaatccataattcatggaggtgctgctagcaaggacggacgtcttcgagtc
aatgaccaactcattgcagtcaatggggagtcgctgcttgggatgaccaatcaggatgcc
atggaggcgcttcggaagtccatgtcagtagagggcaacaaacgtgggatgattcagctc
atcgtggcccggcggttgattaaggacggcgaggacagttcaggaatgtcggagcttcct
gtgaatgtacctttggacgacgatgaagatcaactctcccagtcactctatgaaacgatc
gacttcccggacaacatgcctgcatcacgcactaacatactcgcacgcaacggcgtctac
cagctctctccaactgtgaacatgccacaagacgacacggtgatgattgaggacgacagg
ccgcccctgcttcctgcccacctgtctgaccagtcgtcctccagttcccacgacgacatg
ggctttgtgggagaaaacccggttgcctggatacgtgaggtgcccagtcataatgaatgc
tctctgagtccggatgcagaacccgatgcttccttccagagggagggcttcgcccgccag
agtatgtcagagaagcgcatcaagcagtacgagagcccggctcatctggacatcatcaag
aaccgcaagtccaaaagcatggatcttggttttgaagagcgacaaatcggctcttccctg
ggtctaaaaaagtccagctcaatggagagtctccagaaagatgccgccaacgtcatggcg
ggcgacgagctcaacgtccagaggattcattcacgcatcatcagggggcgaggctgcaac
gagagcttccgggcggcaattgacaagtcatatgtgaagactggtctcataccaagggaa
gaaaacagcgtggagacattggatgaagacacagaggacagctaccggtcaggcctcgag
tcgatgtccacaagcggcgacctcagcctaggcggcgggctggttgacgacaaacagaaa
gacggtgccctgggggggccgaaggaaaccaagagcgtggacaaggagaaagacaaggac
aagaacaaaccaaagaagggtgtgctgaggggcctgggtgagatgttcaggtttggaaag
ggcaagaaggacgaggacaaggtggacagaaagagctcaagaagatcgaaagctgaagat
aagcaaggatatgaagatgaaaccatccaaatgaagcaagaacaggaaagaatccaggcc
aagacacgggaaattcgggagcggcaggcgaaggaaagggaatacgccgagatccaagat
gtcgtcagccgcaccttcagctcggatgaggagcacacctacgccggcatcgggtcactg
ggctcgtctcaggacagcggcagcatcgacccctacggccaccactaccacctccctcag
agcccgcagagtcctcgatcccccgtcaacccacagcgtaacggaccgcctctggaggcg
ctgtacgcccaggtcaacaagcaccgcaatggacgacccgcggctcccgacaggtaa
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