Poecilia mexicana (shortfin molly): 106931538
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Entry
106931538 CDS
T08022
Symbol
dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106931538 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106931538 (dhx36)
03012 Translation factors [BR:
pmei03012
]
106931538 (dhx36)
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106931538 (dhx36)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106931538 (dhx36)
Translation factors [BR:
pmei03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106931538 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
NPHP3_N
AAA_19
AAA_16
Motif
Other DBs
NCBI-GeneID:
106931538
NCBI-ProteinID:
XP_014865195
Ensembl:
ENSPMEG00000008396
UniProt:
A0A3B3YE48
LinkDB
All DBs
Position
Unknown
AA seq
1062 aa
AA seq
DB search
MSYCYGGGGGRRSRKGGRGYRDGSRERLDREGGGGGGRGFRGHGSDFDQDRGAGGGQRDR
PPPHLRGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREEHITKLLNSVQSDPTRDSRD
AQSSASDAWRTAASSSSSHCYFDGDMPEEEKRKLEEEEQKKTSRTSQRGSSTAAKDEPPD
NWDEDDEDDVEKEKPMSEDEDLEFLFQEVVRDASVDEDLKRDLESKKTDRNYKEMLKFRE
KLPSYGKKEDLVRLINSNRVLVVSGETGCGKTTQVTQFILDDHISRGLGSTCRVVCTQPR
RISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQWLRSDPLL
SSVSHLVLDEIHERNLQSDVLLVIVKELLNLRDDLKVILMSATLNAEKFSKYFDKCPMIH
IPGLAFPVEEFLLEDIIEMTRYRPQNQDRRPAWKRRFWQGHQSRSEKEEKEEEYKESWPC
YARTLQGRYSDSTIEAVEMLDTDEKIDLELILALIRHIVLNEREGAILVFLPGWDNISSL
NDLLMAQQMFRSERFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETSITIDDVV
YVIDGGKIKETNFDTDNNISTMTAEWVSLANAKQRKGRAGRVQPGKCYHLYNGLRASLLE
AYQLPEIMRTPLEELCLQIKILKLGSISRFLEKALDPPSEKAVNLAIKSLTDLNALDHAE
NLTPLGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKMADMR
RRTLSRNSKSDHLTIVYAFKGWQEAKQRGSRYEREYCWDNFLSANTLQMLHNMKGQFAEH
LMSAGFVSSRDPNDAKSNINSDNEKLIKAVIVAGLYPKVAMIRPSYNKKRPGVKVYTQTD
GKVCIHPKSVNAEEREFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQKDEG
QETVAVDRWIVFRSPARIAHLVKSLKRELDSLLQDKISNPAPVDWDNRQSKDCAVITAII
DLITTEERPAGSSKDDGKTWASAPSGRHSYFDDDDDNDDDDD
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgagttattgttacggcggtggaggtggaagaagaagcagaaaaggaggtagagggtac
agggatgggagcagagagagactggacagagaaggaggaggaggcggtgggagaggtttc
agaggacacggttccgacttcgaccaggaccgaggagcaggaggaggtcagagggaccgc
cctcctccacacctgaggggccgggagattggtttgtggtacgcgcggtatggagccgtg
aggaggaaacaagcggaccgcagatcgcgggccgtggtccaaatggacgaggccagagag
gaacacatcaccaagctccttaactctgtccagagtgacccaactagagacagcagggac
gcacagtcctcagcgtctgacgcctggcggacagcagccagcagcagcagcagccactgt
tactttgatggggatatgcctgaagaagagaagcggaaattggaggaagaggaacagaag
aaaacaagccgcacatctcaacgtggttcctctacagcagctaaagatgaacctccagac
aactgggacgaagatgatgaggacgacgtggagaaagaaaaaccgatgagcgaagacgag
gatctggagttcttatttcaggaagtagtcagagatgcatcagtggatgaagacttgaaa
agagatttggaaagcaaaaaaacagatcgaaattacaaagaaatgttgaaattcagggaa
aaactaccatcatatggaaagaaagaggatctggtgcggctcatcaactccaaccgcgtc
ttggtggtcagtggggagacggggtgcggaaagaccactcaggtcacccagttcatcctg
gacgaccacatcagcagaggcctgggctcgacgtgccgcgtggtctgcacgcagccccgc
cgcatcagcgccatctccgtagcagagcgtgtagctgcagagagagcagaaagtgtagga
aatggaaattcctgtggttaccaaatacgcctgcagagccggttaccacggagacaaggt
tcaatactgtactgtacaacaggaattattcttcagtggctccgctctgatccgttgtta
tccagtgtcagccaccttgtgctagacgagatccacgagagaaaccttcagtccgacgtt
ttgctcgtcatcgtgaaggaattgctcaacctccgagatgacctcaaggtcatcctgatg
agtgccaccctcaacgcagaaaagttctctaaatattttgacaaatgtccaatgatccac
atccctgggttagccttcccagtggaagagttcctactggaagacatcattgagatgacc
agatatcgtccgcagaatcaggaccgtcggcctgcgtggaagagacgcttttggcagggc
caccaatccagatcggagaaggaggagaaggaggaggagtataaggagagctggccatgt
tacgcacgaacgctgcagggcagatactctgacagcacgatcgaggcggtggagatgtta
gacaccgatgagaagattgatctggagctgatcctggcgctgatccggcacattgtgctc
aacgagagggagggagcaatcctggttttcctgcctggctgggacaacattagcagtctc
aatgacctcctcatggcgcagcagatgttccgatcagaaaggttcgtcatcatccctctg
cactccctcatgcccactgttaatcagacgcaggttttcaaaagacccccgccaggagtt
agaaagattgtgattgcaaccaatatcgcggagaccagcatcaccatagatgatgtcgtt
tatgtgattgatggaggaaagattaaggagaccaactttgacaccgacaacaacatcagc
accatgacggccgagtgggttagcttggccaacgccaaacagaggaaaggacgtgctggc
agggtgcaaccaggaaagtgctatcatctgtacaatgggcttagggccagcctgctggaa
gcctatcaattacctgaaattatgaggacaccgctggaggagctctgcttgcagataaag
attctgaagctcggctccattagtcgatttctggagaaggccttggacccgccgagcgag
aaggcggttaacctcgccatcaagagcctcacagacctgaatgctctggaccacgcagag
aacctgacgccgctgggtttccacctggcgcggctccccgtggagccgcacatcggcaag
ctgatcctgttcggcgctctgctgggatgcctcgaccccgtgctcaccatcgccgcttcg
ctcagcttcaaagaccctttcttcatacccttgggtaaagagaagatggcagacatgagg
agaaggactctgtccagaaactcaaagagtgaccacctcactattgtttacgccttcaag
ggatggcaggaagccaagcagcgggggtccaggtatgagagggagtactgctgggacaac
ttcctgtctgccaacacactccagatgctgcacaacatgaaaggtcagtttgctgaacat
ctcatgagtgctggctttgtcagcagccgggatcccaacgacgctaaatccaacatcaac
tcagacaatgagaagttgatcaaggcagtgattgttgctgggctctaccctaaggtggcc
atgatccgaccctcttacaacaaaaagagacctggggtcaaggtgtacacccagaccgac
ggaaaagtgtgtatccatcccaaatctgtcaatgctgaagagagggaattcaactacaca
tggctcatttaccacctgaagatgagaaccagcagcatcttcctgtacgactgcaccgag
gtgtcgccgttctcgctgctgttcttcgggggagacatcaccatccagaaagacgagggc
caggagaccgtcgcggtcgaccgctggatcgtcttcaggtccccggcgcgcatcgctcat
cttgttaagagtttgaagagggagctggattcgctgctgcaagacaaaatcagcaaccca
gctcctgtggattgggataaccgccagtccaaagactgcgccgtcatcacggccatcata
gacctcatcactaccgaggaaaggcctgcaggcagcagcaaggacgacggcaagacgtgg
gcgtctgctcccagcggaaggcactcttacttcgacgatgacgatgacaatgacgacgat
gatgattga
DBGET
integrated database retrieval system
