Poecilia mexicana (shortfin molly): 106931629
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Entry
106931629 CDS
T08022
Symbol
trpa1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmei04040
]
106931629 (trpa1)
Ion channels [BR:
pmei04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106931629 (trpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
Ion_trans
Motif
Other DBs
NCBI-GeneID:
106931629
NCBI-ProteinID:
XP_014865326
Ensembl:
ENSPMEG00000006315
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MLYIAINISVQLAEKGDLTLLENLVRKSPEVLCEKDECGASPLHHAAAGGHVSLIRFITS
VIDPQELNSCDDQGNVPLHWAVERNKAESCRALMDLGANPNILNNALLSPLHLAVSLGHN
SLLGMLLSYSVTNCNLQGDLGNTPLILACSLNNCEALNILLKHGAMLCTQNKLGHFAMHA
AAFAGAKKAMEVILKAGEEHGHNAVSHINYLDKSKSSPLHLAVRGGNFETIRLCIATGAK
IDQQQNDRCTPLHLACTQGAIEVVKLMLSTVDQVEDVINLTDGACQTPLHRATIFDHAEL
AEHLISLGSDLNSTDCKGNTPLLLATSCGAWKTVALLLSKGANVNVKDKCGCNFLHLAIL
QPKGLKNLPEEVLQHSSVKALLNCEDNEGCTPLHYACRLGIHDSVKNMLGLSGQVGLACK
SKDKKSALHFAAQYGRINTCHRLLESITDSRLLNEGDERGLTPLHLASKGGHTKVVQLLL
RKGALFHSDYKGWSCLHHAASEGYTQTMDILLSANPKLLDKTDEDGNTALHIAARSGHVA
AVRMMLVRGAELVLNKNDTSFLHEALQNGRKEVVNAVIDSERIEEALRLFVPGSTQRCPI
LDMIEFLPEGCKHLLDRCVKESDDDHNSPDYHIEYDFRWLQAPISQKLIEQGYAPKPLAA
VNAMVQYNRIELLNHPVCKKYLGMKWVAYGSKAHVLNMFLYLLGLLPLTNLIVTLRPSVN
TTETGELDIVMVPTSFSEQSMFLSFCMVMVLITNVYSIGKEVVQISQQRWSYFRDGSNQI
DWMSAISSLLFVVPLMVNAEGSWHWQAGVVAILNSWIGFLLYLQRFEGVGIYVVMFGEIM
RTLLRIVMLFVYLMLAFSLAFHALMLNQKEFNSVPLSVIQTFVMMVGELNYQNNFLDAYL
NNELPFGFLTYGIFVNFVLLMPILLVNLMIGLAVGDIAEVQRNASLKRIAMQIDLHTSLE
DKLPYWFMKRVDKPSVTIYPNRKCSRHFLKQMISGEDERSEVWTRLQSKSQSCTFVENEL
KKQKTRMKEMSGMLEKQHSLLKLIIQKMEISSEAEESDGPVAVKGSMWPSLGHGKARGRS
TSRWVPLIKAIEANRK
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgttatatattgcaatcaatatttctgtgcagttggcagagaagggggacctgacgctt
ctagagaacctggtgaggaagagcccagaggtcctctgtgagaaagatgaatgcggagct
agtcccctccatcatgctgctgcagggggccacgtctccctcattcgatttatcacctct
gtcatagatccacaagagctgaacagctgtgatgaccagggcaacgtccctctgcactgg
gccgtggagaggaacaaagcagagagctgcagggccctcatggacctgggagccaacccc
aacatcctcaacaatgctctcctgtcccccctgcacctggcggtcagcctcggacacaac
agcctgctggggatgcttttatcctacagtgtgacaaactgcaacctgcaaggagacctt
ggtaacaccccactaatactggcctgctctctcaacaactgtgaagctctgaacatactg
ctaaagcacggggccatgctctgcacacagaacaagctaggccatttcgccatgcatgct
gctgccttcgcgggagcgaagaaagccatggaagtcattctgaaggctggagaagagcac
ggccacaatgcagtgtcccacatcaactacctagacaagtccaagagcagccctctccat
ctggccgtgcgtggggggaatttcgaaaccatccgtctctgcatcgccactggggccaaa
atagaccagcaacagaatgatcgctgcacgcctcttcatttggcctgcactcagggtgct
atagaggtggtgaagctgatgctgtccactgtggaccaagtggaagatgttatcaacctg
actgatggggcttgccagacccctctgcatagggctacaatatttgaccacgcggagctg
gcggagcacctgatttctttgggttctgatctgaacagcaccgactgtaaaggaaacacc
cctttgttgttggcaaccagttgtggagcatggaaaactgtagctctgctgctgtccaaa
ggggccaatgtgaatgtgaaagacaaatgtggctgtaactttcttcacctggccatcctg
cagcctaagggtctgaaaaacctcccagaagaagtgctacagcatagcagcgtgaaagct
ttgctgaactgcgaagataacgagggctgcacgccactgcactacgcctgcagactgggt
atccatgactcagtgaagaacatgctgggcctctcgggtcaagttggccttgcatgcaag
tccaaagacaagaagtctgctcttcactttgctgcacaatacgggcgcatcaacacctgc
cacaggttgctggagtccatcacagactctcgtctgctaaacgaaggtgacgagcgaggc
ctgacgccgctccacttggcttccaagggtgggcacaccaaggtggttcagctgttgctg
cgcaaaggagctctctttcacagtgattacaaaggctggagttgtctacaccatgccgcc
tctgaaggatacacacaaactatggatattctgctctctgcgaatcccaagttattggat
aaaaccgatgaggatgggaacactgcactccatatcgctgcgagatctggacatgtggct
gctgtcagaatgatgctggtcagaggggctgagcttgtgctgaacaagaatgacacttcc
tttcttcatgaagcgctgcagaacgggagaaaagaagtggtcaacgctgtgattgacagc
gaaaggattgaggaggctttgcgactgtttgttcccggttccacccaacgatgccccatt
cttgacatgattgaatttctgcctgagggctgcaagcatctgcttgaccgctgcgtgaag
gagtctgatgatgaccacaacagccccgactaccatattgaatatgatttcagatggctg
caggctcccatttcgcagaagctgattgagcagggctacgctcccaagcctctagccgca
gtcaatgcgatggtgcaatataaccgcatcgagctcctcaaccacccagtctgcaaaaag
tatctgggaatgaaatgggttgcctacgggagcaaagctcatgtgctcaacatgtttctg
tacctgttagggctgctgcccttaacaaacctgatagtgacccttcgaccctctgtaaac
accaccgagacaggcgaactcgacatcgtcatggttcccacttcattctcagagcaaagt
atgttcttgtccttctgcatggtgatggtcttgatcactaacgtctattctattggaaaa
gaagtggtgcagatatcacagcagcgttggagttacttcagggacgggtcgaaccagatc
gactggatgtcggctatcagctctcttttgttcgtcgttcccctcatggtcaacgcagaa
ggttcttggcactggcaagcaggcgtagtggccattttaaactcctggattgggtttctc
ctttatctccagaggtttgagggtgttggcatttatgtcgtgatgtttggggagatcatg
aggacattgctccgtatcgtgatgctgtttgtgtatctgatgttggcgttcagcttggcg
ttccacgctctgatgctcaaccagaaagagtttaacagtgtgccgctctccgtgattcaa
acctttgtgatgatggtcggagagttgaactaccagaacaacttcctggatgcttacttg
aacaacgagcttccatttggtttcttgacgtacggcattttcgtgaactttgttctgctc
atgccaatcctcttggtgaacctgatgattggtttagcagtcggagacatcgctgaagtt
caaagaaacgcttccctgaaacgaatagcgatgcagattgatctccacacatccctcgaa
gacaagctcccttactggtttatgaagcgagtggacaaaccctcagtcaccatctacccc
aatcgcaagtgctccaggcacttcctaaaacaaatgatctctggggaggacgaaagaagc
gaagtctggactcgtctgcagtccaaatcgcagagctgcacgtttgtggagaatgagctc
aaaaagcagaagaccaggatgaaggaaatgtcaggcatgttggagaagcagcactctctg
ctcaagctcatcatccagaagatggaaatctcctctgaggccgaggagtccgacggtccc
gtggcagtcaaaggcagcatgtggcccagcttgggtcatggcaaagcaaggggccgcagc
acgtcccgctgggtgccgctgattaaggccatcgaggccaaccgcaaatag
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integrated database retrieval system
