Poecilia mexicana (shortfin molly): 106932027
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Entry
106932027 CDS
T08022
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106932027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmei03000
]
106932027
03021 Transcription machinery [BR:
pmei03021
]
106932027
03036 Chromosome and associated proteins [BR:
pmei03036
]
106932027
Transcription factors [BR:
pmei03000
]
Eukaryotic type
Helix-turn-helix
ARID
106932027
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106932027
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106932027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
106932027
NCBI-ProteinID:
XP_014865975
Ensembl:
ENSPMEG00000010394
UniProt:
A0A3B3X0J5
LinkDB
All DBs
Position
Unknown
AA seq
2290 aa
AA seq
DB search
MAAQVATLNTSPPSELKKPDRDPKEDTVPGDKQSDKKQPCLDSESPGRGDLQDGADGGNA
GGGGEPEMKNGNGNPPRVNNNTPNDSVGPEGNNHPGFVHHHGPTFSPPSYGYSQHYGRPA
FHQYGGQQSPGMAAAAGPGVQSSNMMDPYQPNSHDHGFSNHQFNNYNPFPNRTPHPGQAF
GMNSPRSAQAPTAGGQPAKQQPPPGGPTAMAGSYSNQRYNIGNPQPTSTPTLNKLLTSPS
STRGYPNYPSGGDYSSQEGASKGPADMGSSGQYAGSNPGWQQRTHHPSPMSPGSAGQPLA
RNQPPGPMDPMGKMRSQPFGAGSPYSQQSQQVPPTGPQSGPGYPGQGYGTPGPQRYPVGM
PSRTPGSMGAMPYGPQMGSYGQQGPGGYGSQGQAPYYNQPGQAPHQSQQQSLYSQPQPGQ
PGRQSPYPGQPHPPSSAPHNQGAPPYQQPHMPPQSQGPLPGPSQGAPQSQPPYSQAPATQ
PSQSPYGQQQGPPTQTAQQPSSQAPPGSQGQPSYPGSSQGPQQAPPQQQQQAQSHPQQPP
GHGQHPQGPPAAYPPNAQQQQQQAQQSPYQRFPPPQQQEISQDSFQSNAPASSQPKSGPE
DGQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLP
GIRGPSPSPAGSPASASTPRTGPLSPANLPGTQMPPRPSSVHSDGTLHPGMSQSPMAQDR
GFMQRNPQMPPYVSPQSASALSPRQSSGGQMHPGMAPYQQNNSMGGYGQQGGQYGPQGYP
RQPAYGNMPNANYPGTGMGSMNPMAGQAGGPPYAGMPPGRMPPNQMGARPYGPNMGPSMG
PNMPPNMGNMPPQVSSGMCPPPGMNRKPQDPAAMQHPSTNSMLNRMPGYPNMSQGMMGSG
PPYGPPMNSMPGMMNTPGGSPYPMGPNMANNTTGMAPSPEVNNKMNNKVDGGATPKPESK
SKKSNSSTTTCEKITRLYELGPEPERKLWVDRYLAFVDEKAMGMTNLPAVGRKPLDLFRL
YVSVKEIGGMMQVNKNKKWRDLATTLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPP
PEIFTDNKKNQAAKVQPPSPASLCSTAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTP
HTQMPPMPPVPRSSVNLQDPFSDGSDPAFPRKNLTPNSTYQPGMNTADLPGRMGPYEPNK
DPFSNMRKVGEQFLPASQGPNNVVGDQQQQQQPPPPPQQQPPFNRGPPGAMGTMPMGPRQ
QYPFGPGYDRRPEQGMAPEGNMGSGPPQPNPMMPANTDTGMYSPNRFPPQQPRHDSYGNQ
YPGQGTPPTGSYPNQQPGMYPQQGYKRPVEGGYPPSKRHEAEYSSSFPGGQQGPQQQQQG
GTAAPSSGQQEPYNQYSGSGPFPGPDRRPPGPSNQFPFPFGRERMLATAGPNAQPNMPPQ
MMQSGPEGPQGGMWQGPRDVNYQNYPRQGGPGGPTQGPSYHGMNRPDEMMQSDQRMNHDG
QWGAQMGPRQPPYGPAGPGQPMPRSVQSNYQPPQGVQNHIPQVSSPASIPRPMEARTSPS
KSPYTHGLMKMQKAGPPVPASHIVPPPVQSPLIRRDMPFPPGSVEGTLPVLKPRRRLTMK
DIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSSIATFDLNTLPGLLELVVEYFRR
CLIEIFGILREYEVGDPGQRTLLDPDALKRDLDNLEEEPPRLEDMEQEETDDEEKEEHEM
ERSVPVKEEQDQEPCSQSRDEKTQEERRSKGSSSEQTGSVQSLPAHEKPRQASKFDKFPV
KVVRKRDPFVAAQLSNHGKVQEFDSGLLHWSAGGGDSTEHIQTLFEPRKNFLEPRQRIPV
PSALLKRRPLDENIRGSCLPAEEDRMKHQDEEERPKRSSLSEKSTDSEKAGLTVGNDEEQ
QSDSETKLAEKGPKSHQENNRPILASGSIFNQQAQQTGTILEDEPHSKDEGPLVTLSDWQ
DSLARRCICISNIVRSLSFVPGNDHEMSKHPGLLLILGHLILLHHWHPERKQAPLTYEKD
EDSDEGVGRKDEWWWDCLEILRENTLVTMANISGQLDLSAYPESICLPLLDGLLHWAVCP
SAEAQDPFPTLGPHSALSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGNLVRLI
GDRKVAVCREMAVVLLANLAQGDTMAARAIAVQKGSVGNLLGFLEDSLAATQLQQSQSSL
LHLQGMPFEPTSPDMMRRAARALHALAKVEENHSEFTLHESRLLDLSVSPLMNSLVSHVI
CDVLFLIGQS
NT seq
6873 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccactcttaacactagtccgccttctgaacttaaaaagccggat
cgagacccgaaggaagatacggttccaggggacaagcagtccgacaaaaagcagccgtgt
ttggacagcgaatcgccgggccggggggatctgcaggacggggccgacggtggaaatgca
gggggaggaggggaaccagagatgaagaacgggaatgggaacccgcccagggttaataat
aataccccgaatgactctgtgggaccggagggaaacaaccaccccgggttcgtgcatcac
cacggtcccactttctctccgccttcgtacggatacagtcagcactacggtcggcccgct
tttcatcaatatggcggacaacaaagccctggcatggcagctgctgcgggtccgggtgtg
cagtcgagcaacatgatggacccgtatcaacccaattcacacgaccatggcttctcgaat
caccagtttaacaattacaacccattcccgaacaggactccacacccgggccaggcgttc
ggcatgaactcccctcgcagcgctcaggcgccgacagctgggggccagccagctaagcag
cagccaccgccgggaggacccacggcgatggctggatcttacagtaaccagagatataac
atcggaaatccccaaccaacatccacaccgacgctcaacaaactcctgacctctcccagt
tcaacacgggggtatccaaactatccgtctggtggcgactacagcagccaggaaggagct
agtaagggaccagcagatatgggcagcagcggtcagtacgcagggagcaacccaggctgg
caacaaagaacccatcacccgtcgcccatgagtccagggagtgctgggcagcctctagcc
agaaaccagcctcctggtcctatggatccaatggggaaaatgagaagtcagccatttgga
gcaggcagtccgtacagccagcagtctcaacaggtgcctcctacaggtcctcagtctggg
cctggataccctggccagggttacggcacaccaggtccacagcgatacccagtaggcatg
cccagtcgtacaccaggaagcatgggtgccatgccctacggtccacagatgggatcttat
ggccagcagggaccagggggctacggctctcagggccaggcgccgtattacaaccagcca
ggtcaggctccacatcagagccagcagcaatccctttactcccagccccaacccggtcag
cctgggcggcagtcgccttaccccgggcagccccaccctccatcttcagctccacacaac
cagggggcaccaccgtatcaacagccccacatgcccccacagtcccagggtcccctgcct
ggcccgtcccaaggcgccccccagtctcagccaccttactctcaggcgcctgccacgcag
cccagccagtctccgtatggccagcagcaggggcctcccactcagactgcacagcagcca
agttcccaggctccccccggatcccaaggccaacccagctacccagggtcctcacaaggc
ccccagcaggcccctccgcagcagcaacagcaggcgcagtcccacccgcagcagccaccg
ggacacggccagcatccacaggggccgcctgcagcctacccaccaaacgctcagcagcag
cagcagcaagcacagcagtcaccttatcagcgctttcctcctccacagcagcaggagata
tcccaggactcgtttcagtccaatgctcctgcatcctctcagcccaaatctggtccagag
gacggtcaaggccgtccatccagccttccggacctgtccgggtcgatcgacgacctgccg
acgggcacggagggcgcccttagtcctggcgtgagcacgtccggcgtgtcgagcagccag
ggagagcaaagcaaccccgcccagtcgcccttctctccgcacacgtccccccacctgcca
ggcatccgaggcccctcgccttctccagctggctcccccgccagcgccagcacaccccgc
acaggcccgctgtcacccgccaacttgccagggacccagatgcctcccaggccatccagc
gttcactcggatgggacgctgcaccctggaatgagccagtctccaatggcgcaggacaga
gggttcatgcagcgaaaccctcagatgcctccctacgtctccccgcagtcggcctctgca
ctgtcacctcggcagtcctctggaggacagatgcatcctgggatggcgccttatcagcag
aacaactccatgggtggctatgggcagcagggaggacagtacggtccccaaggttatccc
cgccaaccagcctatgggaacatgcccaatgccaactaccctggaacaggcatgggctcc
atgaaccccatggcgggccaggcgggaggcccgccgtatgctggcatgcctccagggaga
atgcctccgaatcaaatgggggctcgtccctacggccccaatatgggccccagcatgggt
ccaaacatgcctccgaacatgggcaacatgccgccccaggtcagttcaggaatgtgccca
cctccagggatgaacagaaagccccaggatcctgcagccatgcagcacccctccaccaac
tccatgctcaacagaatgcccgggtaccccaacatgtcgcaaggcatgatgggttctggt
ccaccatacgggccaccgatgaacagcatgcctggaatgatgaacactccaggtggatcg
ccttatcccatggggccaaacatggccaacaacacaactggtatggctcctagcccagaa
gtgaacaataagatgaataacaaagtagatggcggtgcaacgccaaaaccagagtcaaaa
tcaaagaagtccaactcatccacgaccacgtgtgaaaagataacacgcctctacgagctg
ggaccagagccagagaggaagctttgggtggaccgttacttggcctttgtggatgagaaa
gcaatgggcatgaccaacctgcccgccgtggggcgcaagcctctcgacctcttccggctc
tacgtctccgttaaagagatcggaggaatgatgcaggtgaataaaaataagaagtggcgt
gatctagccaccactctgaatgtgggtacgtccagcagtgctgccagttctttgaagaaa
cagtacatccagtgtctgtacgccttcgagtgtaaaatagagcgtggtgaagatcctcct
cctgagatcttcacagacaacaaaaagaaccaggccgctaaagtccagccgccctctcca
gcgtccctctgctccacagccgggtcagggtcccttcagggtccacaaacgccccagtcc
accagcagctcaatggctgaggggggcgaccttaagccccccacgccggcatccactcct
catacccaaatgccccccatgccacctgtccctaggagcagcgtaaatctgcaagacccc
ttctcagacggaagcgaccccgcttttcccagaaagaacttgactcccaactccacctat
cagcccggcatgaacacagcagacttgccagggcgaatgggcccctacgaacccaacaag
gaccccttcagtaacatgcggaaagtcggggagcagtttctgcctgctagccagggccct
aacaacgttgtgggtgaccagcagcagcagcagcagccgccgccgccgccacaacaacag
cctccattcaacagaggaccgcctggggccatgggcacaatgccaatggggcccagacaa
cagtatccctttggaccaggctatgacaggagaccagagcaaggaatggccccagagggc
aacatgggatctggacctcctcagccaaacccgatgatgcctgccaacaccgacacgggg
atgtattctccaaatcgcttcccaccacaacagccacgacatgattcctatggaaatcag
tatcctggacaaggaacgccccctactggttcctacccaaatcagcagcctggaatgtac
ccacaacagggttataagcgtcctgtggagggagggtaccccccatcaaaacgccatgag
gcagagtacagcagttctttccctggtggacagcaaggaccacagcagcagcaacagggt
ggcaccgctgctccatcatcaggacagcaggagccgtacaatcagtacagcggcagcggg
cccttcccgggccctgatcgccgtccacctggccccagcaatcagttcccatttcccttt
ggtcgagaacggatgctggcaacagctggacccaatgctcagcctaacatgcctcctcag
atgatgcagtcggggcctgagggccctcaggggggcatgtggcagggacctcgagacgtg
aactatcagaattaccctagacaaggtgggcctggggggccaacgcagggacccagctac
catggcatgaaccgccctgacgaaatgatgcaatcagaccagcggatgaatcacgacggc
cagtggggggcccagatgggccctcgacagcctccctacggtccagccgggcctggacag
cccatgcctcgttcagtccagtccaactaccagccccctcagggcgtgcagaaccacatt
ccacaggtgtcgagccccgcctccataccccgccccatggaggctcggacatcaccgagc
aaatctccttacacgcacgggttgatgaagatgcaaaaggctggccccccggtacctgca
tcccacattgtgccccctccagtgcagtcgcctctaataaggcgagacatgcctttcccc
ccgggttccgtcgaaggaacacttcctgtccttaagccacgacggagactcaccatgaaa
gatatcggaaccccggaagcctggagagtcatgatgtccttaaagtctggtttattggct
gaaagtacctgggccttagataccatcaatattctgctgtatgatgacagcagcatagca
accttcgatctcaacacgttacctgggctgctggagttggtcgtggagtatttcaggcgc
tgcttgatagaaatcttcggtattctgcgggagtatgaagttggggaccctggtcagagg
actctgcttgatcccgatgccttgaaacgagacctggacaacctggaagaagagccacca
cggttggaggacatggaacaagaggagacggacgacgaagagaaggaggaacacgaaatg
gagcggtcggttcccgtgaaggaggagcaagaccaagagccatgctcgcaaagtcgagat
gagaagacacaagaagagaggaggagcaagggttcttcgtctgaacagacgggctcggtg
caatctctgcctgcccatgagaagcccagacaggccagcaagtttgacaaatttccagtt
aaggtggtacgaaaaagagacccgtttgtggctgcccaattaagtaatcatggtaaagtt
caagagtttgacagcgggctactgcactggagcgcgggagggggcgactctacagaacac
atccagaccctctttgagcctcgcaagaacttcttagagccacgacaacggatacccgtg
ccttcagctctactgaagcgtcggccgctggatgaaaacatacgggggagttgtttgcca
gctgaggaagacagaatgaagcatcaagatgaagaagaaaggccaaaacggagcagtttg
tctgaaaaatcaacagactctgagaaagctggcttaacagttggcaatgacgaggagcaa
cagtctgattcagagacgaagctggccgagaaagggcctaaaagtcaccaagagaataat
agacccattctggcttctggaagtattttcaaccaacaggcacagcagactggcaccatc
ctagaagatgagcctcacagtaaagacgaagggccgctcgtcacgctgtccgactggcag
gactcgctggcgcgtcgctgtatttgtatctcgaatattgtccgcagcctctccttcgtg
ccaggaaatgaccacgagatgtccaaacatcccggactgcttctcatactcgggcacctg
atactgctccaccactggcaccctgagcgcaagcaggcccctctcacctacgagaaggac
gaggattcagatgagggagtggggcggaaggatgagtggtggtgggactgcttggagatc
ttgagagagaacacgctggtcactatggcaaacatttcaggtcaacttgacctttccgcc
taccctgagagcatttgcttacccctgctggacggtcttctgcactgggcggtgtgcccc
tcggcagaggcccaggaccccttcccaaccctgggcccccatagtgctttgtcacctcag
agactggtcctggagactcttagcaaactgagcattcaagataacaatgtggacctcatc
ctggccactccccccttcagtcggttggagaagctgtatggaaacttggtgcggttaatt
ggagacaggaaggttgcagtttgcagggagatggccgtcgtcttactggccaacctggcc
cagggtgacactatggcagcccgagcaatcgctgtccagaagggcagtgtgggcaacttg
ctcggcttcctggaggactctctcgctgccacccagctacaacaaagccagagctctctg
ctgcacctacaagggatgcccttcgagcccaccagcccggacatgatgcggcgagcggcc
cgggctctgcacgccttagccaaggtggaggagaaccactctgagtttacactacacgag
tcgcgactcctcgacctttctgtgtctcccctaatgaactcgctggtttctcacgttatc
tgtgatgtactctttttgatcggccagtcatga
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integrated database retrieval system
