Poecilia mexicana (shortfin molly): 106932028
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Entry
106932028 CDS
T08022
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106932028 (wdtc1)
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
106932028 (wdtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
TPR_19
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
TPR_2
Beta-prop_SPT8
NBCH_WD40
ANAPC3
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
TPR_1
TPR_17
TPR_6
TPR_16
TPR_9
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
106932028
NCBI-ProteinID:
XP_014865977
Ensembl:
ENSPMEG00000010198
UniProt:
A0A3B3X054
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MAAVNITREILHRQIRDRRAPSFQRSFHVTDPFIKRLGLETELQGHTGCVNCLEWNEKGD
LLASGSDDQHAIIWDPFRHKKLTTMHTGHAANIFSVKFLPHTGDRILVTGAADTKVHVHD
LTVKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGIIRQYDLRENSKHSEVLIDLTEF
CGQLAEAKCLAVNPRDNNYLAVGANGPFVRLYDIRMIHNYRKSLSQNTSAAVHTFCDRQK
PIPDGAGQYYVAGHLPVKLRDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTFK
QRPYTFVLPKMCQSTTDVQNGKTTNGIHLPPGHIRFTESKTQSSFTELSPHLEKIKQQAN
NAFARQQWTQAIQLYSLGIHEARGNAMLYGNRAAAYMKRKWDGDHYDALRDCVKALALNP
GHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALDKDIKAALYSKSDSE
DKKGNSSIRFQSFSRKESIPEDEVVLRERSFDYKHRYCGHCNTTTDIKEANFFGSKGQYI
VSGSDDGSFFIWEKETTNLVRILQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRPET
DRDNGRVVEDMEGAAQANQRRMNADPLEVMLLNMGYRITGLRGVGPDGSDDEDSSEGPVQ
CRTS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtcaacatcaccagggagatcctgcacaggcagatcagggacaggagagcg
ccgagcttccaaaggtcttttcatgtgactgaccccttcattaagagacttggactggaa
actgagctccagggccatactggctgtgtgaactgcttggaatggaacgaaaaaggagac
ctgctggcttcgggctcagacgatcaacatgccatcatctgggacccattcagacacaag
aagcttacaactatgcacacgggtcatgctgcaaatatattttctgtcaagttcctgcct
cacactggggacaggatcttggtaacaggtgcagctgacacaaaggtccatgtccatgac
ctgaccgtgaaggaaaccatccacatgttctctgatcacaccaacagagtgaagcgcatt
gccacagcaccaatgtggcccaacaccttctggagtgctgcagaggatggcatcatcagg
cagtatgatctgcgggagaacagtaaacactctgaggttctgatcgacctgacggagttc
tgcggtcagctggctgaagccaagtgtctcgcagtcaatcctcgggacaacaactacctg
gcagtgggagccaacgggccttttgttcgtctctatgacatcaggatgattcacaactac
aggaaatctttgagccagaacacatcagcggctgttcacactttctgtgacaggcagaag
cccatccctgatggagccgggcagtactatgtagcaggccacctgccagtgaaactcaga
gattacaacaaccgcctgagagtcctggtggccacctatgttaccttcagccccgacggc
acagagctgctcgttaacatgggtggggaacaggtctatctttttgacttgacgtttaag
cagaggccgtatacgtttgtgcttccaaaaatgtgccagtcaacaacagatgtccagaat
ggaaagacgacaaacggcatccacttaccgcccggccacattcgctttacagaaagcaaa
acacagtccagttttacggagctttcccctcacttggagaaaataaagcaacaggccaat
aacgcattcgcccgccagcaatggacgcaggccatccagctgtatagcttaggcattcac
gaggccaggggcaacgccatgctgtacgggaaccgggctgcagcctatatgaagcgcaaa
tgggatggagaccattatgacgccctcagggattgcgtgaaggctctcgccctgaacccg
ggacatctgaaagcacatttcaggctggcacggtgtctgtttgagctgaagtatgtggcc
gaggctctggagtgtttggacgatttcaaaggaaagtttcctgagcaagcgcatagcagt
gcctgtgacgccttggataaagacatcaaggctgctctttactccaagtcggattcagaa
gataaaaagggcaacagctccattcgtttccagtcgttcagccggaaagagtccatccct
gaggacgaggtggtgttgagggagcgcagttttgactacaagcacagatactgtggtcac
tgcaacaccaccaccgacatcaaagaggccaacttctttgggagcaagggccagtacatc
gtgagcggctcggatgatggctcatttttcatctgggaaaaagaaacgactaacctggtg
aggatccttcagggagatgagtcaatagtcaactgcctgcagccgcacccaagctactgc
ttcctggctactagtggtattgaccctgtggtacgattatggaaccccagaccagagact
gaccgtgacaacgggcgcgtggtggaggacatggagggagctgctcaggcgaatcagcgg
cgaatgaatgccgatccgttagaggtaatgcttctgaacatgggttatcgcatcacaggc
ctgcgtggcgtcggccccgacggttcagacgacgaggacagctcggaggggccggtgcag
tgcaggacgagctaa
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