Poecilia mexicana (shortfin molly): 106932044
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Entry
106932044 CDS
T08022
Symbol
ddx6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106932044 (ddx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106932044 (ddx6)
03036 Chromosome and associated proteins [BR:
pmei03036
]
106932044 (ddx6)
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106932044 (ddx6)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106932044 (ddx6)
mRNA degradation factors
5'-3' decay
Decapping complex
106932044 (ddx6)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106932044 (ddx6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
ResIII
SNF2-rel_dom
AAA
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
106932044
NCBI-ProteinID:
XP_014866005
Ensembl:
ENSPMEG00000019775
UniProt:
A0A3B3XPW5
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSTTRTENPVILGLSNQNGQLRSSVKPAGAPGGGGGGPQPTQLNQMIKGTINGNSQPAPP
TNAVIKPGDDWKKNLKLPPKDMRIKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSP
IQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDCLQALVIVPTRELALQVS
QICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVNQVQ
MIVLDEADKLLSQDFVVMMEEMLGFLPKQRQILLYSATFPLSVQKFMNAHLQKPYEINLM
EELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSC
FYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYLHR
IGRSGRFGHLGLAINLITYDDRFNLKAIEEQLGTEIKPIPGIIDKSLYVAEYHSETGEEV
KQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaccaggacagagaacccagtgattttgggcttgtccaaccagaacggacag
ctgaggagctcggtgaaacctgcaggggcaccaggtggcggtggaggaggtcctcaacca
acgcagttaaaccagatgataaaaggcacaatcaacggcaattcccagccagcccctcca
acaaacgctgttatcaagcctggagacgactggaagaagaatttaaaattgcccccaaag
gacatgaggatcaaaacttcggatgtgactgcaactaaaggcaatgagtttgaagattat
tgcctaaagagggagctacttatgggaatctttgagatgggctgggaaaagccatctcca
attcaggaggaaagcattcccatcgcactgtcaggcagggatattttggcccgagccaag
aacggcacaggaaagagcggagcctacctcattcccctgctggaacgcatcgacctgaag
aaagactgtttacaggctttggtcatcgtgcccaccagagaactggcactgcaggtcagc
caaatatgcatccaggtcagtaaacacatgggcggcgtgaaggtcatggcgaccacaggg
gggacgaacctccgcgacgacatcatgaggctcgacgaaacggtacatgtggttattgcg
acaccagggaggattttagacctaatcaaaaaaggagtggccaaagtcaatcaggttcag
atgattgttctggatgaagccgacaagctcctgtctcaggactttgtggtcatgatggag
gagatgctgggcttcctgcccaaacagaggcagattttactttactccgccactttcccg
ctcagtgtgcagaagtttatgaacgcacatttgcaaaaaccttatgagatcaacctaatg
gaggagctaacgctgaagggagtgactcagtattatgcttatgtaacagaaaggcaaaag
gtccattgcctcaacaccttgttctccaggctccagatcaaccagtcgataatcttctgt
aactcctctcagagagtggagcttcttgccaagaagatttcccagcttggttattcatgt
ttctacattcatgccaagatgagacaggaacatcgcaaccgtgttttccatgactttaga
aacgggctgtgccgtaacctggtctgcactgacctcttcacgagaggaattgacattcaa
gctgtgaatgttgtgataaactttgattttcctaaactgggagagacgtaccttcaccgc
attgggagatctggacgcttcggccatcttggtttggccatcaacctcatcacgtacgac
gaccgcttcaacctgaaggcaatcgaggagcagctggggacggagatcaagcccatcccc
ggcatcatcgacaagagcctgtacgtggccgagtaccacagtgagaccggcgaagaggtc
aagcagtga
DBGET
integrated database retrieval system
